RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YDR344CQ05510 147 aa5.31□□□□□ -1.56
PDB1YBR221C POS5Q06892 414 aa5.31□□□□□ -1.56
PDB1YBR221C YOR365CQ08844 703 aa5.31□□□□□ -1.56
PDB1YBR221C FRE5Q08908 694 aa5.31□□□□□ -1.56
PDB1YBR221C CSM4Q08955 156 aa5.31□□□□□ -1.56
PDB1YBR221C ELG1Q12050 791 aa5.31□□□□□ -1.56
PDB1YBR221C PER33Q12144 273 aa5.31□□□□□ -1.56
PDB1YBR221C PKH2Q12236 1081 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C PRS5Q12265 496 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C RRI1Q12468 440 aa5.31□□□□□ -1.56
PDB1YBR221C RMD5Q12508 421 aa5.31□□□□□ -1.56
PDB1YBR221C YBR255C-AQ3E776 120 aa5.31□□□□□ -1.56
PDB1YBR221C QCR7P00128 127 aa5.3□□□□□ -1.56
PDB1YBR221C ADH2P00331 348 aaKnown RBP5.3□□□□□ -1.56
PDB1YBR221C YBR121C-AP0C5L4 52 aa5.3□□□□□ -1.56
PDB1YBR221C YLL053CP0CD98 152 aa5.3□□□□□ -1.56
PDB1YBR221C MAS2P11914 482 aa5.3□□□□□ -1.56
PDB1YBR221C PDE1P22434 369 aa5.3□□□□□ -1.56
PDB1YBR221C PUP3P25451 205 aaKnown RBP5.3□□□□□ -1.56
PDB1YBR221C PUT3P25502 979 aaPredicted RBP5.3□□□□□ -1.56
PDB1YBR221C YPK3P38070 525 aa5.3□□□□□ -1.56
PDB1YBR221C DUG2P38149 878 aa5.3□□□□□ -1.56
PDB1YBR221C IMD2P38697 523 aaKnown RBP5.3□□□□□ -1.56
PDB1YBR221C TRM5P38793 499 aa5.3□□□□□ -1.56
PDB1YBR221C PTC7P38797 343 aa5.3□□□□□ -1.56
PDB1YBR221C GPI16P38875 610 aa5.3□□□□□ -1.56
PDB1YBR221C PRK1P40494 810 aa5.3□□□□□ -1.56
PDB1YBR221C UTP25P40498 721 aaKnown RBP5.3□□□□□ -1.56
PDB1YBR221C PFA3P42836 336 aa5.3□□□□□ -1.56
PDB1YBR221C IRC7P43623 340 aa5.3□□□□□ -1.56
PDB1YBR221C YDL186WP48568 277 aa5.3□□□□□ -1.56
PDB1YBR221C STB4P50104 949 aa5.3□□□□□ -1.56
PDB1YBR221C CWC23P52868 283 aaPredicted RBP5.3□□□□□ -1.56
PDB1YBR221C YGL204CP53089 101 aa5.3□□□□□ -1.56
PDB1YBR221C IMO32P53219 342 aa5.3□□□□□ -1.56
PDB1YBR221C LSC2P53312 427 aa5.3□□□□□ -1.56
PDB1YBR221C USA1Q03714 838 aa5.3□□□□□ -1.56
PDB1YBR221C TPO1Q07824 586 aa5.3□□□□□ -1.56
PDB1YBR221C RSA1Q08932 381 aa5.3□□□□□ -1.56
PDB1YBR221C AFT2Q08957 416 aa5.3□□□□□ -1.56
PDB1YBR221C ATP1P07251 545 aaKnown RBP5.29□□□□□ -1.56
PDB1YBR221C RNR3P21672 869 aaKnown RBP5.29□□□□□ -1.56
PDB1YBR221C FUB1P25659 250 aa5.29□□□□□ -1.56
PDB1YBR221C RFA2P26754 273 aaKnown RBP5.29□□□□□ -1.56
PDB1YBR221C NRP1P32770 719 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
PDB1YBR221C OPY1P38271 328 aa5.29□□□□□ -1.56
PDB1YBR221C ARO9P38840 513 aaPredicted RBP5.29□□□□□ -1.56
PDB1YBR221C SRP14P38985 146 aa5.29□□□□□ -1.56
PDB1YBR221C ACO2P39533 789 aa5.29□□□□□ -1.56
PDB1YBR221C JLP2P40206 208 aa5.29□□□□□ -1.56
PDB1YBR221C YKE4P40544 346 aa5.29□□□□□ -1.56
PDB1YBR221C SNL1P40548 159 aa5.29□□□□□ -1.56
PDB1YBR221C SWP82P43554 623 aa5.29□□□□□ -1.56
PDB1YBR221C TAX4P47030 604 aa5.29□□□□□ -1.56
PDB1YBR221C RPC17P47076 161 aa5.29□□□□□ -1.56
PDB1YBR221C MTQ1P53944 314 aa5.29□□□□□ -1.56
PDB1YBR221C DOT1Q04089 582 aaKnown RBP5.29□□□□□ -1.56
PDB1YBR221C BUR2Q05949 395 aa5.29□□□□□ -1.56
PDB1YBR221C RCL1Q08096 367 aaPredicted RBP5.29□□□□□ -1.56
PDB1YBR221C AAD15Q08361 143 aa5.29□□□□□ -1.56
PDB1YBR221C RPN8Q08723 338 aaKnown RBP5.29□□□□□ -1.56
PDB1YBR221C YPL216WQ08964 1102 aa5.29□□□□□ -1.56
PDB1YBR221C ZPS1Q12512 249 aa5.29□□□□□ -1.56
PDB1YBR221C YKL183C-AQ3E765 70 aa5.29□□□□□ -1.56
PDB1YBR221C HIS4P00815 799 aaKnown RBP5.28□□□□□ -1.56
PDB1YBR221C NFT1P0CE68 1218 aa5.28□□□□□ -1.56
PDB1YBR221C MRP1P10662 321 aaKnown RBP5.28□□□□□ -1.56
PDB1YBR221C PDC5P16467 563 aaKnown RBP5.28□□□□□ -1.56
PDB1YBR221C CHA1P25379 360 aaKnown RBP5.28□□□□□ -1.56
PDB1YBR221C IDH1P28834 360 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
PDB1YBR221C PRP21P32524 280 aaPredicted RBP5.28□□□□□ -1.56
PDB1YBR221C YSC83P32792 385 aa5.28□□□□□ -1.56
PDB1YBR221C PDR3P33200 976 aa5.28□□□□□ -1.56
PDB1YBR221C SPT10P35208 640 aa5.28□□□□□ -1.56
PDB1YBR221C NTR2P36118 322 aaPredicted RBP5.28□□□□□ -1.56
PDB1YBR221C MRPL7P36519 292 aa5.28□□□□□ -1.56
PDB1YBR221C URA8P38627 578 aaPredicted RBP5.28□□□□□ -1.56
PDB1YBR221C LNP1P38878 278 aa5.28□□□□□ -1.56
PDB1YBR221C UIP3P39547 235 aa5.28□□□□□ -1.56
PDB1YBR221C YER184CP39961 794 aa5.28□□□□□ -1.56
PDB1YBR221C YNL194CP40169 301 aa5.28□□□□□ -1.56
PDB1YBR221C PAC11P40960 533 aa5.28□□□□□ -1.56
PDB1YBR221C YJR056CP47115 236 aa5.28□□□□□ -1.56
PDB1YBR221C SSN8P47821 323 aa5.28□□□□□ -1.56
PDB1YBR221C ALG11P53954 548 aaKnown RBP5.28□□□□□ -1.56
PDB1YBR221C PRP38Q00723 242 aaPredicted RBP5.28□□□□□ -1.56
PDB1YBR221C MMT1Q03218 510 aa5.28□□□□□ -1.56
PDB1YBR221C RIM13Q03792 727 aa5.28□□□□□ -1.56
PDB1YBR221C TPP1Q03796 238 aa5.28□□□□□ -1.56
PDB1YBR221C ARR3Q06598 404 aa5.28□□□□□ -1.56
PDB1YBR221C RUP1Q12242 671 aa5.28□□□□□ -1.56
PDB1YBR221C YCL012CQ8J0M4 134 aa5.28□□□□□ -1.56
PDB1YBR221C COX3P00420 269 aa5.27□□□□□ -1.57
PDB1YBR221C PGK1P00560 416 aaKnown RBP5.27□□□□□ -1.57
PDB1YBR221C RHO2P06781 192 aa5.27□□□□□ -1.57
PDB1YBR221C ERS1P17261 260 aa5.27□□□□□ -1.57
PDB1YBR221C YMR31P19955 123 aa5.27□□□□□ -1.57
PDB1YBR221C SRP54P20424 541 aaKnown RBP5.27□□□□□ -1.57
PDB1YBR221C RPO26P20435 155 aa5.27□□□□□ -1.57
PDB1YBR221C DBR1P24309 405 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms