RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W COX4P04037 155 aa2.71□□□□□ -1.98
CAP1YKL007W PAB1P04147 577 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98 RIP-Chip
CAP1YKL007W MDH1P17505 334 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
CAP1YKL007W ANR2P36090 516 aaPredicted RBP2.71□□□□□ -1.98
CAP1YKL007W HEL1P36113 551 aa2.71□□□□□ -1.98
CAP1YKL007W BAT1P38891 393 aaKnown RBP2.71□□□□□ -1.98
CAP1YKL007W SER3P40054 469 aa2.71□□□□□ -1.98
CAP1YKL007W TCB2P48231 1178 aa2.71□□□□□ -1.98
CAP1YKL007W YGR111WP53265 400 aa2.71□□□□□ -1.98
CAP1YKL007W AIM32Q04689 311 aa2.71□□□□□ -1.98
CAP1YKL007W YDL114WQ07530 308 aa2.71□□□□□ -1.98
CAP1YKL007W ALG1P16661 449 aa2.7□□□□□ -1.98
CAP1YKL007W DEP1P31385 405 aa2.7□□□□□ -1.98
CAP1YKL007W SEO1P39709 593 aa2.7□□□□□ -1.98
CAP1YKL007W PTI1P39927 425 aaPredicted RBP2.7□□□□□ -1.98
CAP1YKL007W YER186CP40101 306 aa2.7□□□□□ -1.98
CAP1YKL007W KTR6P54070 446 aa2.7□□□□□ -1.98
CAP1YKL007W MRPS16Q02608 121 aa2.7□□□□□ -1.98
CAP1YKL007W RNY1Q02933 434 aaKnown RBP2.7□□□□□ -1.98
CAP1YKL007W PRP3Q03338 469 aaPredicted RBP2.7□□□□□ -1.98
CAP1YKL007W YPR091CQ06833 770 aa2.7□□□□□ -1.98
CAP1YKL007W DNL4Q08387 944 aaPredicted RBP2.7□□□□□ -1.98
CAP1YKL007W CBP6P07253 162 aaPredicted RBP2.69□□□□□ -1.98
CAP1YKL007W ZRC1P20107 442 aa2.69□□□□□ -1.98
CAP1YKL007W LTV1P34078 463 aa2.69□□□□□ -1.98
CAP1YKL007W TRM112P53738 135 aaPredicted RBP2.69□□□□□ -1.98
CAP1YKL007W SKI8Q02793 397 aaPredicted RBP2.69□□□□□ -1.98
CAP1YKL007W YLR456WQ06199 204 aa2.69□□□□□ -1.98
CAP1YKL007W DCI1Q08558 271 aa2.69□□□□□ -1.98
CAP1YKL007W FOL3Q12676 427 aaPredicted RBP2.69□□□□□ -1.98
CAP1YKL007W YCR024C-BQ3E7Z8 88 aa2.69□□□□□ -1.98
CAP1YKL007W PDE2P06776 526 aa2.68□□□□□ -1.98
CAP1YKL007W STE7P06784 515 aa2.68□□□□□ -1.98
CAP1YKL007W DOA1P36037 715 aa2.68□□□□□ -1.98
CAP1YKL007W MCR1P36060 302 aaKnown RBP2.68□□□□□ -1.98
CAP1YKL007W ATM1P40416 690 aa2.68□□□□□ -1.98
CAP1YKL007W CHS6P40955 746 aa2.68□□□□□ -1.98
CAP1YKL007W BUD27P43573 796 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
CAP1YKL007W STE24P47154 453 aa2.68□□□□□ -1.98
CAP1YKL007W YPS5P53057 165 aa2.68□□□□□ -1.98
CAP1YKL007W COS1P53822 381 aa2.68□□□□□ -1.98
CAP1YKL007W APJ1P53940 528 aa2.68□□□□□ -1.98
CAP1YKL007W TPS1Q00764 495 aaKnown RBP2.68□□□□□ -1.98
CAP1YKL007W UAF30Q08747 228 aa2.68□□□□□ -1.98
CAP1YKL007W FCY22Q12119 530 aa2.68□□□□□ -1.98
CAP1YKL007W YOP1Q12402 180 aa2.68□□□□□ -1.98
CAP1YKL007W PRB1P09232 635 aa2.67□□□□□ -1.98
CAP1YKL007W SSC1P0CS90 654 aaKnown RBP2.67□□□□□ -1.98
CAP1YKL007W ARF1P11076 181 aaKnown RBP2.67□□□□□ -1.98
CAP1YKL007W SLM5P25345 492 aaKnown RBP2.67□□□□□ -1.98
CAP1YKL007W TIM17P39515 158 aa2.67□□□□□ -1.98
CAP1YKL007W YLR345WQ06137 509 aa2.67□□□□□ -1.98
CAP1YKL007W MCH1Q07376 486 aa2.67□□□□□ -1.98
CAP1YKL007W MFG1Q07684 458 aa2.67□□□□□ -1.98
CAP1YKL007W MEX67Q99257 599 aaKnown RBP2.67□□□□□ -1.98
CAP1YKL007W XRN1P22147 1528 aaKnown RBP2.67□□□□□ -1.98
CAP1YKL007W TPK3P05986 398 aa2.66□□□□□ -1.98
CAP1YKL007W FUN26P31381 517 aa2.66□□□□□ -1.98
CAP1YKL007W YKL097CP34245 136 aa2.66□□□□□ -1.98
CAP1YKL007W ECM8P38246 354 aa2.66□□□□□ -1.98
CAP1YKL007W STP2P38704 541 aa2.66□□□□□ -1.98
CAP1YKL007W LSM12P38828 187 aaKnown RBP2.66□□□□□ -1.98
CAP1YKL007W FAD1P38913 306 aa2.66□□□□□ -1.98
CAP1YKL007W ALD5P40047 520 aaKnown RBP2.66□□□□□ -1.98
CAP1YKL007W PAC11P40960 533 aa2.66□□□□□ -1.98
CAP1YKL007W PCL9Q12477 304 aa2.66□□□□□ -1.98
CAP1YKL007W REV3P14284 1504 aa2.66□□□□□ -1.98
CAP1YKL007W SIN3P22579 1536 aa2.66□□□□□ -1.98
CAP1YKL007W RPL12AP0CX53 165 aaKnown RBP2.65□□□□□ -1.99
CAP1YKL007W RPL12BP0CX54 165 aa2.65□□□□□ -1.99
CAP1YKL007W PHO91P27514 894 aa2.65□□□□□ -1.99
CAP1YKL007W NRP1P32770 719 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
CAP1YKL007W IGD1P43598 195 aa2.65□□□□□ -1.99
CAP1YKL007W CIK1Q01649 594 aa2.65□□□□□ -1.99
CAP1YKL007W YMR010WQ03687 405 aa2.65□□□□□ -1.99
CAP1YKL007W HMS1Q12398 434 aa2.65□□□□□ -1.99
CAP1YKL007W SMC6Q12749 1114 aa2.65□□□□□ -1.99
CAP1YKL007W SSK2P53599 1579 aa2.65□□□□□ -1.99
CAP1YKL007W FAB1P34756 2278 aa2.65□□□□□ -1.99
CAP1YKL007W GIT1P25346 518 aa2.64□□□□□ -1.99
CAP1YKL007W DPH2P32461 534 aa2.64□□□□□ -1.99
CAP1YKL007W TIR2P33890 251 aa2.64□□□□□ -1.99
CAP1YKL007W GPX2P38143 162 aa2.64□□□□□ -1.99
CAP1YKL007W QDR3P38227 689 aa2.64□□□□□ -1.99
CAP1YKL007W SRP72P38688 640 aaKnown RBP2.64□□□□□ -1.99
CAP1YKL007W GEP4P38812 185 aa2.64□□□□□ -1.99
CAP1YKL007W GPI16P38875 610 aa2.64□□□□□ -1.99
CAP1YKL007W SEC9P40357 651 aa2.64□□□□□ -1.99
CAP1YKL007W YGL262WP53054 175 aa2.64□□□□□ -1.99
CAP1YKL007W YIP5P53108 310 aa2.64□□□□□ -1.99
CAP1YKL007W FLC3P53121 802 aa2.64□□□□□ -1.99
CAP1YKL007W YPL107WQ02873 248 aa2.64□□□□□ -1.99
CAP1YKL007W NDL1Q06568 189 aa2.64□□□□□ -1.99
CAP1YKL007W IES4Q08561 116 aa2.64□□□□□ -1.99
CAP1YKL007W RNH203Q12338 110 aa2.64□□□□□ -1.99
CAP1YKL007W YDL199CQ12407 687 aa2.64□□□□□ -1.99
CAP1YKL007W CCH1P50077 2039 aa2.64□□□□□ -1.99
CAP1YKL007W PFS1P38872 237 aa2.63□□□□□ -1.99
CAP1YKL007W YML6P51998 286 aa2.63□□□□□ -1.99
CAP1YKL007W VPS9P54787 451 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms