RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	MRPL8	P22353	238 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	PTC6	P25646	442 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	NIP1	P32497	812 aa	Known RBP	6.16	□□□□□ -1.42
TIF1	YKR059W	RPL32	P38061	130 aa	Known RBP	6.16	□□□□□ -1.42
TIF1	YKR059W	URA8	P38627	578 aa	Predicted RBP	6.16	□□□□□ -1.42
TIF1	YKR059W	RIX1	P38883	763 aa	Predicted RBP	6.16	□□□□□ -1.42
TIF1	YKR059W	YHR218W	P38899	603 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	GLG2	P47011	380 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	YML096W	Q04489	525 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	YPR078C	Q06813	372 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	ATG9	Q12142	997 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	RKM5	Q12367	367 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	YOR338W	Q99326	363 aa		6.16	□□□□□ -1.42
TIF1	YKR059W	PRP6	P19735	899 aa	Predicted RBP	6.15	□□□□□ -1.42
TIF1	YKR059W	DAL82	P21705	255 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	AAT2	P23542	418 aa	Known RBP	6.15	□□□□□ -1.42
TIF1	YKR059W	AFG1	P32317	509 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	SUR1	P33300	382 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	RIB7	P33312	244 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	OMA1	P36163	345 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	ADH5	P38113	351 aa	Known RBP	6.15	□□□□□ -1.42
TIF1	YKR059W	THI2	P38141	450 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	SWC5	P38326	303 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	NAS2	P40555	220 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	SHE4	P51534	789 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	COG7	P53195	279 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	ERG26	P53199	349 aa	Known RBP	6.15	□□□□□ -1.42
TIF1	YKR059W	YGR266W	P53326	701 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	RSM10	Q03201	203 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	NOP6	Q07623	225 aa	Known RBP	6.15	□□□□□ -1.42
TIF1	YKR059W	PML1	Q07930	204 aa	Predicted RBP	6.15	□□□□□ -1.42
TIF1	YKR059W	YLR049C	Q12110	428 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	GLT1	Q12680	2145 aa	Known RBP	6.15	□□□□□ -1.42
TIF1	YKR059W	YIL002W-A	Q3E7Z5	69 aa		6.15	□□□□□ -1.42
TIF1	YKR059W	YKR104W	P0CE69	306 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	RAP1	P11938	827 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	SPT15	P13393	240 aa	Known RBP	6.14	□□□□□ -1.43
TIF1	YKR059W	TAL1	P15019	335 aa	Known RBP	6.14	□□□□□ -1.43
TIF1	YKR059W	GAS1	P22146	559 aa	Known RBP	6.14	□□□□□ -1.43
TIF1	YKR059W	SNT1	P25357	1226 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	HRR25	P29295	494 aa	Known RBP	6.14	□□□□□ -1.43
TIF1	YKR059W	MRPL4	P36517	319 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	TSC10	P38342	320 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	RRP3	P38712	501 aa	Known RBP	6.14	□□□□□ -1.43
TIF1	YKR059W	YER189W	P40104	122 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	BUL1	P48524	976 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	YNL247W	P53852	767 aa	Known RBP	6.14	□□□□□ -1.43
TIF1	YKR059W	YMR178W	Q03219	274 aa	Known RBP	6.14	□□□□□ -1.43
TIF1	YKR059W	RAD33	Q04231	177 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	RPC11	Q04307	110 aa	Predicted RBP	6.14	□□□□□ -1.43
TIF1	YKR059W	YFH1	Q07540	174 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	TRM13	Q12383	476 aa		6.14	□□□□□ -1.43
TIF1	YKR059W	RHO2	P06781	192 aa		6.13	□□□□□ -1.43
TIF1	YKR059W	PET111	P08468	800 aa		6.13	□□□□□ -1.43
TIF1	YKR059W	GSY2	P27472	705 aa		6.13	□□□□□ -1.43
TIF1	YKR059W	PHO91	P27514	894 aa		6.13	□□□□□ -1.43
TIF1	YKR059W	PCL5	P38794	229 aa		6.13	□□□□□ -1.43
TIF1	YKR059W	BPL1	P48445	690 aa	Predicted RBP	6.13	□□□□□ -1.43
TIF1	YKR059W	ERV25	P54837	211 aa	Known RBP	6.13	□□□□□ -1.43
TIF1	YKR059W	SMX3	P54999	86 aa	Predicted RBP	6.13	□□□□□ -1.43
TIF1	YKR059W	YPR114W	Q06107	315 aa		6.13	□□□□□ -1.43
TIF1	YKR059W	DCS1	Q06151	350 aa		6.13	□□□□□ -1.43
TIF1	YKR059W	PFK27	Q12471	397 aa	Predicted RBP	6.13	□□□□□ -1.43
TIF1	YKR059W	BRR1	Q99177	341 aa	Predicted RBP	6.13	□□□□□ -1.43
TIF1	YKR059W	MTR10	Q99189	972 aa		6.13	□□□□□ -1.43
TIF1	YKR059W	GPH1	P06738	902 aa	Known RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	YMR085W	P0CF18	432 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	PTP1	P25044	335 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	BUD5	P25300	642 aa	Predicted RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	RPC25	P35718	212 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	YET1	P35723	206 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	IMD2	P38697	523 aa	Known RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	YDR089W	P38966	869 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	YIL054W	P40524	105 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	MKT1	P40850	830 aa	Known RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	ALK1	P43633	760 aa	Known RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	RPS10B	P46784	105 aa	Known RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	RMD9	P53140	646 aa	Known RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	PFA5	Q03289	374 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	YDR222W	Q04925	415 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	RPS10A	Q08745	105 aa	Predicted RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	MRH1	Q12117	320 aa	Predicted RBP	6.12	□□□□□ -1.43
TIF1	YKR059W	UBX3	Q12229	455 aa		6.12	□□□□□ -1.43
TIF1	YKR059W	ADY2	P25613	283 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	YIM1	P28625	365 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	ZTA1	P38230	334 aa	Known RBP	6.11	□□□□□ -1.43
TIF1	YKR059W	TAE1	P38340	232 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	FAD1	P38913	306 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	RPH1	P39956	796 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	EMC4	P53073	190 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	YGR126W	P53274	230 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	CPR8	P53728	308 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	VAM3	Q12241	283 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	NTO1	Q12311	748 aa		6.11	□□□□□ -1.43
TIF1	YKR059W	NDI1	P32340	513 aa		6.1	□□□□□ -1.43
TIF1	YKR059W	SPC110	P32380	944 aa		6.1	□□□□□ -1.43
TIF1	YKR059W	YEL028W	P39989	153 aa		6.1	□□□□□ -1.43
TIF1	YKR059W	SER3	P40054	469 aa		6.1	□□□□□ -1.43
TIF1	YKR059W	CIS3	P47001	227 aa		6.1	□□□□□ -1.43
TIF1	YKR059W	RPA34	P47006	233 aa	Predicted RBP	6.1	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms