RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C FUM1P08417 488 aaKnown RBP3.86□□□□□ -1.79
SNF8YPL002C KSS1P14681 368 aa3.86□□□□□ -1.79
SNF8YPL002C AMD1P15274 810 aaKnown RBP3.86□□□□□ -1.79
SNF8YPL002C DPH5P32469 300 aaPredicted RBP3.86□□□□□ -1.79
SNF8YPL002C TIP20P33891 701 aa3.86□□□□□ -1.79
SNF8YPL002C LHS1P36016 881 aa3.86□□□□□ -1.79
SNF8YPL002C YHR127WP38833 243 aaKnown RBP3.86□□□□□ -1.79
SNF8YPL002C RTT107P38850 1070 aa3.86□□□□□ -1.79
SNF8YPL002C CCT4P39078 528 aaKnown RBP3.86□□□□□ -1.79
SNF8YPL002C SAP1P39955 897 aaKnown RBP3.86□□□□□ -1.79
SNF8YPL002C CUP9P41817 306 aa3.86□□□□□ -1.79
SNF8YPL002C AGX1P43567 385 aa3.86□□□□□ -1.79
SNF8YPL002C MDV1P47025 714 aa3.86□□□□□ -1.79
SNF8YPL002C HOC1P47124 396 aa3.86□□□□□ -1.79
SNF8YPL002C JHD2P47156 728 aaPredicted RBP3.86□□□□□ -1.79
SNF8YPL002C BRO1P48582 844 aa3.86□□□□□ -1.79
SNF8YPL002C GIS2P53849 153 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SNF8YPL002C YDR541CQ03049 344 aa3.86□□□□□ -1.79
SNF8YPL002C YRA1Q12159 226 aaKnown RBP3.86□□□□□ -1.79
SNF8YPL002C COX17Q12287 69 aa3.86□□□□□ -1.79
SNF8YPL002C CDC39P25655 2108 aaKnown RBP3.86□□□□□ -1.79
SNF8YPL002C YLR462WO13556 202 aa3.85□□□□□ -1.79
SNF8YPL002C SSA3P09435 649 aaKnown RBP3.85□□□□□ -1.79
SNF8YPL002C RSR1P13856 272 aa3.85□□□□□ -1.79
SNF8YPL002C MET8P15807 274 aa3.85□□□□□ -1.79
SNF8YPL002C FAR1P21268 830 aa3.85□□□□□ -1.79
SNF8YPL002C YCL068CP25593 260 aa3.85□□□□□ -1.79
SNF8YPL002C PMT2P31382 759 aa3.85□□□□□ -1.79
SNF8YPL002C MCM10P32354 571 aa3.85□□□□□ -1.79
SNF8YPL002C RRP1P35178 278 aaPredicted RBP3.85□□□□□ -1.79
SNF8YPL002C SWH1P35845 1188 aa3.85□□□□□ -1.79
SNF8YPL002C TEF4P36008 412 aaKnown RBP3.85□□□□□ -1.79
SNF8YPL002C YHL049CP38722 271 aa3.85□□□□□ -1.79
SNF8YPL002C YLF2P38746 405 aa3.85□□□□□ -1.79
SNF8YPL002C UBA4P38820 440 aa3.85□□□□□ -1.79
SNF8YPL002C YIL152WP40455 235 aa3.85□□□□□ -1.79
SNF8YPL002C DPH1P40487 425 aaKnown RBP3.85□□□□□ -1.79
SNF8YPL002C VMA13P41807 478 aaKnown RBP3.85□□□□□ -1.79
SNF8YPL002C ERR3P42222 437 aa3.85□□□□□ -1.79
SNF8YPL002C YFL064CP43540 174 aa3.85□□□□□ -1.79
SNF8YPL002C PMT4P46971 762 aa3.85□□□□□ -1.79
SNF8YPL002C YJR120WP47157 116 aa3.85□□□□□ -1.79
SNF8YPL002C SHE4P51534 789 aa3.85□□□□□ -1.79
SNF8YPL002C MPS2P53159 387 aa3.85□□□□□ -1.79
SNF8YPL002C VPS75P53853 264 aa3.85□□□□□ -1.79
SNF8YPL002C GIM3P53900 129 aa3.85□□□□□ -1.79
SNF8YPL002C PRP38Q00723 242 aaPredicted RBP3.85□□□□□ -1.79
SNF8YPL002C RRN5Q02983 363 aa3.85□□□□□ -1.79
SNF8YPL002C PLM2Q04383 521 aa3.85□□□□□ -1.79
SNF8YPL002C NNT1Q05874 261 aa3.85□□□□□ -1.79
SNF8YPL002C NDL1Q06568 189 aa3.85□□□□□ -1.79
SNF8YPL002C LYS21Q12122 440 aaKnown RBP3.85□□□□□ -1.79
SNF8YPL002C RMP1Q12530 201 aa3.85□□□□□ -1.79
SNF8YPL002C PHO2P07269 559 aa3.84□□□□□ -1.79
SNF8YPL002C PHO13P19881 312 aa3.84□□□□□ -1.79
SNF8YPL002C YCR099CP25657 155 aa3.84□□□□□ -1.79
SNF8YPL002C CMK1P27466 446 aaKnown RBP3.84□□□□□ -1.79
SNF8YPL002C PTP2P29461 750 aa3.84□□□□□ -1.79
SNF8YPL002C TPS2P31688 896 aaKnown RBP3.84□□□□□ -1.79
SNF8YPL002C SRB4P32569 687 aa3.84□□□□□ -1.79
SNF8YPL002C PTR2P32901 601 aa3.84□□□□□ -1.79
SNF8YPL002C MMS21P38632 267 aa3.84□□□□□ -1.79
SNF8YPL002C INM1P38710 295 aa3.84□□□□□ -1.79
SNF8YPL002C SEO1P39709 593 aa3.84□□□□□ -1.79
SNF8YPL002C LAS21P40367 830 aa3.84□□□□□ -1.79
SNF8YPL002C KAP114P53067 1004 aa3.84□□□□□ -1.79
SNF8YPL002C BSC5P53755 489 aa3.84□□□□□ -1.79
SNF8YPL002C ERV25P54837 211 aaKnown RBP3.84□□□□□ -1.79
SNF8YPL002C YSA1Q01976 231 aa3.84□□□□□ -1.79
SNF8YPL002C HOT1Q03213 719 aa3.84□□□□□ -1.79
SNF8YPL002C ERB1Q04660 807 aaKnown RBP3.84□□□□□ -1.79
SNF8YPL002C SSQ1Q05931 657 aaPredicted RBP3.84□□□□□ -1.79
SNF8YPL002C YOL159CQ08300 171 aa3.84□□□□□ -1.79
SNF8YPL002C APL4Q12028 832 aa3.84□□□□□ -1.79
SNF8YPL002C DAS2Q12084 232 aa3.84□□□□□ -1.79
SNF8YPL002C REX3Q12090 404 aa3.84□□□□□ -1.79
SNF8YPL002C ATG29Q12092 213 aa3.84□□□□□ -1.79
SNF8YPL002C RAD10P06838 210 aa3.83□□□□□ -1.8
SNF8YPL002C PET494P07390 489 aaPredicted RBP3.83□□□□□ -1.8
SNF8YPL002C YAR066WP0CX18 203 aa3.83□□□□□ -1.8
SNF8YPL002C YHR214WP0CX19 203 aa3.83□□□□□ -1.8
SNF8YPL002C PRP16P15938 1071 aaPredicted RBP3.83□□□□□ -1.8
SNF8YPL002C SPO16P17122 198 aa3.83□□□□□ -1.8
SNF8YPL002C FAA1P30624 700 aaKnown RBP3.83□□□□□ -1.8
SNF8YPL002C SMI1P32566 505 aa3.83□□□□□ -1.8
SNF8YPL002C NPL6P32832 435 aa3.83□□□□□ -1.8
SNF8YPL002C YBR071WP38243 211 aa3.83□□□□□ -1.8
SNF8YPL002C ARO9P38840 513 aaPredicted RBP3.83□□□□□ -1.8
SNF8YPL002C MET30P39014 640 aa3.83□□□□□ -1.8
SNF8YPL002C MTW1P39731 289 aa3.83□□□□□ -1.8
SNF8YPL002C VPS52P39904 641 aa3.83□□□□□ -1.8
SNF8YPL002C LCP5P40079 357 aaPredicted RBP3.83□□□□□ -1.8
SNF8YPL002C SCC4P40090 624 aa3.83□□□□□ -1.8
SNF8YPL002C INA22P40576 216 aa3.83□□□□□ -1.8
SNF8YPL002C MAD2P40958 196 aa3.83□□□□□ -1.8
SNF8YPL002C YJL055WP47044 245 aa3.83□□□□□ -1.8
SNF8YPL002C PET130P47065 347 aa3.83□□□□□ -1.8
SNF8YPL002C LCL3P53153 274 aa3.83□□□□□ -1.8
SNF8YPL002C YNR071CP53757 342 aa3.83□□□□□ -1.8
SNF8YPL002C YMR034CQ05131 434 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms