RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W ALG1P16661 449 aa1.28□□□□□ -2.2
CDC36YDL165W EST1P17214 699 aaPredicted RBP1.28□□□□□ -2.2
CDC36YDL165W RPO26P20435 155 aa1.28□□□□□ -2.2
CDC36YDL165W CKI1P20485 582 aa1.28□□□□□ -2.2
CDC36YDL165W UTR1P21373 530 aa1.28□□□□□ -2.2
CDC36YDL165W RPI1P23250 407 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W VMA16P23968 213 aa1.28□□□□□ -2.2
CDC36YDL165W SPS22P25380 463 aa1.28□□□□□ -2.2
CDC36YDL165W PEP3P27801 918 aa1.28□□□□□ -2.2
CDC36YDL165W SIN4P32259 974 aa1.28□□□□□ -2.2
CDC36YDL165W VMA6P32366 345 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W HXT3P32466 567 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W GDH2P33327 1092 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W MYO3P36006 1272 aa1.28□□□□□ -2.2
CDC36YDL165W NUP133P36161 1157 aa1.28□□□□□ -2.2
CDC36YDL165W NAT2P37293 288 aa1.28□□□□□ -2.2
CDC36YDL165W HEK2P38199 381 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
CDC36YDL165W SRP72P38688 640 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W TRM5P38793 499 aa1.28□□□□□ -2.2
CDC36YDL165W EGD2P38879 174 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W AFG3P39925 761 aa1.28□□□□□ -2.2
CDC36YDL165W DDI1P40087 428 aa1.28□□□□□ -2.2
CDC36YDL165W SLZ1P40167 298 aa1.28□□□□□ -2.2
CDC36YDL165W HYR1P40581 163 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W FAR7P43592 221 aa1.28□□□□□ -2.2
CDC36YDL165W AIP1P46680 615 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W DPB11P47027 764 aaPredicted RBP1.28□□□□□ -2.2
CDC36YDL165W RPC17P47076 161 aa1.28□□□□□ -2.2
CDC36YDL165W YJR141WP47172 347 aaPredicted RBP1.28□□□□□ -2.2
CDC36YDL165W CCC1P47818 322 aa1.28□□□□□ -2.2
CDC36YDL165W GTO1P48239 356 aa1.28□□□□□ -2.2
CDC36YDL165W UPF3P48412 387 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W HSH155P49955 971 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W MND1P53102 219 aa1.28□□□□□ -2.2
CDC36YDL165W MRM2P53123 320 aa1.28□□□□□ -2.2
CDC36YDL165W NSA1P53136 463 aaPredicted RBP1.28□□□□□ -2.2
CDC36YDL165W DUO1P53168 247 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W YGR042WP53227 271 aa1.28□□□□□ -2.2
CDC36YDL165W OKP1P53298 406 aa1.28□□□□□ -2.2
CDC36YDL165W BUD32P53323 261 aa1.28□□□□□ -2.2
CDC36YDL165W MAL13P53338 473 aa1.28□□□□□ -2.2
CDC36YDL165W SSU72P53538 206 aaPredicted RBP1.28□□□□□ -2.2
CDC36YDL165W ZRG17P53735 605 aa1.28□□□□□ -2.2
CDC36YDL165W MNT4P53745 580 aa1.28□□□□□ -2.2
CDC36YDL165W YNR068CP53754 272 aa1.28□□□□□ -2.2
CDC36YDL165W PGA2P53903 129 aa1.28□□□□□ -2.2
CDC36YDL165W KTR5P53966 522 aaPredicted RBP1.28□□□□□ -2.2
CDC36YDL165W KTR6P54070 446 aa1.28□□□□□ -2.2
CDC36YDL165W TIM10P87108 93 aa1.28□□□□□ -2.2
CDC36YDL165W PET117Q02771 107 aa1.28□□□□□ -2.2
CDC36YDL165W YML037CQ03703 340 aa1.28□□□□□ -2.2
CDC36YDL165W PRP42Q03776 544 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W YDR131CQ03899 556 aa1.28□□□□□ -2.2
CDC36YDL165W SNX41Q04053 625 aa1.28□□□□□ -2.2
CDC36YDL165W BNA7Q04066 261 aa1.28□□□□□ -2.2
CDC36YDL165W PPM1Q04081 328 aa1.28□□□□□ -2.2
CDC36YDL165W YMR114CQ04471 368 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W COX20Q04935 205 aa1.28□□□□□ -2.2
CDC36YDL165W RTN1Q04947 295 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W BCH1Q05029 724 aa1.28□□□□□ -2.2
CDC36YDL165W FAR10Q06001 478 aa1.28□□□□□ -2.2
CDC36YDL165W YLR345WQ06137 509 aa1.28□□□□□ -2.2
CDC36YDL165W BCP1Q06338 283 aa1.28□□□□□ -2.2
CDC36YDL165W PHO92Q06390 306 aa1.28□□□□□ -2.2
CDC36YDL165W ECM30Q06673 1274 aa1.28□□□□□ -2.2
CDC36YDL165W LUC7Q07508 261 aaPredicted RBP1.28□□□□□ -2.2
CDC36YDL165W TEN1Q07921 160 aa1.28□□□□□ -2.2
CDC36YDL165W DIS3Q08162 1001 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W ZEO1Q08245 113 aa1.28□□□□□ -2.2
CDC36YDL165W ESA1Q08649 445 aa1.28□□□□□ -2.2
CDC36YDL165W RPN8Q08723 338 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W MUM3Q08750 479 aa1.28□□□□□ -2.2
CDC36YDL165W DDC1Q08949 612 aa1.28□□□□□ -2.2
CDC36YDL165W RUP1Q12242 671 aa1.28□□□□□ -2.2
CDC36YDL165W RPN5Q12250 445 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W INP53Q12271 1107 aa1.28□□□□□ -2.2
CDC36YDL165W EMP46Q12396 444 aa1.28□□□□□ -2.2
CDC36YDL165W SKS1Q12505 502 aa1.28□□□□□ -2.2
CDC36YDL165W PGA3Q12746 312 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W NCB2Q92317 146 aa1.28□□□□□ -2.2
CDC36YDL165W YLR419WQ06698 1435 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W MYO4P32492 1471 aa1.28□□□□□ -2.2
CDC36YDL165W YPK9Q12697 1472 aa1.28□□□□□ -2.2
CDC36YDL165W TAF2P23255 1407 aa1.27□□□□□ -2.21
CDC36YDL165W NUP157P40064 1391 aaKnown RBP1.27□□□□□ -2.21
CDC36YDL165W TDH1P00360 332 aaKnown RBP1.27□□□□□ -2.21
CDC36YDL165W RPL25P04456 142 aaKnown RBP1.27□□□□□ -2.21
CDC36YDL165W RAD7P06779 565 aa1.27□□□□□ -2.21
CDC36YDL165W CAR2P07991 424 aaKnown RBP1.27□□□□□ -2.21
CDC36YDL165W CHS1P08004 1131 aa1.27□□□□□ -2.21
CDC36YDL165W FUM1P08417 488 aaKnown RBP1.27□□□□□ -2.21
CDC36YDL165W MET2P08465 486 aa1.27□□□□□ -2.21
CDC36YDL165W MAS1P10507 462 aa1.27□□□□□ -2.21
CDC36YDL165W GPA2P10823 449 aa1.27□□□□□ -2.21
CDC36YDL165W MRP13P12686 339 aa1.27□□□□□ -2.21
CDC36YDL165W NSP1P14907 823 aaKnown RBP1.27□□□□□ -2.21
CDC36YDL165W HSP26P15992 214 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
CDC36YDL165W PDX1P16451 410 aa1.27□□□□□ -2.21
CDC36YDL165W CBF1P17106 351 aa1.27□□□□□ -2.21
CDC36YDL165W RAD57P25301 460 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms