RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	YPR172W	Q06608	200 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	SIA1	Q12212	622 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	TPT1	Q12272	230 aa	Known RBP	5.14	□□□□□ -1.59
SNF11	YDR073W	PNS1	Q12412	539 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	PRP46	Q12417	451 aa	Predicted RBP	5.14	□□□□□ -1.59
SNF11	YDR073W	POM152	P39685	1337 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	TOA2	P32774	122 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	PRS1	P32895	427 aa	Known RBP	5.13	□□□□□ -1.59
SNF11	YDR073W	YKL162C	P36052	402 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	FHL1	P39521	936 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	AIM10	P39965	576 aa	Known RBP	5.13	□□□□□ -1.59
SNF11	YDR073W	SIM1	P40472	476 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	FMC1	P40491	155 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	INA22	P40576	216 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	AZF1	P41696	914 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	FMP33	P46998	180 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	MRX5	P47007	382 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	COX16	P47081	118 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	NAS6	P50086	228 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	TAF6	P53040	516 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	RRN9	P53437	365 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	COX20	Q04935	205 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	YAP7	Q08182	245 aa		5.13	□□□□□ -1.59
SNF11	YDR073W	RRP12	Q12754	1228 aa	Known RBP	5.13	□□□□□ -1.59
SNF11	YDR073W	CFT1	Q06632	1357 aa	Known RBP	5.13	□□□□□ -1.59
SNF11	YDR073W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
SNF11	YDR073W	RPL42A	P0CX27	106 aa	Known RBP	5.12	□□□□□ -1.59
SNF11	YDR073W	RPL42B	P0CX28	106 aa	Known RBP	5.12	□□□□□ -1.59
SNF11	YDR073W	MER1	P16523	270 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	UTR1	P21373	530 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	MBR1	P23493	339 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	ILV6	P25605	309 aa	Known RBP	5.12	□□□□□ -1.59
SNF11	YDR073W	YEF1	P32622	495 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	IMP3	P32899	183 aa	Predicted RBP	5.12	□□□□□ -1.59
SNF11	YDR073W	LOS1	P33418	1100 aa	Predicted RBP	5.12	□□□□□ -1.59
SNF11	YDR073W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
SNF11	YDR073W	MCR1	P36060	302 aa	Known RBP	5.12	□□□□□ -1.59
SNF11	YDR073W	YHR182W	P38870	785 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	RBG1	P39729	369 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	ALD5	P40047	520 aa	Known RBP	5.12	□□□□□ -1.59
SNF11	YDR073W	RTR1	P40084	226 aa	Predicted RBP	5.12	□□□□□ -1.59
SNF11	YDR073W	AZR1	P50080	613 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	MNT4	P53745	580 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	BET4	Q00618	327 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	SRL4	Q03085	281 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	CTS2	Q06350	511 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	BSC6	Q08280	497 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	AHC1	Q12433	566 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	UBA3	Q99344	299 aa		5.12	□□□□□ -1.59
SNF11	YDR073W	SAM2	P19358	384 aa	Known RBP	5.11	□□□□□ -1.59
SNF11	YDR073W	ITR1	P30605	584 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	ACB1	P31787	87 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	ARO4	P32449	370 aa	Known RBP	5.11	□□□□□ -1.59
SNF11	YDR073W	GLC7	P32598	312 aa	Known RBP	5.11	□□□□□ -1.59
SNF11	YDR073W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
SNF11	YDR073W	YKL071W	P36086	256 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	HIS2	P38635	335 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	GEP4	P38812	185 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	CCT4	P39078	528 aa	Known RBP	5.11	□□□□□ -1.59
SNF11	YDR073W	DHH1	P39517	506 aa	Known RBP	5.11	□□□□□ -1.59
SNF11	YDR073W	QRI1	P43123	477 aa	Known RBP	5.11	□□□□□ -1.59
SNF11	YDR073W	GUF1	P46943	645 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	SFH5	P47008	294 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	YJL118W	P47022	219 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	AIM24	P47127	394 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	AVT4	P50944	713 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	TIM21	P53220	239 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	LST7	P53237	242 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	PXR1	P53335	271 aa	Predicted RBP	5.11	□□□□□ -1.59
SNF11	YDR073W	TRM112	P53738	135 aa	Predicted RBP	5.11	□□□□□ -1.59
SNF11	YDR073W	GIM3	P53900	129 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	STP1	Q00947	519 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	CCE1	Q03702	353 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	YPL199C	Q08954	240 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	YPQ1	Q12010	308 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	ATX2	Q12067	313 aa		5.11	□□□□□ -1.59
SNF11	YDR073W	RAD1	P06777	1100 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	PRB1	P09232	635 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	FRS2	P15625	503 aa	Known RBP	5.1	□□□□□ -1.59
SNF11	YDR073W	FAR1	P21268	830 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	YSR3	P23501	404 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	RBK1	P25332	333 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	YCR016W	P25617	290 aa	Known RBP	5.1	□□□□□ -1.59
SNF11	YDR073W	POP5	P28005	173 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	TMT1	P32643	299 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	SIP2	P34164	415 aa	Known RBP	5.1	□□□□□ -1.59
SNF11	YDR073W	IST2	P38250	946 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	ATG7	P38862	630 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	MST28	P39552	234 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	PCL6	P40038	420 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	YER085C	P40058	173 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	SHQ1	P40486	507 aa	Predicted RBP	5.1	□□□□□ -1.59
SNF11	YDR073W	MSS2	P40990	351 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	BIO3	P50277	480 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	KAP114	P53067	1004 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	ARK1	P53974	638 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	GMC2	Q06201	188 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	YRM1	Q12340	786 aa		5.1	□□□□□ -1.59
SNF11	YDR073W	MSF1	P08425	469 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	TUB1	P09733	447 aa	Known RBP	5.09	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms