RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W RET3P53600 189 aa1.92□□□□□ -2.1
VPS8YAL002W CUS2P53830 285 aaPredicted RBP1.92□□□□□ -2.1
VPS8YAL002W RTC4P53850 401 aa1.92□□□□□ -2.1
VPS8YAL002W SSK1Q07084 712 aa1.92□□□□□ -2.1
VPS8YAL002W AAD15Q08361 143 aa1.92□□□□□ -2.1
VPS8YAL002W RAX1Q08760 435 aa1.92□□□□□ -2.1
VPS8YAL002W FAB1P34756 2278 aa1.92□□□□□ -2.1
VPS8YAL002W DST1P07273 309 aa1.92□□□□□ -2.1
VPS8YAL002W OSM1P21375 501 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W CWP1P28319 239 aa1.92□□□□□ -2.1
VPS8YAL002W SAC1P32368 623 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W RAD23P32628 398 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W IMP3P32899 183 aaPredicted RBP1.92□□□□□ -2.1
VPS8YAL002W SKG6P32900 734 aaPredicted RBP1.92□□□□□ -2.1
VPS8YAL002W YNK1P36010 153 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W PRP39P39682 629 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W LCP5P40079 357 aaPredicted RBP1.92□□□□□ -2.1
VPS8YAL002W TAF6P53040 516 aa1.92□□□□□ -2.1
VPS8YAL002W RMR1P53060 241 aa1.92□□□□□ -2.1
VPS8YAL002W YGL082WP53155 381 aa1.92□□□□□ -2.1
VPS8YAL002W RPM2Q02773 1202 aa1.92□□□□□ -2.1
VPS8YAL002W ENT5Q03769 411 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W COX20Q04935 205 aa1.92□□□□□ -2.1
VPS8YAL002W YMR226CQ05016 267 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W RTT103Q05543 409 aa1.92□□□□□ -2.1
VPS8YAL002W MRPL35Q06678 367 aa1.92□□□□□ -2.1
VPS8YAL002W SYO1Q07395 620 aa1.92□□□□□ -2.1
VPS8YAL002W PEX27Q08580 376 aa1.92□□□□□ -2.1
VPS8YAL002W YOR012WQ12351 137 aa1.92□□□□□ -2.1
VPS8YAL002W SSK22P25390 1331 aaPredicted RBP1.91□□□□□ -2.1
VPS8YAL002W RAD3P06839 778 aa1.91□□□□□ -2.1
VPS8YAL002W FRS2P15625 503 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W COQ1P18900 473 aa1.91□□□□□ -2.1
VPS8YAL002W YCP4P25349 247 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W PRO3P32263 286 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W YKL071WP36086 256 aa1.91□□□□□ -2.1
VPS8YAL002W VPS51P36116 164 aa1.91□□□□□ -2.1
VPS8YAL002W QDR3P38227 689 aa1.91□□□□□ -2.1
VPS8YAL002W RRP3P38712 501 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W RFC4P40339 323 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W SDS3P40505 327 aa1.91□□□□□ -2.1
VPS8YAL002W YIL060WP40519 144 aa1.91□□□□□ -2.1
VPS8YAL002W YGR117CP53270 476 aa1.91□□□□□ -2.1
VPS8YAL002W IZH1Q03419 316 aa1.91□□□□□ -2.1
VPS8YAL002W TAF12Q03761 539 aa1.91□□□□□ -2.1
VPS8YAL002W RRP17Q04031 235 aaPredicted RBP1.91□□□□□ -2.1
VPS8YAL002W IVY1Q04934 453 aa1.91□□□□□ -2.1
VPS8YAL002W GGA1Q06336 557 aa1.91□□□□□ -2.1
VPS8YAL002W BSC6Q08280 497 aa1.91□□□□□ -2.1
VPS8YAL002W RPS10AQ08745 105 aaPredicted RBP1.91□□□□□ -2.1
VPS8YAL002W BTS1Q12051 335 aa1.91□□□□□ -2.1
VPS8YAL002W AIM45Q12480 344 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W Q0010Q9ZZX9 128 aa1.91□□□□□ -2.1
VPS8YAL002W LYS2P07702 1392 aa1.91□□□□□ -2.1
VPS8YAL002W PEP4P07267 405 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W NFT1P0CE68 1218 aa1.91□□□□□ -2.1
VPS8YAL002W ZRC1P20107 442 aa1.91□□□□□ -2.1
VPS8YAL002W GSY2P27472 705 aa1.91□□□□□ -2.1
VPS8YAL002W CIN8P27895 1000 aa1.91□□□□□ -2.1
VPS8YAL002W ATP11P32453 318 aa1.91□□□□□ -2.1
VPS8YAL002W YSC83P32792 385 aa1.91□□□□□ -2.1
VPS8YAL002W SHP1P34223 423 aa1.91□□□□□ -2.1
VPS8YAL002W RRN10P38204 145 aa1.91□□□□□ -2.1
VPS8YAL002W SMF2P38778 549 aa1.91□□□□□ -2.1
VPS8YAL002W YER079WP40052 210 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W UTP25P40498 721 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W DSN1P40568 576 aa1.91□□□□□ -2.1
VPS8YAL002W YRB1P41920 201 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W YJR011CP47086 261 aaPredicted RBP1.91□□□□□ -2.1
VPS8YAL002W HMS2P47175 358 aa1.91□□□□□ -2.1
VPS8YAL002W IMD3P50095 523 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W KTR5P53966 522 aaPredicted RBP1.91□□□□□ -2.1
VPS8YAL002W YMR209CQ03648 457 aa1.91□□□□□ -2.1
VPS8YAL002W GIS1Q03833 894 aa1.91□□□□□ -2.1
VPS8YAL002W YDR387CQ04162 555 aa1.91□□□□□ -2.1
VPS8YAL002W UBX2Q04228 584 aa1.91□□□□□ -2.1
VPS8YAL002W BUR2Q05949 395 aa1.91□□□□□ -2.1
VPS8YAL002W GMC2Q06201 188 aa1.91□□□□□ -2.1
VPS8YAL002W PAM18Q07914 168 aa1.91□□□□□ -2.1
VPS8YAL002W DNL4Q08387 944 aaPredicted RBP1.91□□□□□ -2.1
VPS8YAL002W YLL056CQ12177 298 aa1.91□□□□□ -2.1
VPS8YAL002W NCE102Q12207 173 aaRIP-Chip data1.91□□□□□ -2.1not detected
VPS8YAL002W FRE7Q12333 620 aa1.91□□□□□ -2.1
VPS8YAL002W RRI1Q12468 440 aa1.91□□□□□ -2.1
VPS8YAL002W NHP6BP11633 99 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W RPL24BP24000 155 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W RRT12P25381 491 aa1.91□□□□□ -2.1
VPS8YAL002W ACH1P32316 526 aa1.91□□□□□ -2.1
VPS8YAL002W GCG1P32656 232 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W PTR2P32901 601 aa1.91□□□□□ -2.1
VPS8YAL002W TSA1P34760 196 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W MAK5P38112 773 aaPredicted RBP1.91□□□□□ -2.1
VPS8YAL002W RTC2P38279 296 aa1.91□□□□□ -2.1
VPS8YAL002W YMR262WP38430 313 aa1.91□□□□□ -2.1
VPS8YAL002W INM1P38710 295 aa1.91□□□□□ -2.1
VPS8YAL002W MTC6P38849 526 aa1.91□□□□□ -2.1
VPS8YAL002W ISC1P40015 477 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W BNA3P47039 444 aaKnown RBP1.91□□□□□ -2.1
VPS8YAL002W NUP53Q03790 475 aa1.91□□□□□ -2.1
VPS8YAL002W KRE28Q04431 385 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms