RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C NUF2P33895 451 aa9.7□□□□□ -0.86
SHM2YLR058C LEU5P38702 357 aa9.7□□□□□ -0.86
SHM2YLR058C FAR7P43592 221 aa9.7□□□□□ -0.86
SHM2YLR058C ASK10P48361 1146 aa9.7□□□□□ -0.86
SHM2YLR058C YOR365CQ08844 703 aa9.7□□□□□ -0.86
SHM2YLR058C STE4P18851 423 aa9.69□□□□□ -0.86
SHM2YLR058C IDH1P28834 360 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
SHM2YLR058C PTP2P29461 750 aa9.69□□□□□ -0.86
SHM2YLR058C MRPL6P32904 214 aa9.69□□□□□ -0.86
SHM2YLR058C SPC42P36094 363 aa9.69□□□□□ -0.86
SHM2YLR058C VPS51P36116 164 aa9.69□□□□□ -0.86
SHM2YLR058C PZF1P39933 429 aa9.69□□□□□ -0.86
SHM2YLR058C YRB2P40517 327 aa9.69□□□□□ -0.86
SHM2YLR058C MET28P40573 187 aa9.69□□□□□ -0.86
SHM2YLR058C SNM1P40993 198 aa9.69□□□□□ -0.86
SHM2YLR058C ALB1P47019 175 aaPredicted RBP9.69□□□□□ -0.86
SHM2YLR058C RNH70P53331 553 aa9.69□□□□□ -0.86
SHM2YLR058C DCP2P53550 970 aaKnown RBP9.69□□□□□ -0.86
SHM2YLR058C YPL107WQ02873 248 aa9.69□□□□□ -0.86
SHM2YLR058C TRS23Q03784 219 aa9.69□□□□□ -0.86
SHM2YLR058C NBA1Q08229 501 aaKnown RBP9.69□□□□□ -0.86
SHM2YLR058C GLE1Q12315 538 aa9.69□□□□□ -0.86
SHM2YLR058C RPS21BQ3E754 87 aaKnown RBP9.69□□□□□ -0.86
SHM2YLR058C STP22P25604 385 aa9.68□□□□□ -0.86
SHM2YLR058C DCG1P32460 244 aa9.68□□□□□ -0.86
SHM2YLR058C MKK2P32491 506 aa9.68□□□□□ -0.86
SHM2YLR058C YAR028WP39548 234 aa9.68□□□□□ -0.86
SHM2YLR058C VPS52P39904 641 aa9.68□□□□□ -0.86
SHM2YLR058C GVP36P40531 326 aaKnown RBP9.68□□□□□ -0.86
SHM2YLR058C TPS1Q00764 495 aaKnown RBP9.68□□□□□ -0.86
SHM2YLR058C CTL1Q03220 320 aaKnown RBP9.68□□□□□ -0.86
SHM2YLR058C PET9P18239 318 aaKnown RBP9.67□□□□□ -0.86
SHM2YLR058C YCK1P23291 538 aa9.67□□□□□ -0.86
SHM2YLR058C SAC1P32368 623 aaKnown RBP9.67□□□□□ -0.86
SHM2YLR058C CYS4P32582 507 aaKnown RBP9.67□□□□□ -0.86
SHM2YLR058C YOR062CP36025 268 aa9.67□□□□□ -0.86
SHM2YLR058C RCY1P39531 840 aa9.67□□□□□ -0.86
SHM2YLR058C ARI1P53111 347 aaKnown RBP9.67□□□□□ -0.86
SHM2YLR058C PRM8P53174 237 aa9.67□□□□□ -0.86
SHM2YLR058C SYF2P53277 215 aaPredicted RBP9.67□□□□□ -0.86
SHM2YLR058C RNH202Q05635 350 aa9.67□□□□□ -0.86
SHM2YLR058C YLR126CQ12288 251 aa9.67□□□□□ -0.86
SHM2YLR058C MOD5P07884 428 aa9.66□□□□□ -0.86
SHM2YLR058C HOM3P10869 527 aa9.66□□□□□ -0.86
SHM2YLR058C GPI12P23797 304 aa9.66□□□□□ -0.86
SHM2YLR058C UBS1P38290 277 aa9.66□□□□□ -0.86
SHM2YLR058C PDS1P40316 373 aaPredicted RBP9.66□□□□□ -0.86
SHM2YLR058C SPT20P50875 604 aa9.66□□□□□ -0.86
SHM2YLR058C MAL11P53048 616 aa9.66□□□□□ -0.86
SHM2YLR058C DAM1P53267 343 aa9.66□□□□□ -0.86
SHM2YLR058C YMR099CQ03161 297 aaKnown RBP9.66□□□□□ -0.86
SHM2YLR058C YPL066WQ12194 479 aa9.66□□□□□ -0.86
SHM2YLR058C RIB3Q99258 208 aa9.66□□□□□ -0.86
SHM2YLR058C RPL17AP05740 184 aaKnown RBP9.65□□□□□ -0.86
SHM2YLR058C RHB1P25378 209 aa9.65□□□□□ -0.86
SHM2YLR058C RIM101P33400 625 aa9.65□□□□□ -0.86
SHM2YLR058C TOD6P34219 525 aa9.65□□□□□ -0.86
SHM2YLR058C ANS1P38832 159 aa9.65□□□□□ -0.86
SHM2YLR058C MBP1P39678 833 aa9.65□□□□□ -0.86
SHM2YLR058C SPO73P40031 143 aa9.65□□□□□ -0.86
SHM2YLR058C COG3P40094 801 aa9.65□□□□□ -0.86
SHM2YLR058C GID8P40208 455 aa9.65□□□□□ -0.86
SHM2YLR058C RPL17BP46990 184 aaKnown RBP9.65□□□□□ -0.86
SHM2YLR058C APS3P47064 194 aa9.65□□□□□ -0.86
SHM2YLR058C YMR210WQ03649 449 aa9.65□□□□□ -0.86
SHM2YLR058C VPS36Q06696 566 aa9.65□□□□□ -0.86
SHM2YLR058C SIR3P06701 978 aa9.65□□□□□ -0.87
SHM2YLR058C RIP1P08067 215 aa9.65□□□□□ -0.87
SHM2YLR058C RPL20AP0CX23 172 aaKnown RBP9.65□□□□□ -0.87
SHM2YLR058C RPL20BP0CX24 172 aaPredicted RBP9.65□□□□□ -0.87
SHM2YLR058C CDC26P14724 124 aa9.65□□□□□ -0.87
SHM2YLR058C GLK1P17709 500 aaKnown RBP9.65□□□□□ -0.87
SHM2YLR058C FAR1P21268 830 aa9.65□□□□□ -0.87
SHM2YLR058C PMT2P31382 759 aa9.65□□□□□ -0.87
SHM2YLR058C ECM8P38246 354 aa9.65□□□□□ -0.87
SHM2YLR058C IFA38P38286 347 aa9.65□□□□□ -0.87
SHM2YLR058C YBR285WP38354 144 aa9.65□□□□□ -0.87
SHM2YLR058C ECM34P38728 170 aa9.65□□□□□ -0.87
SHM2YLR058C TAT2P38967 592 aa9.65□□□□□ -0.87
SHM2YLR058C BIT61P47041 543 aa9.65□□□□□ -0.87
SHM2YLR058C PMT3P47190 753 aa9.65□□□□□ -0.87
SHM2YLR058C NUP57P48837 541 aa9.65□□□□□ -0.87
SHM2YLR058C TOS2P50078 622 aa9.65□□□□□ -0.87
SHM2YLR058C LCL3P53153 274 aa9.65□□□□□ -0.87
SHM2YLR058C YGR067CP53243 804 aa9.65□□□□□ -0.87
SHM2YLR058C YDR541CQ03049 344 aa9.65□□□□□ -0.87
SHM2YLR058C INP1Q03694 420 aa9.65□□□□□ -0.87
SHM2YLR058C BDS1Q08347 646 aa9.65□□□□□ -0.87
SHM2YLR058C NFI1Q12216 726 aa9.65□□□□□ -0.87
SHM2YLR058C COX1P00401 534 aa9.64□□□□□ -0.87
SHM2YLR058C YSF3P0C074 85 aaPredicted RBP9.64□□□□□ -0.87
SHM2YLR058C BAR1P12630 587 aa9.64□□□□□ -0.87
SHM2YLR058C KSS1P14681 368 aa9.64□□□□□ -0.87
SHM2YLR058C SAC7P17121 654 aa9.64□□□□□ -0.87
SHM2YLR058C BCK2P33306 851 aa9.64□□□□□ -0.87
SHM2YLR058C AHP1P38013 176 aaKnown RBP9.64□□□□□ -0.87
SHM2YLR058C SEA4P38164 1038 aa9.64□□□□□ -0.87
SHM2YLR058C PRE6P40303 254 aaKnown RBP9.64□□□□□ -0.87
SHM2YLR058C YJR141WP47172 347 aaPredicted RBP9.64□□□□□ -0.87
SHM2YLR058C IMD4P50094 524 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms