RNA–Protein interactions for RNA: YDR388W

RVS167, Transcript of Actin-associated protein with roles in endocytosis and exocytosis, yeast

Gene RVS167, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVS167	YDR388W	ATG17	Q06410	417 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	YOR365C	Q08844	703 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	YOR214C	Q12282	236 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	DAL82	P21705	255 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	RPN2	P32565	945 aa	Known RBP	13.98	□□□□□ -0.17
RVS167	YDR388W	RPS27A	P35997	82 aa	Known RBP	13.98	□□□□□ -0.17
RVS167	YDR388W	YBR285W	P38354	144 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	RPS27B	P38711	82 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	TDA11	P38854	504 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	YFL066C	P43538	392 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	CAK1	P43568	368 aa	Predicted RBP	13.98	□□□□□ -0.17
RVS167	YDR388W	BIT61	P47041	543 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	NAT4	Q04751	285 aa		13.98	□□□□□ -0.17
RVS167	YDR388W	HFA1	P32874	2273 aa		13.97	□□□□□ -0.17
RVS167	YDR388W	MRPS28	P21771	286 aa		13.97	□□□□□ -0.17
RVS167	YDR388W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	13.97	□□□□□ -0.17	not detected
RVS167	YDR388W	FES1	P38260	290 aa		13.97	□□□□□ -0.17
RVS167	YDR388W	UME6	P39001	836 aa		13.97	□□□□□ -0.17
RVS167	YDR388W	FMP52	P40008	231 aa		13.97	□□□□□ -0.17
RVS167	YDR388W	DAM1	P53267	343 aa		13.97	□□□□□ -0.17
RVS167	YDR388W	GUP2	Q08929	609 aa		13.97	□□□□□ -0.17
RVS167	YDR388W	YPL066W	Q12194	479 aa		13.97	□□□□□ -0.17
RVS167	YDR388W	TIF3	P34167	436 aa	Known RBP	13.96	□□□□□ -0.18
RVS167	YDR388W	ECM8	P38246	354 aa		13.96	□□□□□ -0.18
RVS167	YDR388W	VPS52	P39904	641 aa		13.96	□□□□□ -0.18
RVS167	YDR388W	ICE2	P40499	491 aa		13.96	□□□□□ -0.18
RVS167	YDR388W	NUP57	P48837	541 aa		13.96	□□□□□ -0.18
RVS167	YDR388W	YGR266W	P53326	701 aa		13.96	□□□□□ -0.18
RVS167	YDR388W	TMA20	P89886	181 aa	Predicted RBP	13.96	□□□□□ -0.18
RVS167	YDR388W	NKP1	Q12493	238 aa		13.96	□□□□□ -0.18
RVS167	YDR388W	ACC1	Q00955	2233 aa	Known RBP	13.95	□□□□□ -0.18
RVS167	YDR388W	COG3	P40094	801 aa		13.95	□□□□□ -0.18
RVS167	YDR388W	MSS2	P40990	351 aa		13.95	□□□□□ -0.18
RVS167	YDR388W	MTQ1	P53944	314 aa		13.95	□□□□□ -0.18
RVS167	YDR388W	TPS1	Q00764	495 aa	Known RBP	13.95	□□□□□ -0.18
RVS167	YDR388W	YPR174C	Q06616	221 aa	Predicted RBP	13.95	□□□□□ -0.18
RVS167	YDR388W	PIN2	Q12057	282 aa		13.95	□□□□□ -0.18
RVS167	YDR388W	REX3	Q12090	404 aa		13.95	□□□□□ -0.18
RVS167	YDR388W	AI4	P03878	556 aa		13.94	□□□□□ -0.18
RVS167	YDR388W	MKK2	P32491	506 aa		13.94	□□□□□ -0.18
RVS167	YDR388W	PTR2	P32901	601 aa		13.94	□□□□□ -0.18
RVS167	YDR388W	RIM101	P33400	625 aa		13.94	□□□□□ -0.18
RVS167	YDR388W	YIL152W	P40455	235 aa		13.94	□□□□□ -0.18
RVS167	YDR388W	ALB1	P47019	175 aa	Predicted RBP	13.94	□□□□□ -0.18
RVS167	YDR388W	NFI1	Q12216	726 aa		13.94	□□□□□ -0.18
RVS167	YDR388W	DBP10	Q12389	995 aa	Known RBP	13.94	□□□□□ -0.18
RVS167	YDR388W	HOM3	P10869	527 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	MXR2	P25566	168 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	PBN1	P25580	416 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	GSH1	P32477	678 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	PRP21	P32524	280 aa	Predicted RBP	13.93	□□□□□ -0.18
RVS167	YDR388W	LST4	P34239	828 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	YLF2	P38746	405 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	SPG5	P42933	373 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	MPC1	P53157	130 aa	Known RBP	13.93	□□□□□ -0.18
RVS167	YDR388W	YSA1	Q01976	231 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	YMR099C	Q03161	297 aa	Known RBP	13.93	□□□□□ -0.18
RVS167	YDR388W	RNH202	Q05635	350 aa		13.93	□□□□□ -0.18
RVS167	YDR388W	RPS21B	Q3E754	87 aa	Known RBP	13.93	□□□□□ -0.18
RVS167	YDR388W	TPK3	P05986	398 aa		13.92	□□□□□ -0.18
RVS167	YDR388W	YOL163W	P0CF20	169 aa		13.92	□□□□□ -0.18
RVS167	YDR388W	CDC26	P14724	124 aa		13.92	□□□□□ -0.18
RVS167	YDR388W	RHB1	P25378	209 aa		13.92	□□□□□ -0.18
RVS167	YDR388W	TOD6	P34219	525 aa		13.92	□□□□□ -0.18
RVS167	YDR388W	URC2	Q04411	772 aa		13.92	□□□□□ -0.18
RVS167	YDR388W	YLR126C	Q12288	251 aa		13.92	□□□□□ -0.18
RVS167	YDR388W	BRR2	P32639	2163 aa	Known RBP	13.92	□□□□□ -0.18
RVS167	YDR388W	MCK1	P21965	375 aa	Known RBP	13.91	□□□□□ -0.18
RVS167	YDR388W	BUD5	P25300	642 aa	Predicted RBP	13.91	□□□□□ -0.18
RVS167	YDR388W	SPT20	P50875	604 aa		13.91	□□□□□ -0.18
RVS167	YDR388W	VPS36	Q06696	566 aa		13.91	□□□□□ -0.18
RVS167	YDR388W	EXO84	P38261	753 aa		13.9	□□□□□ -0.18
RVS167	YDR388W	OCA5	P38738	679 aa		13.9	□□□□□ -0.18
RVS167	YDR388W	SSZ1	P38788	538 aa	Known RBP	13.9	□□□□□ -0.18
RVS167	YDR388W	EGD2	P38879	174 aa	Known RBP	13.9	□□□□□ -0.18
RVS167	YDR388W	ISC1	P40015	477 aa	Known RBP	13.9	□□□□□ -0.18
RVS167	YDR388W	PRE6	P40303	254 aa	Known RBP	13.9	□□□□□ -0.18
RVS167	YDR388W	YTA6	P40328	754 aa		13.9	□□□□□ -0.18
RVS167	YDR388W	JHD2	P47156	728 aa	Predicted RBP	13.9	□□□□□ -0.18
RVS167	YDR388W	VID22	Q05934	901 aa		13.9	□□□□□ -0.18
RVS167	YDR388W	MOD5	P07884	428 aa		13.9	□□□□□ -0.19
RVS167	YDR388W	PMT2	P31382	759 aa		13.9	□□□□□ -0.19
RVS167	YDR388W	YJR141W	P47172	347 aa	Predicted RBP	13.9	□□□□□ -0.19
RVS167	YDR388W	SLD3	P53135	668 aa		13.9	□□□□□ -0.19
RVS167	YDR388W	TPC1	P53257	314 aa		13.9	□□□□□ -0.19
RVS167	YDR388W	SMP3	Q04174	516 aa		13.9	□□□□□ -0.19
RVS167	YDR388W	NBA1	Q08229	501 aa	Known RBP	13.9	□□□□□ -0.19
RVS167	YDR388W	RPP2B	P02400	110 aa	Known RBP	13.89	□□□□□ -0.19
RVS167	YDR388W	TFS1	P14306	219 aa		13.89	□□□□□ -0.19
RVS167	YDR388W	HIR2	P32480	875 aa		13.89	□□□□□ -0.19
RVS167	YDR388W	YME2	P32843	850 aa		13.89	□□□□□ -0.19
RVS167	YDR388W	CTF8	P38877	133 aa		13.89	□□□□□ -0.19
RVS167	YDR388W	IMD4	P50094	524 aa	Known RBP	13.89	□□□□□ -0.19
RVS167	YDR388W	YAT1	P80235	687 aa		13.89	□□□□□ -0.19
RVS167	YDR388W	YPL068C	Q02749	293 aa		13.89	□□□□□ -0.19
RVS167	YDR388W	RSN1	Q03516	953 aa		13.89	□□□□□ -0.19
RVS167	YDR388W	YMR210W	Q03649	449 aa		13.89	□□□□□ -0.19
RVS167	YDR388W	GLK1	P17709	500 aa	Known RBP	13.88	□□□□□ -0.19
RVS167	YDR388W	CNA1	P23287	553 aa		13.88	□□□□□ -0.19
RVS167	YDR388W	NAR1	P23503	491 aa	Known RBP	13.88	□□□□□ -0.19

Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms