RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YMR087WQ04299 284 aa6.62□□□□□ -1.35
HDA1YNL021W NSE1Q07913 336 aa6.62□□□□□ -1.35
HDA1YNL021W RNH203Q12338 110 aa6.62□□□□□ -1.35
HDA1YNL021W ECM4P36156 370 aa6.62□□□□□ -1.35
HDA1YNL021W OLA1P38219 394 aaKnown RBP6.62□□□□□ -1.35
HDA1YNL021W IML3P38265 245 aa6.62□□□□□ -1.35
HDA1YNL021W UBP5P39944 805 aa6.62□□□□□ -1.35
HDA1YNL021W HMF1P40037 129 aaKnown RBP6.62□□□□□ -1.35
HDA1YNL021W TDA10P42938 290 aa6.62□□□□□ -1.35
HDA1YNL021W FMP33P46998 180 aa6.62□□□□□ -1.35
HDA1YNL021W YHC3P47040 408 aa6.62□□□□□ -1.35
HDA1YNL021W PMT5P52867 743 aa6.62□□□□□ -1.35
HDA1YNL021W APC4Q04601 652 aa6.62□□□□□ -1.35
HDA1YNL021W SPO24Q3E752 67 aa6.62□□□□□ -1.35
HDA1YNL021W PPR1P07272 904 aaPredicted RBP6.61□□□□□ -1.35
HDA1YNL021W CHS1P08004 1131 aa6.61□□□□□ -1.35
HDA1YNL021W RPS16AP0CX51 143 aaKnown RBP6.61□□□□□ -1.35
HDA1YNL021W RPS16BP0CX52 143 aaKnown RBP6.61□□□□□ -1.35
HDA1YNL021W GID7P25569 745 aa6.61□□□□□ -1.35
HDA1YNL021W ERG1P32476 496 aaKnown RBP6.61□□□□□ -1.35
HDA1YNL021W RGT1P32862 1170 aa6.61□□□□□ -1.35
HDA1YNL021W IMP3P32899 183 aaPredicted RBP6.61□□□□□ -1.35
HDA1YNL021W YHR045WP38775 560 aa6.61□□□□□ -1.35
HDA1YNL021W SHR3Q02774 210 aa6.61□□□□□ -1.35
HDA1YNL021W SML1Q04964 104 aa6.61□□□□□ -1.35
HDA1YNL021W RDR1Q08904 546 aa6.61□□□□□ -1.35
HDA1YNL021W RPS13P05756 151 aaKnown RBP6.61□□□□□ -1.35
HDA1YNL021W MSF1P08425 469 aa6.61□□□□□ -1.35
HDA1YNL021W RAP1P11938 827 aa6.61□□□□□ -1.35
HDA1YNL021W ADY2P25613 283 aa6.61□□□□□ -1.35
HDA1YNL021W SUA5P32579 426 aa6.61□□□□□ -1.35
HDA1YNL021W SLX1P38324 304 aa6.61□□□□□ -1.35
HDA1YNL021W UBA4P38820 440 aa6.61□□□□□ -1.35
HDA1YNL021W YER085CP40058 173 aa6.61□□□□□ -1.35
HDA1YNL021W BUD32P53323 261 aa6.61□□□□□ -1.35
HDA1YNL021W PET117Q02771 107 aa6.61□□□□□ -1.35
HDA1YNL021W TMA10Q06177 86 aa6.61□□□□□ -1.35
HDA1YNL021W YPR022CQ12139 1133 aa6.61□□□□□ -1.35
HDA1YNL021W YDR262WQ12331 272 aa6.61□□□□□ -1.35
HDA1YNL021W ERP3Q12403 225 aa6.61□□□□□ -1.35
HDA1YNL021W YMR085WP0CF18 432 aa6.6□□□□□ -1.35
HDA1YNL021W MAS1P10507 462 aa6.6□□□□□ -1.35
HDA1YNL021W STE11P23561 717 aa6.6□□□□□ -1.35
HDA1YNL021W MIA40P36046 403 aa6.6□□□□□ -1.35
HDA1YNL021W RCY1P39531 840 aa6.6□□□□□ -1.35
HDA1YNL021W SNG1P46950 547 aa6.6□□□□□ -1.35
HDA1YNL021W YJR011CP47086 261 aaPredicted RBP6.6□□□□□ -1.35
HDA1YNL021W YGL117WP53133 265 aa6.6□□□□□ -1.35
HDA1YNL021W YGL039WP53183 348 aaKnown RBP6.6□□□□□ -1.35
HDA1YNL021W ARK1P53974 638 aa6.6□□□□□ -1.35
HDA1YNL021W ATG26Q06321 1198 aa6.6□□□□□ -1.35
HDA1YNL021W AHA1Q12449 350 aaKnown RBP6.6□□□□□ -1.35
HDA1YNL021W DAL2P25335 343 aa6.59□□□□□ -1.35
HDA1YNL021W SRB4P32569 687 aa6.59□□□□□ -1.35
HDA1YNL021W SPR1P32603 445 aa6.59□□□□□ -1.35
HDA1YNL021W CBF5P33322 483 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35 RIP-Chip
HDA1YNL021W ERV46P39727 415 aa6.59□□□□□ -1.35
HDA1YNL021W NDC80P40460 691 aa6.59□□□□□ -1.35
HDA1YNL021W KTR6P54070 446 aa6.59□□□□□ -1.35
HDA1YNL021W ARR2Q06597 130 aa6.59□□□□□ -1.35
HDA1YNL021W TSR1Q07381 788 aaKnown RBP6.59□□□□□ -1.35
HDA1YNL021W KSS1P14681 368 aa6.59□□□□□ -1.35
HDA1YNL021W POL30P15873 258 aaKnown RBP6.59□□□□□ -1.35
HDA1YNL021W NUP1P20676 1076 aa6.59□□□□□ -1.35
HDA1YNL021W ERG4P25340 473 aa6.59□□□□□ -1.35
HDA1YNL021W SAC1P32368 623 aaKnown RBP6.59□□□□□ -1.35
HDA1YNL021W TSA1P34760 196 aaKnown RBP6.59□□□□□ -1.35
HDA1YNL021W TVP38P36164 337 aa6.59□□□□□ -1.35
HDA1YNL021W BNA4P38169 460 aa6.59□□□□□ -1.35
HDA1YNL021W KAP104P38217 918 aaKnown RBP6.59□□□□□ -1.35
HDA1YNL021W TCD1P38756 429 aa6.59□□□□□ -1.35
HDA1YNL021W PAC11P40960 533 aa6.59□□□□□ -1.35
HDA1YNL021W UBP8P50102 471 aa6.59□□□□□ -1.35
HDA1YNL021W MRPS17Q03246 237 aaPredicted RBP6.59□□□□□ -1.35
HDA1YNL021W PFA5Q03289 374 aa6.59□□□□□ -1.35
HDA1YNL021W SLD5Q03406 294 aa6.59□□□□□ -1.35
HDA1YNL021W PEP5P12868 1029 aa6.58□□□□□ -1.36
HDA1YNL021W RAD57P25301 460 aa6.58□□□□□ -1.36
HDA1YNL021W PAD1P33751 242 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
HDA1YNL021W YKR015CP36111 568 aa6.58□□□□□ -1.36
HDA1YNL021W INM1P38710 295 aa6.58□□□□□ -1.36
HDA1YNL021W PRP39P39682 629 aaKnown RBP6.58□□□□□ -1.36
HDA1YNL021W MAL13P53338 473 aa6.58□□□□□ -1.36
HDA1YNL021W SMC5Q08204 1093 aa6.58□□□□□ -1.36
HDA1YNL021W BRR1Q99177 341 aaPredicted RBP6.58□□□□□ -1.36
HDA1YNL021W SUC2P00724 532 aa6.58□□□□□ -1.36
HDA1YNL021W CDC36P06100 191 aaPredicted RBP6.58□□□□□ -1.36
HDA1YNL021W ITR1P30605 584 aa6.58□□□□□ -1.36
HDA1YNL021W MRPL9P31334 269 aa6.58□□□□□ -1.36
HDA1YNL021W YMC2P38087 329 aa6.58□□□□□ -1.36
HDA1YNL021W YDL186WP48568 277 aa6.58□□□□□ -1.36
HDA1YNL021W ASI1P54074 624 aa6.58□□□□□ -1.36
HDA1YNL021W SMX3P54999 86 aaPredicted RBP6.58□□□□□ -1.36
HDA1YNL021W SNU56Q03782 492 aaKnown RBP6.58□□□□□ -1.36
HDA1YNL021W YMR310CQ04867 317 aaPredicted RBP6.58□□□□□ -1.36
HDA1YNL021W PEX27Q08580 376 aa6.58□□□□□ -1.36
HDA1YNL021W DAS2Q12084 232 aa6.58□□□□□ -1.36
HDA1YNL021W CKI1P20485 582 aa6.57□□□□□ -1.36
HDA1YNL021W DAL81P21657 970 aa6.57□□□□□ -1.36
HDA1YNL021W MAK32P23060 363 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms