RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	YSC83	P32792	385 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	GPX2	P38143	162 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	YNL208W	P40159	199 aa	Known RBP	0.71	□□□□□ -2.3
SEC8	YPR055W	EFM4	P40516	257 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	MST27	P53176	234 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	PLP2	Q12017	286 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	RPS14A	P06367	137 aa	Known RBP	0.71	□□□□□ -2.3
SEC8	YPR055W	ALG1	P16661	449 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	QDR3	P38227	689 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	SPP381	P38282	291 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC8	YPR055W	INM1	P38710	295 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	STN1	P38960	494 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.71	□□□□□ -2.3	not detected
SEC8	YPR055W	RPS14B	P39516	138 aa	Known RBP	0.71	□□□□□ -2.3
SEC8	YPR055W	SEO1	P39709	593 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	LCB2	P40970	561 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	YMR102C	Q03177	834 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	YLR456W	Q06199	204 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	AEP3	Q12089	606 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	SFI1	Q12369	946 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	PDE2	P06776	526 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	CMK2	P22517	447 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	CDC50	P25656	391 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	PHO91	P27514	894 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	COX13	P32799	129 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	MNL1	P38888	796 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	YPS6	P40583	537 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	ABM1	P47146	123 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	SRB7	P47822	140 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	YGL262W	P53054	175 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	YGR111W	P53265	400 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	RPT4	P53549	437 aa	Known RBP	0.71	□□□□□ -2.3
SEC8	YPR055W	MEH1	Q02205	184 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	YHC1	Q05900	231 aa	Known RBP	0.71	□□□□□ -2.3
SEC8	YPR055W	YPR091C	Q06833	770 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	SMC5	Q08204	1093 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	DCI1	Q08558	271 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	FCY22	Q12119	530 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	RNH203	Q12338	110 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	JID1	Q12350	301 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	TPK3	P05986	398 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	PIS1	P06197	220 aa	Known RBP	0.7	□□□□□ -2.3
SEC8	YPR055W	SLM5	P25345	492 aa	Known RBP	0.7	□□□□□ -2.3
SEC8	YPR055W	RRP1	P35178	278 aa	Predicted RBP	0.7	□□□□□ -2.3
SEC8	YPR055W	YHR177W	P38867	453 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	YIP5	P53108	310 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	DNL4	Q08387	944 aa	Predicted RBP	0.7	□□□□□ -2.3
SEC8	YPR055W	UAF30	Q08747	228 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	PRB1	P09232	635 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	CPR2	P23285	205 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	YEF1	P32622	495 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.7	□□□□□ -2.3	not detected
SEC8	YPR055W	ANR2	P36090	516 aa	Predicted RBP	0.7	□□□□□ -2.3
SEC8	YPR055W	PFF1	P38244	976 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	GEP4	P38812	185 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	NOC2	P39744	710 aa	Known RBP	0.7	□□□□□ -2.3
SEC8	YPR055W	YER184C	P39961	794 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	ATM1	P40416	690 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	MAM33	P40513	266 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	IGD1	P43598	195 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	MDG1	P53885	366 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	PRP42	Q03776	544 aa	Known RBP	0.7	□□□□□ -2.3
SEC8	YPR055W	NDE2	Q07500	545 aa		0.7	□□□□□ -2.3
SEC8	YPR055W	TCB3	Q03640	1545 aa	Known RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.69	□□□□□ -2.3	not detected
SEC8	YPR055W	PDC2	P32896	925 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	CTK3	P46963	296 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	YPS5	P53057	165 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	YGR117C	P53270	476 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	MKC7	P53379	596 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	YDR115W	Q04598	105 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	BUG1	Q12191	341 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	YDL199C	Q12407	687 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	SMC6	Q12749	1114 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	ESC1	Q03661	1658 aa	Known RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	NIP1	P32497	812 aa	Known RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	MID2	P36027	376 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	SLX1	P38324	304 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	OM14	P38325	134 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	STE24	P47154	453 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	ATP22	P50273	684 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	TRM112	P53738	135 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	ENT5	Q03769	411 aa	Known RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	RPN9	Q04062	393 aa	Known RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	MCH1	Q07376	486 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	GAT3	Q07928	141 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	YPQ1	Q12010	308 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	MCT1	Q12283	360 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	SNU66	Q12420	587 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	MDS3	P53094	1487 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	PUT4	P15380	627 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	ZRC1	P20107	442 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	VMA8	P32610	256 aa	Known RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	GPI18	P38211	433 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	SRP72	P38688	640 aa	Known RBP	0.69	□□□□□ -2.3
SEC8	YPR055W	TOM22	P49334	152 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	RSC1	P53236	928 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	RRN9	P53437	365 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	SPC19	Q03954	165 aa		0.69	□□□□□ -2.3
SEC8	YPR055W	TIR4	Q12218	487 aa	Predicted RBP	0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms