RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	IRC4	Q03036	179 aa		0.88	□□□□□ -2.27
PRP16	YKR086W	HOT1	Q03213	719 aa		0.88	□□□□□ -2.27
PRP16	YKR086W	ARC18	Q05933	178 aa	Known RBP	0.88	□□□□□ -2.27
PRP16	YKR086W	SYO1	Q07395	620 aa		0.88	□□□□□ -2.27
PRP16	YKR086W	YLR422W	Q06409	1932 aa		0.88	□□□□□ -2.27
PRP16	YKR086W	YMR316C-A	I2HB70	103 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RPL28	P02406	149 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	RAD52	P06778	471 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	CHS1	P08004	1131 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RIP1	P08067	215 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RPL4A	P10664	362 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	CLC1	P17891	233 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	DAL2	P25335	343 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PET18	P25362	215 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PUP3	P25451	205 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	RML2	P32611	393 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
PRP16	YKR086W	SWD2	P36104	329 aa	Predicted RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	MAL32	P38158	584 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PCL7	P40186	285 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	YFR057W	P43625	151 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RPL4B	P49626	362 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	MAL12	P53341	584 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	MTQ1	P53944	314 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	TMA20	P89886	181 aa	Predicted RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	YDR476C	Q03362	224 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	CWC21	Q03375	135 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	SMP3	Q04174	516 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	ALE1	Q08548	619 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PER33	Q12144	273 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PKH2	Q12236	1081 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	STE3	P06783	470 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
PRP16	YKR086W	DBR1	P24309	405 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	ZIP1	P31111	875 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	MEI5	P32489	222 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	SPT10	P35208	640 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	LAS1	P36146	502 aa	Predicted RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	OSH3	P38713	996 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	VPS45	P38932	577 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	CAJ1	P39101	391 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	MRX5	P47007	382 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	YJR030C	P47101	745 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	ECM27	P47144	725 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	STE24	P47154	453 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	TIS11	P47977	285 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	AVT4	P50944	713 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	VEL1	P53058	206 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	CAF40	P53829	373 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	ALG11	P53954	548 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	KTR6	P54070	446 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RHO3	Q00245	231 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	YMR209C	Q03648	457 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RRB1	Q04225	511 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	COQ9	Q05779	260 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	GAS2	Q06135	555 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	CLP1	Q08685	445 aa	Predicted RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	SGT2	Q12118	346 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	RKM5	Q12367	367 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	FOL3	Q12676	427 aa	Predicted RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	RTP1	Q12751	981 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PEP4	P07267	405 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	CLB1	P24868	471 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	BUD5	P25300	642 aa	Predicted RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	YCR051W	P25631	222 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	POP5	P28005	173 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	YEF1	P32622	495 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
PRP16	YKR086W	MRPL4	P36517	319 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RTC2	P38279	296 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RRP4	P38792	359 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	MEP1	P40260	492 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	ASG7	P46993	209 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PMT5	P52867	743 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	YGR018C	P53211	109 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	TWF1	P53250	332 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	MSO1	P53604	210 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	VPS75	P53853	264 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	RHO5	P53879	331 aa	Known RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	KTR5	P53966	522 aa	Predicted RBP	0.87	□□□□□ -2.27
PRP16	YKR086W	SLG1	P54867	378 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	MHR1	Q06630	226 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	SRO7	Q12038	1033 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	FSH3	Q99369	266 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	IZH4	Q99393	312 aa		0.87	□□□□□ -2.27
PRP16	YKR086W	PRP8	P33334	2413 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	REP1	P03871	373 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	NAT1	P12945	854 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	CKA1	P15790	372 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	POL30	P15873	258 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	DAL81	P21657	970 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	SPB1	P25582	841 aa	Predicted RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	CRM1	P30822	1084 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	SMY1	P32364	656 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	MSN2	P33748	704 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	OLA1	P38219	394 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	YBR225W	P38321	900 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	SPL2	P38839	148 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	SEC9	P40357	651 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	VHS2	P40463	436 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms