RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YIL054WP40524 105 aa3.41□□□□□ -1.86
LCB5YLR260W YRB1P41920 201 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W RRT5P43607 289 aa3.41□□□□□ -1.86
LCB5YLR260W RTT101P47050 842 aa3.41□□□□□ -1.86
LCB5YLR260W AIM22P47051 409 aa3.41□□□□□ -1.86
LCB5YLR260W PRP24P49960 444 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W DIA3P52290 468 aa3.41□□□□□ -1.86
LCB5YLR260W FLC3P53121 802 aa3.41□□□□□ -1.86
LCB5YLR260W SAM50P53969 484 aa3.41□□□□□ -1.86
LCB5YLR260W ORC3P54790 616 aa3.41□□□□□ -1.86
LCB5YLR260W ARG5,6Q01217 863 aa3.41□□□□□ -1.86
LCB5YLR260W STD1Q02794 444 aa3.41□□□□□ -1.86
LCB5YLR260W DIG1Q03063 452 aaKnown RBP3.41□□□□□ -1.86
LCB5YLR260W PIR1Q03178 341 aa3.41□□□□□ -1.86
LCB5YLR260W VPS60Q03390 229 aa3.41□□□□□ -1.86
LCB5YLR260W EKI1Q03764 534 aa3.41□□□□□ -1.86
LCB5YLR260W FIN1Q03898 291 aa3.41□□□□□ -1.86
LCB5YLR260W RSM24Q03976 319 aa3.41□□□□□ -1.86
LCB5YLR260W BNA7Q04066 261 aa3.41□□□□□ -1.86
LCB5YLR260W APC4Q04601 652 aa3.41□□□□□ -1.86
LCB5YLR260W ARG7Q04728 441 aa3.41□□□□□ -1.86
LCB5YLR260W IVY1Q04934 453 aa3.41□□□□□ -1.86
LCB5YLR260W PUS9Q12069 462 aa3.41□□□□□ -1.86
LCB5YLR260W ATG9Q12142 997 aa3.41□□□□□ -1.86
LCB5YLR260W ATG31Q12421 196 aa3.41□□□□□ -1.86
LCB5YLR260W DCP1Q12517 231 aaPredicted RBP3.41□□□□□ -1.86
LCB5YLR260W SEN1Q00416 2231 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W RPL24AP04449 155 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W YML003WP0CF16 290 aa3.4□□□□□ -1.86
LCB5YLR260W ERG11P10614 530 aa3.4□□□□□ -1.86
LCB5YLR260W MRP13P12686 339 aa3.4□□□□□ -1.86
LCB5YLR260W PEP5P12868 1029 aa3.4□□□□□ -1.86
LCB5YLR260W KGD1P20967 1014 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W YCP4P25349 247 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W YCR015CP25616 317 aa3.4□□□□□ -1.86
LCB5YLR260W RAD14P28519 371 aa3.4□□□□□ -1.86
LCB5YLR260W RAD23P32628 398 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W UGP1P32861 499 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W APT2P36973 181 aa3.4□□□□□ -1.86
LCB5YLR260W ASC1P38011 319 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W KAP104P38217 918 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W EXO1P39875 702 aa3.4□□□□□ -1.86
LCB5YLR260W SER33P40510 469 aa3.4□□□□□ -1.86
LCB5YLR260W YJR079WP47126 109 aa3.4□□□□□ -1.86
LCB5YLR260W SNA4Q07549 140 aa3.4□□□□□ -1.86
LCB5YLR260W CMS1Q07897 291 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W GEP3Q08622 556 aa3.4□□□□□ -1.86
LCB5YLR260W AIM41Q12032 185 aa3.4□□□□□ -1.86
LCB5YLR260W BTS1Q12051 335 aa3.4□□□□□ -1.86
LCB5YLR260W YLR046CQ12253 270 aa3.4□□□□□ -1.86
LCB5YLR260W PRS5Q12265 496 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W GLT1Q12680 2145 aaKnown RBP3.4□□□□□ -1.86
LCB5YLR260W CAR1P00812 333 aaKnown RBP3.4□□□□□ -1.87
LCB5YLR260W RAD10P06838 210 aa3.4□□□□□ -1.87
LCB5YLR260W MET3P08536 511 aa3.4□□□□□ -1.87
LCB5YLR260W POL30P15873 258 aaKnown RBP3.4□□□□□ -1.87
LCB5YLR260W VMA16P23968 213 aa3.4□□□□□ -1.87
LCB5YLR260W CWP1P28319 239 aa3.4□□□□□ -1.87
LCB5YLR260W PUB1P32588 453 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87 RIP-Chip
LCB5YLR260W PFA3P42836 336 aa3.4□□□□□ -1.87
LCB5YLR260W LOH1P47055 219 aa3.4□□□□□ -1.87
LCB5YLR260W PYK2P52489 506 aaKnown RBP3.4□□□□□ -1.87
LCB5YLR260W EMC4P53073 190 aa3.4□□□□□ -1.87
LCB5YLR260W COX18P53239 316 aa3.4□□□□□ -1.87
LCB5YLR260W PXR1P53335 271 aaPredicted RBP3.4□□□□□ -1.87
LCB5YLR260W REC102Q02721 264 aa3.4□□□□□ -1.87
LCB5YLR260W HMO1Q03973 246 aaKnown RBP3.4□□□□□ -1.87
LCB5YLR260W GMC2Q06201 188 aa3.4□□□□□ -1.87
LCB5YLR260W GRS2Q06817 618 aa3.4□□□□□ -1.87
LCB5YLR260W MED2Q12124 431 aa3.4□□□□□ -1.87
LCB5YLR260W RRP12Q12754 1228 aaKnown RBP3.4□□□□□ -1.87
LCB5YLR260W YDL007C-AQ2V2Q0 85 aa3.4□□□□□ -1.87
LCB5YLR260W MTR10Q99189 972 aa3.4□□□□□ -1.87
LCB5YLR260W MF(ALPHA)1P01149 165 aa3.39□□□□□ -1.87
LCB5YLR260W CDC21P06785 304 aa3.39□□□□□ -1.87
LCB5YLR260W RAD3P06839 778 aa3.39□□□□□ -1.87
LCB5YLR260W YAK1P14680 807 aa3.39□□□□□ -1.87
LCB5YLR260W SAR1P20606 190 aaKnown RBP3.39□□□□□ -1.87
LCB5YLR260W EMP70P32802 667 aa3.39□□□□□ -1.87
LCB5YLR260W YKL071WP36086 256 aa3.39□□□□□ -1.87
LCB5YLR260W IML3P38265 245 aa3.39□□□□□ -1.87
LCB5YLR260W YHR078WP38799 552 aa3.39□□□□□ -1.87
LCB5YLR260W BAT1P38891 393 aaKnown RBP3.39□□□□□ -1.87
LCB5YLR260W PCL6P40038 420 aa3.39□□□□□ -1.87
LCB5YLR260W ATM1P40416 690 aa3.39□□□□□ -1.87
LCB5YLR260W IDS2P46958 469 aa3.39□□□□□ -1.87
LCB5YLR260W YJL118WP47022 219 aa3.39□□□□□ -1.87
LCB5YLR260W ASN2P49090 572 aaKnown RBP3.39□□□□□ -1.87
LCB5YLR260W PEX31P53203 462 aa3.39□□□□□ -1.87
LCB5YLR260W NRD1P53617 575 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
LCB5YLR260W OCA2P53949 197 aa3.39□□□□□ -1.87
LCB5YLR260W ERG5P54781 538 aa3.39□□□□□ -1.87
LCB5YLR260W SIZ1Q04195 904 aa3.39□□□□□ -1.87
LCB5YLR260W HOF1Q05080 669 aa3.39□□□□□ -1.87
LCB5YLR260W DCS1Q06151 350 aa3.39□□□□□ -1.87
LCB5YLR260W RXT3Q07458 294 aa3.39□□□□□ -1.87
LCB5YLR260W YLR012CQ07927 99 aa3.39□□□□□ -1.87
LCB5YLR260W OCA6Q12454 224 aa3.39□□□□□ -1.87
LCB5YLR260W IRA2P19158 3079 aa3.39□□□□□ -1.87
LCB5YLR260W TDH2P00358 332 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms