RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W DIC1Q06143 298 aa3.48□□□□□ -1.85
UBP12YJL197W SAM4Q08985 325 aaKnown RBP3.48□□□□□ -1.85
UBP12YJL197W RKM5Q12367 367 aa3.48□□□□□ -1.85
UBP12YJL197W EDE1P34216 1381 aa3.48□□□□□ -1.85
UBP12YJL197W RAD7P06779 565 aa3.48□□□□□ -1.85
UBP12YJL197W MET16P18408 261 aaPredicted RBP3.48□□□□□ -1.85
UBP12YJL197W ARF2P19146 181 aaKnown RBP3.48□□□□□ -1.85
UBP12YJL197W DAL82P21705 255 aa3.48□□□□□ -1.85
UBP12YJL197W PPZ1P26570 692 aa3.48□□□□□ -1.85
UBP12YJL197W MYO3P36006 1272 aa3.48□□□□□ -1.85
UBP12YJL197W MAL32P38158 584 aa3.48□□□□□ -1.85
UBP12YJL197W MAL12P53341 584 aa3.48□□□□□ -1.85
UBP12YJL197W NUP100Q02629 959 aa3.48□□□□□ -1.85
UBP12YJL197W RTT103Q05543 409 aa3.48□□□□□ -1.85
UBP12YJL197W ATP1P07251 545 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W RPL24BP24000 155 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W DCC1P25559 380 aa3.47□□□□□ -1.85
UBP12YJL197W PBN1P25580 416 aa3.47□□□□□ -1.85
UBP12YJL197W RPS5P26783 225 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W PRS4P38063 326 aaPredicted RBP3.47□□□□□ -1.85
UBP12YJL197W YIR014WP40570 242 aa3.47□□□□□ -1.85
UBP12YJL197W YJL118WP47022 219 aa3.47□□□□□ -1.85
UBP12YJL197W YGR117CP53270 476 aa3.47□□□□□ -1.85
UBP12YJL197W SDO1Q07953 250 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W YOP1Q12402 180 aa3.47□□□□□ -1.85
UBP12YJL197W YPK2P18961 677 aa3.47□□□□□ -1.85
UBP12YJL197W PUT3P25502 979 aaPredicted RBP3.47□□□□□ -1.85
UBP12YJL197W ERG9P29704 444 aa3.47□□□□□ -1.85
UBP12YJL197W YNK1P36010 153 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W LEU5P38702 357 aa3.47□□□□□ -1.85
UBP12YJL197W OKP1P53298 406 aa3.47□□□□□ -1.85
UBP12YJL197W RRN9P53437 365 aa3.47□□□□□ -1.85
UBP12YJL197W SLT2Q00772 484 aa3.47□□□□□ -1.85
UBP12YJL197W MUK1Q02866 612 aa3.47□□□□□ -1.85
UBP12YJL197W RLI1Q03195 608 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W YMR209CQ03648 457 aa3.47□□□□□ -1.85
UBP12YJL197W PAB1P04147 577 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
UBP12YJL197W NHP6BP11633 99 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W COQ1P18900 473 aa3.47□□□□□ -1.85
UBP12YJL197W YSR3P23501 404 aa3.47□□□□□ -1.85
UBP12YJL197W RBK1P25332 333 aa3.47□□□□□ -1.85
UBP12YJL197W ZUO1P32527 433 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W DSE1P40077 573 aa3.47□□□□□ -1.85
UBP12YJL197W TOS2P50078 622 aa3.47□□□□□ -1.85
UBP12YJL197W NAS6P50086 228 aa3.47□□□□□ -1.85
UBP12YJL197W YNR048WP53740 393 aa3.47□□□□□ -1.85
UBP12YJL197W YMR226CQ05016 267 aaKnown RBP3.47□□□□□ -1.85
UBP12YJL197W ALE1Q08548 619 aa3.47□□□□□ -1.85
UBP12YJL197W ADH2P00331 348 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W SPO12P17123 173 aa3.46□□□□□ -1.86
UBP12YJL197W FAR1P21268 830 aa3.46□□□□□ -1.86
UBP12YJL197W YCP4P25349 247 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W YMC1P32331 307 aa3.46□□□□□ -1.86
UBP12YJL197W PHD1P36093 366 aa3.46□□□□□ -1.86
UBP12YJL197W YCR041WP37265 110 aa3.46□□□□□ -1.86
UBP12YJL197W IST2P38250 946 aa3.46□□□□□ -1.86
UBP12YJL197W SDS3P40505 327 aa3.46□□□□□ -1.86
UBP12YJL197W GLG2P47011 380 aa3.46□□□□□ -1.86
UBP12YJL197W SSN8P47821 323 aa3.46□□□□□ -1.86
UBP12YJL197W BET5Q03630 159 aa3.46□□□□□ -1.86
UBP12YJL197W ENT5Q03769 411 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W THI20Q08224 551 aa3.46□□□□□ -1.86
UBP12YJL197W YOR338WQ99326 363 aa3.46□□□□□ -1.86
UBP12YJL197W SPC34P36131 295 aa3.46□□□□□ -1.86
UBP12YJL197W YRB1P41920 201 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W AGP3P43548 558 aa3.46□□□□□ -1.86
UBP12YJL197W ALG11P53954 548 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W MYO5Q04439 1219 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W TPT1Q12272 230 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W YLR111WQ12528 110 aa3.46□□□□□ -1.86
UBP12YJL197W ATP6P00854 259 aa3.46□□□□□ -1.86
UBP12YJL197W DAL81P21657 970 aa3.46□□□□□ -1.86
UBP12YJL197W PPA2P28239 310 aa3.46□□□□□ -1.86
UBP12YJL197W OSH3P38713 996 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W CCT4P39078 528 aaKnown RBP3.46□□□□□ -1.86
UBP12YJL197W ESBP6P53918 673 aa3.46□□□□□ -1.86
UBP12YJL197W SAM50P53969 484 aa3.46□□□□□ -1.86
UBP12YJL197W DIB1Q06819 143 aaPredicted RBP3.46□□□□□ -1.86
UBP12YJL197W YOR029WQ12243 111 aa3.46□□□□□ -1.86
UBP12YJL197W CMC2Q3E7A4 109 aa3.46□□□□□ -1.86
UBP12YJL197W YAR066WP0CX18 203 aa3.45□□□□□ -1.86
UBP12YJL197W YHR214WP0CX19 203 aa3.45□□□□□ -1.86
UBP12YJL197W ZRC1P20107 442 aa3.45□□□□□ -1.86
UBP12YJL197W MCR1P36060 302 aaKnown RBP3.45□□□□□ -1.86
UBP12YJL197W CUE2P36075 443 aaKnown RBP3.45□□□□□ -1.86
UBP12YJL197W YHR182WP38870 785 aa3.45□□□□□ -1.86
UBP12YJL197W FHL1P39521 936 aa3.45□□□□□ -1.86
UBP12YJL197W ISC1P40015 477 aaKnown RBP3.45□□□□□ -1.86
UBP12YJL197W PXR1P53335 271 aaPredicted RBP3.45□□□□□ -1.86
UBP12YJL197W NOP13P53883 403 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
UBP12YJL197W KIN4Q01919 800 aa3.45□□□□□ -1.86
UBP12YJL197W TPO3Q06451 622 aa3.45□□□□□ -1.86
UBP12YJL197W GRS2Q06817 618 aa3.45□□□□□ -1.86
UBP12YJL197W RAD1P06777 1100 aa3.45□□□□□ -1.86
UBP12YJL197W UTR1P21373 530 aa3.45□□□□□ -1.86
UBP12YJL197W VPS1P21576 704 aaKnown RBP3.45□□□□□ -1.86
UBP12YJL197W FAA2P39518 744 aa3.45□□□□□ -1.86
UBP12YJL197W YEL020CP39994 560 aa3.45□□□□□ -1.86
UBP12YJL197W RFC4P40339 323 aaKnown RBP3.45□□□□□ -1.86
UBP12YJL197W AZR1P50080 613 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms