RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	SPT7	P35177	1332 aa		4.26	□□□□□ -1.73
LSM6	YDR378C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
LSM6	YDR378C	CLN3	P13365	580 aa		4.26	□□□□□ -1.73
LSM6	YDR378C	PHO84	P25297	587 aa	Known RBP	4.26	□□□□□ -1.73
LSM6	YDR378C	LAS1	P36146	502 aa	Predicted RBP	4.26	□□□□□ -1.73
LSM6	YDR378C	HAC1	P41546	238 aa		4.26	□□□□□ -1.73
LSM6	YDR378C	AIM24	P47127	394 aa		4.26	□□□□□ -1.73
LSM6	YDR378C	TRM112	P53738	135 aa	Predicted RBP	4.26	□□□□□ -1.73
LSM6	YDR378C	ASA1	Q06822	443 aa		4.26	□□□□□ -1.73
LSM6	YDR378C	CUE5	Q08412	411 aa	Known RBP	4.26	□□□□□ -1.73
LSM6	YDR378C	YGK3	Q12222	375 aa	Predicted RBP	4.26	□□□□□ -1.73
LSM6	YDR378C	ADH2	P00331	348 aa	Known RBP	4.25	□□□□□ -1.73
LSM6	YDR378C	SSC1	P0CS90	654 aa	Known RBP	4.25	□□□□□ -1.73
LSM6	YDR378C	CSE2	P33308	149 aa		4.25	□□□□□ -1.73
LSM6	YDR378C	MCR1	P36060	302 aa	Known RBP	4.25	□□□□□ -1.73
LSM6	YDR378C	LCB3	P47013	409 aa		4.25	□□□□□ -1.73
LSM6	YDR378C	PRM6	Q04705	352 aa		4.25	□□□□□ -1.73
LSM6	YDR378C	SMF3	Q12078	473 aa	Predicted RBP	4.25	□□□□□ -1.73
LSM6	YDR378C	NFI1	Q12216	726 aa		4.25	□□□□□ -1.73
LSM6	YDR378C	HTZ1	Q12692	134 aa	Known RBP	4.25	□□□□□ -1.73
LSM6	YDR378C	OPI1	P21957	404 aa		4.24	□□□□□ -1.73
LSM6	YDR378C	RVS161	P25343	265 aa	Known RBP	4.24	□□□□□ -1.73
LSM6	YDR378C	DPH5	P32469	300 aa	Predicted RBP	4.24	□□□□□ -1.73
LSM6	YDR378C	YEL045C	P32616	141 aa		4.24	□□□□□ -1.73
LSM6	YDR378C	RAD5	P32849	1169 aa	Predicted RBP	4.24	□□□□□ -1.73
LSM6	YDR378C	YJR085C	P47131	105 aa	Known RBP	4.24	□□□□□ -1.73
LSM6	YDR378C	FDH1	Q08911	376 aa		4.24	□□□□□ -1.73
LSM6	YDR378C	HRT3	Q12347	344 aa		4.24	□□□□□ -1.73
LSM6	YDR378C	MSI1	P13712	422 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	DAP2	P18962	818 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	FAA1	P30624	700 aa	Known RBP	4.23	□□□□□ -1.73
LSM6	YDR378C	SPT10	P35208	640 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	MRPL10	P36520	322 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	SWD3	P38123	315 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	GEP4	P38812	185 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	YFR057W	P43625	151 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	RTN1	Q04947	295 aa	Known RBP	4.23	□□□□□ -1.73
LSM6	YDR378C	JID1	Q12350	301 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	AHC1	Q12433	566 aa		4.23	□□□□□ -1.73
LSM6	YDR378C	RNA1	P11745	407 aa	Known RBP	4.22	□□□□□ -1.73
LSM6	YDR378C	UBA1	P22515	1024 aa	Known RBP	4.22	□□□□□ -1.73
LSM6	YDR378C	YHR177W	P38867	453 aa		4.22	□□□□□ -1.73
LSM6	YDR378C	TOS2	P50078	622 aa		4.22	□□□□□ -1.73
LSM6	YDR378C	SDT1	P53078	280 aa		4.22	□□□□□ -1.73
LSM6	YDR378C	RRN9	P53437	365 aa		4.22	□□□□□ -1.73
LSM6	YDR378C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
LSM6	YDR378C	RIF2	Q06208	395 aa		4.22	□□□□□ -1.73
LSM6	YDR378C	NOP6	Q07623	225 aa	Known RBP	4.22	□□□□□ -1.73
LSM6	YDR378C	PEX27	Q08580	376 aa		4.22	□□□□□ -1.73
LSM6	YDR378C	IZH2	Q12442	317 aa		4.22	□□□□□ -1.73
LSM6	YDR378C	YCR024C-B	Q3E7Z8	88 aa		4.22	□□□□□ -1.73
LSM6	YDR378C	REV1	P12689	985 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	RPB5	P20434	215 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	TIR2	P33890	251 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	GPX2	P38143	162 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	YHK8	P38776	514 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	YHR131C	P38835	850 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	MST27	P53176	234 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	COS1	P53822	381 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	TDA1	Q03533	586 aa		4.21	□□□□□ -1.74
LSM6	YDR378C	WTM1	Q12363	437 aa	Known RBP	4.21	□□□□□ -1.74
LSM6	YDR378C	SCH9	P11792	824 aa	Known RBP	4.2	□□□□□ -1.74
LSM6	YDR378C	ISY1	P21374	235 aa	Predicted RBP	4.2	□□□□□ -1.74
LSM6	YDR378C	PRR1	P28708	518 aa		4.2	□□□□□ -1.74
LSM6	YDR378C	TOA2	P32774	122 aa		4.2	□□□□□ -1.74
LSM6	YDR378C	YOX1	P34161	385 aa		4.2	□□□□□ -1.74
LSM6	YDR378C	ADH5	P38113	351 aa	Known RBP	4.2	□□□□□ -1.74
LSM6	YDR378C	ECM8	P38246	354 aa		4.2	□□□□□ -1.74
LSM6	YDR378C	MPS2	P53159	387 aa		4.2	□□□□□ -1.74
LSM6	YDR378C	YNR068C	P53754	272 aa		4.2	□□□□□ -1.74
LSM6	YDR378C	MRPL8	P22353	238 aa		4.19	□□□□□ -1.74
LSM6	YDR378C	PSO2	P30620	661 aa		4.19	□□□□□ -1.74
LSM6	YDR378C	CAJ1	P39101	391 aa		4.19	□□□□□ -1.74
LSM6	YDR378C	SNL1	P40548	159 aa		4.19	□□□□□ -1.74
LSM6	YDR378C	RPA34	P47006	233 aa	Predicted RBP	4.19	□□□□□ -1.74
LSM6	YDR378C	BIR1	P47134	954 aa		4.19	□□□□□ -1.74
LSM6	YDR378C	CLD1	P53264	445 aa		4.19	□□□□□ -1.74
LSM6	YDR378C	YMR027W	Q04371	470 aa		4.19	□□□□□ -1.74
LSM6	YDR378C	DBP9	Q06218	594 aa	Known RBP	4.19	□□□□□ -1.74
LSM6	YDR378C	PLP2	Q12017	286 aa		4.19	□□□□□ -1.74
LSM6	YDR378C	MEX67	Q99257	599 aa	Known RBP	4.19	□□□□□ -1.74
LSM6	YDR378C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
LSM6	YDR378C	AIM10	P39965	576 aa	Known RBP	4.18	□□□□□ -1.74
LSM6	YDR378C	YNL208W	P40159	199 aa	Known RBP	4.18	□□□□□ -1.74
LSM6	YDR378C	ATP22	P50273	684 aa	Predicted RBP	4.18	□□□□□ -1.74
LSM6	YDR378C	YGR016W	P53209	190 aa		4.18	□□□□□ -1.74
LSM6	YDR378C	YPR091C	Q06833	770 aa		4.18	□□□□□ -1.74
LSM6	YDR378C	CMS1	Q07897	291 aa	Known RBP	4.18	□□□□□ -1.74
LSM6	YDR378C	RBD2	Q12270	262 aa		4.18	□□□□□ -1.74
LSM6	YDR378C	NBL1	Q3E7Y6	73 aa		4.18	□□□□□ -1.74
LSM6	YDR378C	LDB16	P25587	256 aa		4.17	□□□□□ -1.74
LSM6	YDR378C	RDS1	P25611	832 aa		4.17	□□□□□ -1.74
LSM6	YDR378C	MSK1	P32048	576 aa		4.17	□□□□□ -1.74
LSM6	YDR378C	SIF2	P38262	535 aa		4.17	□□□□□ -1.74
LSM6	YDR378C	PRE5	P40302	234 aa	Known RBP	4.17	□□□□□ -1.74
LSM6	YDR378C	SEC27	P41811	889 aa	Known RBP	4.17	□□□□□ -1.74
LSM6	YDR378C	AQR1	P53943	586 aa		4.17	□□□□□ -1.74
LSM6	YDR378C	YMR010W	Q03687	405 aa		4.17	□□□□□ -1.74
LSM6	YDR378C	FCY22	Q12119	530 aa		4.17	□□□□□ -1.74
LSM6	YDR378C	PCL9	Q12477	304 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms