RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W STE7P06784 515 aa1.87□□□□□ -2.11
VPS52YDR484W RNA1P11745 407 aaKnown RBP1.87□□□□□ -2.11
VPS52YDR484W ZRC1P20107 442 aa1.87□□□□□ -2.11
VPS52YDR484W YBL028CP38202 106 aa1.87□□□□□ -2.11
VPS52YDR484W LSM12P38828 187 aaKnown RBP1.87□□□□□ -2.11
VPS52YDR484W SEC28P40509 296 aaKnown RBP1.87□□□□□ -2.11
VPS52YDR484W SEC27P41811 889 aaKnown RBP1.87□□□□□ -2.11
VPS52YDR484W EPL1P43572 832 aa1.87□□□□□ -2.11
VPS52YDR484W YIP5P53108 310 aa1.87□□□□□ -2.11
VPS52YDR484W RPL6AQ02326 176 aaKnown RBP1.87□□□□□ -2.11
VPS52YDR484W VHS1Q03785 461 aa1.87□□□□□ -2.11
VPS52YDR484W NOP6Q07623 225 aaKnown RBP1.87□□□□□ -2.11
VPS52YDR484W PRB1P09232 635 aa1.86□□□□□ -2.11
VPS52YDR484W MRPL8P22353 238 aa1.86□□□□□ -2.11
VPS52YDR484W RRP7P25368 297 aaPredicted RBP1.86□□□□□ -2.11
VPS52YDR484W SPO23P33757 523 aa1.86□□□□□ -2.11
VPS52YDR484W SPP381P38282 291 aaPredicted RBP1.86□□□□□ -2.11
VPS52YDR484W WSS1P38838 269 aa1.86□□□□□ -2.11
VPS52YDR484W TIM17P39515 158 aa1.86□□□□□ -2.11
VPS52YDR484W TRF5P48561 642 aaKnown RBP1.86□□□□□ -2.11
VPS52YDR484W KTR6P54070 446 aa1.86□□□□□ -2.11
VPS52YDR484W REX2P54964 269 aaKnown RBP1.86□□□□□ -2.11
VPS52YDR484W MRPS16Q02608 121 aa1.86□□□□□ -2.11
VPS52YDR484W DNL4Q08387 944 aaPredicted RBP1.86□□□□□ -2.11
VPS52YDR484W YDR061WQ12298 539 aa1.86□□□□□ -2.11
VPS52YDR484W FOL3Q12676 427 aaPredicted RBP1.86□□□□□ -2.11
VPS52YDR484W RPS18AP0CX55 146 aaKnown RBP1.85□□□□□ -2.11
VPS52YDR484W RPS18BP0CX56 146 aaPredicted RBP1.85□□□□□ -2.11
VPS52YDR484W GIT1P25346 518 aa1.85□□□□□ -2.11
VPS52YDR484W PUP2P32379 260 aa1.85□□□□□ -2.11
VPS52YDR484W MRPS9P38120 278 aa1.85□□□□□ -2.11
VPS52YDR484W PFS1P38872 237 aa1.85□□□□□ -2.11
VPS52YDR484W IGD1P43598 195 aa1.85□□□□□ -2.11
VPS52YDR484W YPS5P53057 165 aa1.85□□□□□ -2.11
VPS52YDR484W CWC22P53333 577 aaKnown RBP1.85□□□□□ -2.11
VPS52YDR484W YFH1Q07540 174 aa1.85□□□□□ -2.11
VPS52YDR484W CBP6P07253 162 aaPredicted RBP1.85□□□□□ -2.11
VPS52YDR484W TPS1Q00764 495 aaKnown RBP1.85□□□□□ -2.11
VPS52YDR484W RCF1Q03713 159 aa1.85□□□□□ -2.11
VPS52YDR484W HSP82P02829 709 aaKnown RBP1.84□□□□□ -2.11
VPS52YDR484W SOL2P37262 315 aa1.84□□□□□ -2.11
VPS52YDR484W YHR177WP38867 453 aa1.84□□□□□ -2.11
VPS52YDR484W SEO1P39709 593 aa1.84□□□□□ -2.11
VPS52YDR484W ALD5P40047 520 aaKnown RBP1.84□□□□□ -2.11
VPS52YDR484W ABM1P47146 123 aa1.84□□□□□ -2.11
VPS52YDR484W ECM11Q04110 302 aa1.84□□□□□ -2.11
VPS52YDR484W MSC3Q05812 728 aa1.84□□□□□ -2.11
VPS52YDR484W MCH1Q07376 486 aa1.84□□□□□ -2.11
VPS52YDR484W YPQ1Q12010 308 aa1.84□□□□□ -2.11
VPS52YDR484W RPL16AP26784 199 aaKnown RBP1.83□□□□□ -2.12
VPS52YDR484W EFB1P32471 206 aaKnown RBP1.83□□□□□ -2.12
VPS52YDR484W BMT2P38278 337 aa1.83□□□□□ -2.12
VPS52YDR484W YGL262WP53054 175 aa1.83□□□□□ -2.12
VPS52YDR484W VHT1P53241 593 aa1.83□□□□□ -2.12
VPS52YDR484W YHC1Q05900 231 aaKnown RBP1.83□□□□□ -2.12
VPS52YDR484W SHS1Q07657 551 aa1.83□□□□□ -2.12
VPS52YDR484W TFB5Q3E7C1 72 aaPredicted RBP1.83□□□□□ -2.12
VPS52YDR484W YBL111CQ3E7Y5 667 aa1.83□□□□□ -2.12
VPS52YDR484W HEM4P06174 275 aa1.83□□□□□ -2.12
VPS52YDR484W CMK2P22517 447 aa1.83□□□□□ -2.12
VPS52YDR484W LDS1P31379 325 aa1.83□□□□□ -2.12
VPS52YDR484W SSE1P32589 693 aaKnown RBP1.83□□□□□ -2.12
VPS52YDR484W RXT2P38255 430 aa1.83□□□□□ -2.12
VPS52YDR484W PEX22P39718 180 aa1.83□□□□□ -2.12
VPS52YDR484W SEC9P40357 651 aa1.83□□□□□ -2.12
VPS52YDR484W LYS12P40495 371 aaKnown RBP1.83□□□□□ -2.12
VPS52YDR484W CIN2P46670 268 aa1.83□□□□□ -2.12
VPS52YDR484W MPS2P53159 387 aa1.83□□□□□ -2.12
VPS52YDR484W PEX27Q08580 376 aa1.83□□□□□ -2.12
VPS52YDR484W SFM1Q12314 213 aa1.83□□□□□ -2.12
VPS52YDR484W HIF1Q12373 385 aa1.83□□□□□ -2.12
VPS52YDR484W SKS1Q12505 502 aa1.83□□□□□ -2.12
VPS52YDR484W MAS2P11914 482 aa1.82□□□□□ -2.12
VPS52YDR484W DAD2P36162 133 aa1.82□□□□□ -2.12
VPS52YDR484W SNL1P40548 159 aa1.82□□□□□ -2.12
VPS52YDR484W KEG1P43614 200 aa1.82□□□□□ -2.12
VPS52YDR484W RET3P53600 189 aa1.82□□□□□ -2.12
VPS52YDR484W EOS1P53938 366 aa1.82□□□□□ -2.12
VPS52YDR484W PRP38Q00723 242 aaPredicted RBP1.82□□□□□ -2.12
VPS52YDR484W ENT5Q03769 411 aaKnown RBP1.82□□□□□ -2.12
VPS52YDR484W YDL109CQ12103 647 aa1.82□□□□□ -2.12
VPS52YDR484W LDB17Q12342 491 aa1.82□□□□□ -2.12
VPS52YDR484W YOR338WQ99326 363 aa1.82□□□□□ -2.12
VPS52YDR484W CCH1P50077 2039 aa1.82□□□□□ -2.12
VPS52YDR484W ADH1P00330 348 aaKnown RBP1.81□□□□□ -2.12
VPS52YDR484W ASP3-2P0CX77 362 aa1.81□□□□□ -2.12
VPS52YDR484W ASP3-3P0CX78 362 aa1.81□□□□□ -2.12
VPS52YDR484W ASP3-4P0CX79 362 aa1.81□□□□□ -2.12
VPS52YDR484W ASP3-1P0CZ17 362 aa1.81□□□□□ -2.12
VPS52YDR484W CHA1P25379 360 aaKnown RBP1.81□□□□□ -2.12
VPS52YDR484W PSO2P30620 661 aa1.81□□□□□ -2.12
VPS52YDR484W MSK1P32048 576 aa1.81□□□□□ -2.12
VPS52YDR484W DPH2P32461 534 aa1.81□□□□□ -2.12
VPS52YDR484W YKR015CP36111 568 aa1.81□□□□□ -2.12
VPS52YDR484W YHR182WP38870 785 aa1.81□□□□□ -2.12
VPS52YDR484W FSH2Q05015 223 aa1.81□□□□□ -2.12
VPS52YDR484W GAT3Q07928 141 aa1.81□□□□□ -2.12
VPS52YDR484W MCT1Q12283 360 aa1.81□□□□□ -2.12
VPS52YDR484W YDL012CQ12489 107 aa1.81□□□□□ -2.12
VPS52YDR484W MSP1P28737 362 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms