RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeastyeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS22YKL193C RNH203Q12338 110 aa2.6□□□□□ -1.99
SDS22YKL193C NAG1Q8TGN9 163 aa2.6□□□□□ -1.99
SDS22YKL193C PAB1P04147 577 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
SDS22YKL193C COX13P32799 129 aa2.59□□□□□ -1.99
SDS22YKL193C PGU1P47180 361 aa2.59□□□□□ -1.99
SDS22YKL193C CLD1P53264 445 aa2.59□□□□□ -1.99
SDS22YKL193C ALF1P53904 254 aa2.59□□□□□ -1.99
SDS22YKL193C SPR6Q01684 191 aa2.59□□□□□ -1.99
SDS22YKL193C MRPS16Q02608 121 aa2.59□□□□□ -1.99
SDS22YKL193C PSK1P31374 1356 aa2.59□□□□□ -2
SDS22YKL193C OPI3P05375 206 aa2.58□□□□□ -2
SDS22YKL193C LTV1P34078 463 aa2.58□□□□□ -2
SDS22YKL193C SKT5P34226 696 aa2.58□□□□□ -2
SDS22YKL193C SEO1P39709 593 aa2.58□□□□□ -2
SDS22YKL193C ALD5P40047 520 aaKnown RBP2.58□□□□□ -2
SDS22YKL193C STE24P47154 453 aa2.58□□□□□ -2
SDS22YKL193C PMT5P52867 743 aa2.58□□□□□ -2
SDS22YKL193C ROG1P53118 685 aa2.58□□□□□ -2
SDS22YKL193C SKI8Q02793 397 aaPredicted RBP2.58□□□□□ -2
SDS22YKL193C YPR091CQ06833 770 aa2.58□□□□□ -2
SDS22YKL193C GPM3Q12326 303 aa2.58□□□□□ -2
SDS22YKL193C PHO91P27514 894 aa2.57□□□□□ -2
SDS22YKL193C NRP1P32770 719 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SDS22YKL193C GPX2P38143 162 aa2.57□□□□□ -2
SDS22YKL193C QDR3P38227 689 aa2.57□□□□□ -2
SDS22YKL193C YNL208WP40159 199 aaKnown RBP2.57□□□□□ -2
SDS22YKL193C NSE1Q07913 336 aa2.57□□□□□ -2
SDS22YKL193C DCI1Q08558 271 aa2.57□□□□□ -2
SDS22YKL193C YBL111CQ3E7Y5 667 aa2.57□□□□□ -2
SDS22YKL193C PRB1P09232 635 aa2.56□□□□□ -2
SDS22YKL193C RPL12AP0CX53 165 aaKnown RBP2.56□□□□□ -2
SDS22YKL193C RPL12BP0CX54 165 aa2.56□□□□□ -2
SDS22YKL193C SLM5P25345 492 aaKnown RBP2.56□□□□□ -2
SDS22YKL193C FUN26P31381 517 aa2.56□□□□□ -2
SDS22YKL193C YSC83P32792 385 aa2.56□□□□□ -2
SDS22YKL193C MPE1P35728 441 aaKnown RBP2.56□□□□□ -2
SDS22YKL193C MCR1P36060 302 aaKnown RBP2.56□□□□□ -2
SDS22YKL193C TIM17P39515 158 aa2.56□□□□□ -2
SDS22YKL193C RRN9P53437 365 aa2.56□□□□□ -2
SDS22YKL193C PRP3Q03338 469 aaPredicted RBP2.56□□□□□ -2
SDS22YKL193C VHS1Q03785 461 aa2.56□□□□□ -2
SDS22YKL193C ECM7Q06200 448 aa2.56□□□□□ -2
SDS22YKL193C YDL114WQ07530 308 aa2.56□□□□□ -2
SDS22YKL193C FCY22Q12119 530 aa2.56□□□□□ -2
SDS22YKL193C TPK3P05986 398 aa2.55□□□□□ -2
SDS22YKL193C RAD5P32849 1169 aaPredicted RBP2.55□□□□□ -2
SDS22YKL193C SRP72P38688 640 aaKnown RBP2.55□□□□□ -2
SDS22YKL193C ATM1P40416 690 aa2.55□□□□□ -2
SDS22YKL193C YPS5P53057 165 aa2.55□□□□□ -2
SDS22YKL193C YGR018CP53211 109 aa2.55□□□□□ -2
SDS22YKL193C RNY1Q02933 434 aaKnown RBP2.55□□□□□ -2
SDS22YKL193C URC2Q04411 772 aa2.55□□□□□ -2
SDS22YKL193C ASA1Q06822 443 aa2.55□□□□□ -2
SDS22YKL193C YOP1Q12402 180 aa2.55□□□□□ -2
SDS22YKL193C HTZ1Q12692 134 aaKnown RBP2.55□□□□□ -2
SDS22YKL193C SMC6Q12749 1114 aa2.55□□□□□ -2
SDS22YKL193C ADH1P00330 348 aaKnown RBP2.54□□□□□ -2
SDS22YKL193C PDE2P06776 526 aa2.54□□□□□ -2
SDS22YKL193C ZRC1P20107 442 aa2.54□□□□□ -2
SDS22YKL193C MRPS9P38120 278 aa2.54□□□□□ -2
SDS22YKL193C PFS1P38872 237 aa2.54□□□□□ -2
SDS22YKL193C ABM1P47146 123 aa2.54□□□□□ -2
SDS22YKL193C MKC7P53379 596 aa2.54□□□□□ -2
SDS22YKL193C TRM112P53738 135 aaPredicted RBP2.54□□□□□ -2
SDS22YKL193C YPQ1Q12010 308 aa2.54□□□□□ -2
SDS22YKL193C YDL199CQ12407 687 aa2.54□□□□□ -2
SDS22YKL193C CBP6P07253 162 aaPredicted RBP2.53□□□□□ -2
SDS22YKL193C ARF1P11076 181 aaKnown RBP2.53□□□□□ -2
SDS22YKL193C VMA8P32610 256 aaKnown RBP2.53□□□□□ -2
SDS22YKL193C TOA2P32774 122 aa2.53□□□□□ -2
SDS22YKL193C SPO23P33757 523 aa2.53□□□□□ -2
SDS22YKL193C GPI18P38211 433 aa2.53□□□□□ -2
SDS22YKL193C ECM8P38246 354 aa2.53□□□□□ -2
SDS22YKL193C PAC11P40960 533 aa2.53□□□□□ -2
SDS22YKL193C BUD27P43573 796 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SDS22YKL193C IGD1P43598 195 aa2.53□□□□□ -2
SDS22YKL193C YGL262WP53054 175 aa2.53□□□□□ -2
SDS22YKL193C CIK1Q01649 594 aa2.53□□□□□ -2
SDS22YKL193C MEH1Q02205 184 aa2.53□□□□□ -2
SDS22YKL193C GYL1Q04322 720 aa2.53□□□□□ -2
SDS22YKL193C YHC1Q05900 231 aaKnown RBP2.53□□□□□ -2
SDS22YKL193C NDL1Q06568 189 aa2.53□□□□□ -2
SDS22YKL193C SPE3Q12074 293 aaKnown RBP2.53□□□□□ -2
SDS22YKL193C PCL9Q12477 304 aa2.53□□□□□ -2
SDS22YKL193C TIR2P33890 251 aa2.52□□□□□ -2.01
SDS22YKL193C DOA1P36037 715 aa2.52□□□□□ -2.01
SDS22YKL193C MRPL27P36526 146 aaPredicted RBP2.52□□□□□ -2.01
SDS22YKL193C GEP4P38812 185 aa2.52□□□□□ -2.01
SDS22YKL193C YDR541CQ03049 344 aa2.52□□□□□ -2.01
SDS22YKL193C ECM11Q04110 302 aa2.52□□□□□ -2.01
SDS22YKL193C NOP6Q07623 225 aaKnown RBP2.52□□□□□ -2.01
SDS22YKL193C DEP1P31385 405 aa2.51□□□□□ -2.01
SDS22YKL193C YML6P51998 286 aa2.51□□□□□ -2.01
SDS22YKL193C TPS1Q00764 495 aaKnown RBP2.51□□□□□ -2.01
SDS22YKL193C RPN5Q12250 445 aaKnown RBP2.51□□□□□ -2.01
SDS22YKL193C MCT1Q12283 360 aa2.51□□□□□ -2.01
SDS22YKL193C FOL3Q12676 427 aaPredicted RBP2.51□□□□□ -2.01
SDS22YKL193C RNA1P11745 407 aaKnown RBP2.5□□□□□ -2.01
SDS22YKL193C CMK2P22517 447 aa2.5□□□□□ -2.01
SDS22YKL193C CHA1P25379 360 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 73.9 ms