RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA2	YKR077W	NAM2	P11325	894 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	INM1	P38710	295 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	SBE22	P38814	852 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	COX14	P39103	70 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	CHS6	P40955	746 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	MTQ1	P53944	314 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	VPS9	P54787	451 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	MHR1	Q06630	226 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	SPE3	Q12074	293 aa	Known RBP	4.29	□□□□□ -1.72
MSA2	YKR077W	CEX1	Q12453	761 aa		4.29	□□□□□ -1.72
MSA2	YKR077W	PDE2	P06776	526 aa		4.28	□□□□□ -1.72
MSA2	YKR077W	ALG1	P16661	449 aa		4.28	□□□□□ -1.72
MSA2	YKR077W	PHA2	P32452	334 aa		4.28	□□□□□ -1.72
MSA2	YKR077W	CSE2	P33308	149 aa		4.28	□□□□□ -1.72
MSA2	YKR077W	STP2	P38704	541 aa		4.28	□□□□□ -1.72
MSA2	YKR077W	MMF1	P40185	145 aa	Known RBP	4.28	□□□□□ -1.72
MSA2	YKR077W	TOS3	P43637	560 aa		4.28	□□□□□ -1.72
MSA2	YKR077W	MDM36	Q06820	579 aa		4.28	□□□□□ -1.72
MSA2	YKR077W	WTM1	Q12363	437 aa	Known RBP	4.28	□□□□□ -1.72
MSA2	YKR077W	SPR1	P32603	445 aa		4.27	□□□□□ -1.73
MSA2	YKR077W	SKN1	P33336	771 aa		4.27	□□□□□ -1.73
MSA2	YKR077W	YKL097C	P34245	136 aa		4.27	□□□□□ -1.73
MSA2	YKR077W	LRP1	P38801	184 aa	Known RBP	4.27	□□□□□ -1.73
MSA2	YKR077W	GPI16	P38875	610 aa		4.27	□□□□□ -1.73
MSA2	YKR077W	LCB2	P40970	561 aa		4.27	□□□□□ -1.73
MSA2	YKR077W	YJR085C	P47131	105 aa	Known RBP	4.27	□□□□□ -1.73
MSA2	YKR077W	ADD37	Q03233	198 aa		4.27	□□□□□ -1.73
MSA2	YKR077W	SXM1	Q04175	944 aa	Known RBP	4.27	□□□□□ -1.73
MSA2	YKR077W	YMR027W	Q04371	470 aa		4.27	□□□□□ -1.73
MSA2	YKR077W	NSE1	Q07913	336 aa		4.27	□□□□□ -1.73
MSA2	YKR077W	RPN5	Q12250	445 aa	Known RBP	4.27	□□□□□ -1.73
MSA2	YKR077W	CAP2	P13517	287 aa		4.26	□□□□□ -1.73
MSA2	YKR077W	EXG1	P23776	448 aa	Known RBP	4.26	□□□□□ -1.73
MSA2	YKR077W	MRPL10	P36520	322 aa		4.26	□□□□□ -1.73
MSA2	YKR077W	YJL055W	P47044	245 aa		4.26	□□□□□ -1.73
MSA2	YKR077W	MRM2	P53123	320 aa		4.26	□□□□□ -1.73
MSA2	YKR077W	ATP1	P07251	545 aa	Known RBP	4.25	□□□□□ -1.73
MSA2	YKR077W	PHO91	P27514	894 aa		4.25	□□□□□ -1.73
MSA2	YKR077W	PEX5	P35056	612 aa		4.25	□□□□□ -1.73
MSA2	YKR077W	ROG1	P53118	685 aa		4.25	□□□□□ -1.73
MSA2	YKR077W	YGL039W	P53183	348 aa	Known RBP	4.25	□□□□□ -1.73
MSA2	YKR077W	SHY1	P53266	389 aa		4.25	□□□□□ -1.73
MSA2	YKR077W	YLR152C	P54072	576 aa		4.25	□□□□□ -1.73
MSA2	YKR077W	MNE1	P24720	663 aa		4.24	□□□□□ -1.73
MSA2	YKR077W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
MSA2	YKR077W	COX13	P32799	129 aa		4.24	□□□□□ -1.73
MSA2	YKR077W	QDR3	P38227	689 aa		4.24	□□□□□ -1.73
MSA2	YKR077W	YHR131C	P38835	850 aa		4.24	□□□□□ -1.73
MSA2	YKR077W	TIS11	P47977	285 aa		4.24	□□□□□ -1.73
MSA2	YKR077W	ADA2	Q02336	434 aa		4.24	□□□□□ -1.73
MSA2	YKR077W	YGK3	Q12222	375 aa	Predicted RBP	4.24	□□□□□ -1.73
MSA2	YKR077W	IZH2	Q12442	317 aa		4.24	□□□□□ -1.73
MSA2	YKR077W	PAR32	Q12515	295 aa	Known RBP	4.24	□□□□□ -1.73
MSA2	YKR077W	YEF1	P32622	495 aa		4.23	□□□□□ -1.73
MSA2	YKR077W	AIM10	P39965	576 aa	Known RBP	4.23	□□□□□ -1.73
MSA2	YKR077W	EFM4	P40516	257 aa		4.23	□□□□□ -1.73
MSA2	YKR077W	RRP46	P53256	223 aa	Predicted RBP	4.23	□□□□□ -1.73
MSA2	YKR077W	RIF2	Q06208	395 aa		4.23	□□□□□ -1.73
MSA2	YKR077W	NDL1	Q06568	189 aa		4.23	□□□□□ -1.73
MSA2	YKR077W	CUE5	Q08412	411 aa	Known RBP	4.23	□□□□□ -1.73
MSA2	YKR077W	JID1	Q12350	301 aa		4.23	□□□□□ -1.73
MSA2	YKR077W	AHC1	Q12433	566 aa		4.23	□□□□□ -1.73
MSA2	YKR077W	POM152	P39685	1337 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	RPL1A	P0CX43	217 aa	Known RBP	4.22	□□□□□ -1.73
MSA2	YKR077W	RPL1B	P0CX44	217 aa	Known RBP	4.22	□□□□□ -1.73
MSA2	YKR077W	MSI1	P13712	422 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	SLM5	P25345	492 aa	Known RBP	4.22	□□□□□ -1.73
MSA2	YKR077W	DPH5	P32469	300 aa	Predicted RBP	4.22	□□□□□ -1.73
MSA2	YKR077W	PAC11	P40960	533 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	LCB3	P47013	409 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	YGR117C	P53270	476 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	ALF1	P53904	254 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	YDR541C	Q03049	344 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	PRP3	Q03338	469 aa	Predicted RBP	4.22	□□□□□ -1.73
MSA2	YKR077W	RTN1	Q04947	295 aa	Known RBP	4.22	□□□□□ -1.73
MSA2	YKR077W	LOT6	Q07923	191 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	SMC5	Q08204	1093 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	PLP2	Q12017	286 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	RNH203	Q12338	110 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	EAF3	Q12432	401 aa		4.22	□□□□□ -1.73
MSA2	YKR077W	YSC83	P32792	385 aa		4.21	□□□□□ -1.74
MSA2	YKR077W	SKT5	P34226	696 aa		4.21	□□□□□ -1.74
MSA2	YKR077W	GDI1	P39958	451 aa	Known RBP	4.21	□□□□□ -1.74
MSA2	YKR077W	UTP18	P40362	594 aa	Predicted RBP	4.21	□□□□□ -1.74
MSA2	YKR077W	MAM33	P40513	266 aa		4.21	□□□□□ -1.74
MSA2	YKR077W	AIM24	P47127	394 aa		4.21	□□□□□ -1.74
MSA2	YKR077W	COS1	P53822	381 aa		4.21	□□□□□ -1.74
MSA2	YKR077W	SPR6	Q01684	191 aa		4.21	□□□□□ -1.74
MSA2	YKR077W	YMR102C	Q03177	834 aa		4.21	□□□□□ -1.74
MSA2	YKR077W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
MSA2	YKR077W	OPI3	P05375	206 aa		4.2	□□□□□ -1.74
MSA2	YKR077W	PIS1	P06197	220 aa	Known RBP	4.2	□□□□□ -1.74
MSA2	YKR077W	RPB5	P20434	215 aa		4.2	□□□□□ -1.74
MSA2	YKR077W	MDL1	P33310	695 aa		4.2	□□□□□ -1.74
MSA2	YKR077W	ATM1	P40416	690 aa		4.2	□□□□□ -1.74
MSA2	YKR077W	HAC1	P41546	238 aa		4.2	□□□□□ -1.74
MSA2	YKR077W	GAB1	P41733	394 aa		4.2	□□□□□ -1.74
MSA2	YKR077W	YFR057W	P43625	151 aa		4.2	□□□□□ -1.74
MSA2	YKR077W	STE24	P47154	453 aa		4.2	□□□□□ -1.74
MSA2	YKR077W	MEH1	Q02205	184 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms