RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W UTP18P40362 594 aaPredicted RBP3.25□□□□□ -1.89
PRP18YGR006W AIP1P46680 615 aaKnown RBP3.25□□□□□ -1.89
PRP18YGR006W DBP9Q06218 594 aaKnown RBP3.25□□□□□ -1.89
PRP18YGR006W MHR1Q06630 226 aa3.25□□□□□ -1.89
PRP18YGR006W YPR091CQ06833 770 aa3.25□□□□□ -1.89
PRP18YGR006W FCY22Q12119 530 aa3.25□□□□□ -1.89
PRP18YGR006W AAT2P23542 418 aaKnown RBP3.24□□□□□ -1.89
PRP18YGR006W POT1P27796 417 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
PRP18YGR006W FUN26P31381 517 aa3.24□□□□□ -1.89
PRP18YGR006W MSK1P32048 576 aa3.24□□□□□ -1.89
PRP18YGR006W NUP2P32499 720 aa3.24□□□□□ -1.89
PRP18YGR006W ECM8P38246 354 aa3.24□□□□□ -1.89
PRP18YGR006W RTC2P38279 296 aa3.24□□□□□ -1.89
PRP18YGR006W CAJ1P39101 391 aa3.24□□□□□ -1.89
PRP18YGR006W YNL208WP40159 199 aaKnown RBP3.24□□□□□ -1.89
PRP18YGR006W LYS12P40495 371 aaKnown RBP3.24□□□□□ -1.89
PRP18YGR006W SNL1P40548 159 aa3.24□□□□□ -1.89
PRP18YGR006W SEC27P41811 889 aaKnown RBP3.24□□□□□ -1.89
PRP18YGR006W CRH1P53301 507 aa3.24□□□□□ -1.89
PRP18YGR006W RET3P53600 189 aa3.24□□□□□ -1.89
PRP18YGR006W TMC1Q08422 150 aaPredicted RBP3.24□□□□□ -1.89
PRP18YGR006W MAS2P11914 482 aa3.23□□□□□ -1.89
PRP18YGR006W ANR2P36090 516 aaPredicted RBP3.23□□□□□ -1.89
PRP18YGR006W SIF2P38262 535 aa3.23□□□□□ -1.89
PRP18YGR006W PTI1P39927 425 aaPredicted RBP3.23□□□□□ -1.89
PRP18YGR006W MIG3P39943 394 aa3.23□□□□□ -1.89
PRP18YGR006W SEC9P40357 651 aa3.23□□□□□ -1.89
PRP18YGR006W EGT2P42835 1041 aa3.23□□□□□ -1.89
PRP18YGR006W ATG18P43601 500 aa3.23□□□□□ -1.89
PRP18YGR006W BNS1P50084 137 aa3.23□□□□□ -1.89
PRP18YGR006W YLR152CP54072 576 aa3.23□□□□□ -1.89
PRP18YGR006W UTP6Q02354 440 aaKnown RBP3.23□□□□□ -1.89
PRP18YGR006W YMR010WQ03687 405 aa3.23□□□□□ -1.89
PRP18YGR006W NAG1Q8TGN9 163 aa3.23□□□□□ -1.89
PRP18YGR006W THR4P16120 514 aaKnown RBP3.22□□□□□ -1.89
PRP18YGR006W HXT1P32465 570 aa3.22□□□□□ -1.89
PRP18YGR006W SPO23P33757 523 aa3.22□□□□□ -1.89
PRP18YGR006W OXA1P39952 402 aa3.22□□□□□ -1.89
PRP18YGR006W DFG10P40526 253 aa3.22□□□□□ -1.89
PRP18YGR006W ABM1P47146 123 aa3.22□□□□□ -1.89
PRP18YGR006W YGR016WP53209 190 aa3.22□□□□□ -1.89
PRP18YGR006W YNL143CP53908 130 aa3.22□□□□□ -1.89
PRP18YGR006W AQR1P53943 586 aa3.22□□□□□ -1.89
PRP18YGR006W YPR078CQ06813 372 aa3.22□□□□□ -1.89
PRP18YGR006W SHS1Q07657 551 aa3.22□□□□□ -1.89
PRP18YGR006W HMS1Q12398 434 aa3.22□□□□□ -1.89
PRP18YGR006W YDL199CQ12407 687 aa3.22□□□□□ -1.89
PRP18YGR006W SSE1P32589 693 aaKnown RBP3.21□□□□□ -1.9
PRP18YGR006W YEL043WP32618 956 aa3.21□□□□□ -1.9
PRP18YGR006W UIP5P36137 443 aa3.21□□□□□ -1.9
PRP18YGR006W LSM12P38828 187 aaKnown RBP3.21□□□□□ -1.9
PRP18YGR006W LCP5P40079 357 aaPredicted RBP3.21□□□□□ -1.9
PRP18YGR006W ATP22P50273 684 aaPredicted RBP3.21□□□□□ -1.9
PRP18YGR006W YMR310CQ04867 317 aaPredicted RBP3.21□□□□□ -1.9
PRP18YGR006W SFG1Q12507 346 aa3.21□□□□□ -1.9
PRP18YGR006W YOR338WQ99326 363 aa3.21□□□□□ -1.9
PRP18YGR006W FSH3Q99369 266 aa3.21□□□□□ -1.9
PRP18YGR006W MAS1P10507 462 aa3.2□□□□□ -1.9
PRP18YGR006W DBR1P24309 405 aaKnown RBP3.2□□□□□ -1.9
PRP18YGR006W HMX1P32339 317 aa3.2□□□□□ -1.9
PRP18YGR006W SMI1P32566 505 aa3.2□□□□□ -1.9
PRP18YGR006W VAM7P32912 316 aa3.2□□□□□ -1.9
PRP18YGR006W YER186CP40101 306 aa3.2□□□□□ -1.9
PRP18YGR006W EFM3P47163 339 aa3.2□□□□□ -1.9
PRP18YGR006W TRF5P48561 642 aaKnown RBP3.2□□□□□ -1.9
PRP18YGR006W CUE3P53137 624 aaKnown RBP3.2□□□□□ -1.9
PRP18YGR006W PRM1P53835 661 aa3.2□□□□□ -1.9
PRP18YGR006W REX2P54964 269 aaKnown RBP3.2□□□□□ -1.9
PRP18YGR006W YET2Q04210 160 aa3.2□□□□□ -1.9
PRP18YGR006W RRB1Q04225 511 aaKnown RBP3.2□□□□□ -1.9
PRP18YGR006W LIP2Q06005 328 aa3.2□□□□□ -1.9
PRP18YGR006W MFG1Q07684 458 aa3.2□□□□□ -1.9
PRP18YGR006W GLE1Q12315 538 aa3.2□□□□□ -1.9
PRP18YGR006W RPS18AP0CX55 146 aaKnown RBP3.19□□□□□ -1.9
PRP18YGR006W RPS18BP0CX56 146 aaPredicted RBP3.19□□□□□ -1.9
PRP18YGR006W TAL1P15019 335 aaKnown RBP3.19□□□□□ -1.9
PRP18YGR006W CDC50P25656 391 aa3.19□□□□□ -1.9
PRP18YGR006W OM14P38325 134 aa3.19□□□□□ -1.9
PRP18YGR006W YHR182WP38870 785 aa3.19□□□□□ -1.9
PRP18YGR006W BAT1P38891 393 aaKnown RBP3.19□□□□□ -1.9
PRP18YGR006W YIL089WP40500 205 aa3.19□□□□□ -1.9
PRP18YGR006W PDR16P53860 351 aaKnown RBP3.19□□□□□ -1.9
PRP18YGR006W SKI8Q02793 397 aaPredicted RBP3.19□□□□□ -1.9
PRP18YGR006W ADD37Q03233 198 aa3.19□□□□□ -1.9
PRP18YGR006W AIM33Q04516 312 aa3.19□□□□□ -1.9
PRP18YGR006W GAT3Q07928 141 aa3.19□□□□□ -1.9
PRP18YGR006W PGC1Q08959 321 aa3.19□□□□□ -1.9
PRP18YGR006W STE3P06783 470 aa3.18□□□□□ -1.9
PRP18YGR006W TPM1P17536 199 aaKnown RBP3.18□□□□□ -1.9
PRP18YGR006W GRR1P24814 1151 aa3.18□□□□□ -1.9
PRP18YGR006W RPL16AP26784 199 aaKnown RBP3.18□□□□□ -1.9
PRP18YGR006W DEP1P31385 405 aa3.18□□□□□ -1.9
PRP18YGR006W FYV8P46949 817 aaKnown RBP3.18□□□□□ -1.9
PRP18YGR006W TIS11P47977 285 aa3.18□□□□□ -1.9
PRP18YGR006W HAL1Q01766 294 aa3.18□□□□□ -1.9
PRP18YGR006W YDR286CQ05530 114 aa3.18□□□□□ -1.9
PRP18YGR006W PSY3Q12318 242 aa3.18□□□□□ -1.9
PRP18YGR006W STE7P06784 515 aa3.17□□□□□ -1.9
PRP18YGR006W VMA2P16140 517 aaKnown RBP3.17□□□□□ -1.9
PRP18YGR006W GIT1P25346 518 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms