RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W LRP1P38801 184 aaKnown RBP2.19□□□□□ -2.06
PEP8YJL053W JEM1P40358 645 aa2.19□□□□□ -2.06
PEP8YJL053W PAC11P40960 533 aa2.19□□□□□ -2.06
PEP8YJL053W MDE1P47095 244 aa2.19□□□□□ -2.06
PEP8YJL053W RRP46P53256 223 aaPredicted RBP2.19□□□□□ -2.06
PEP8YJL053W YDR541CQ03049 344 aa2.19□□□□□ -2.06
PEP8YJL053W YDR341CQ05506 607 aaKnown RBP2.19□□□□□ -2.06
PEP8YJL053W MRPL35Q06678 367 aa2.19□□□□□ -2.06
PEP8YJL053W NSE1Q07913 336 aa2.19□□□□□ -2.06
PEP8YJL053W UAF30Q08747 228 aa2.19□□□□□ -2.06
PEP8YJL053W RRG7Q08774 242 aaPredicted RBP2.19□□□□□ -2.06
PEP8YJL053W TMS1Q12116 473 aa2.19□□□□□ -2.06
PEP8YJL053W RPN5Q12250 445 aaKnown RBP2.19□□□□□ -2.06
PEP8YJL053W YRM1Q12340 786 aa2.19□□□□□ -2.06
PEP8YJL053W NCA2Q12374 616 aa2.19□□□□□ -2.06
PEP8YJL053W ATP1P07251 545 aaKnown RBP2.18□□□□□ -2.06
PEP8YJL053W ALG1P16661 449 aa2.18□□□□□ -2.06
PEP8YJL053W MNE1P24720 663 aa2.18□□□□□ -2.06
PEP8YJL053W KAR9P32526 644 aa2.18□□□□□ -2.06
PEP8YJL053W NRP1P32770 719 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
PEP8YJL053W GDT1P38301 280 aaPredicted RBP2.18□□□□□ -2.06
PEP8YJL053W MAM33P40513 266 aa2.18□□□□□ -2.06
PEP8YJL053W TOS3P43637 560 aa2.18□□□□□ -2.06
PEP8YJL053W MTM1P53320 366 aa2.18□□□□□ -2.06
PEP8YJL053W NUP116Q02630 1113 aa2.18□□□□□ -2.06
PEP8YJL053W CCE1Q03702 353 aa2.18□□□□□ -2.06
PEP8YJL053W RCF1Q03713 159 aa2.18□□□□□ -2.06
PEP8YJL053W PRM6Q04705 352 aa2.18□□□□□ -2.06
PEP8YJL053W LOT6Q07923 191 aa2.18□□□□□ -2.06
PEP8YJL053W PAR32Q12515 295 aaKnown RBP2.18□□□□□ -2.06
PEP8YJL053W HTZ1Q12692 134 aaKnown RBP2.18□□□□□ -2.06
PEP8YJL053W CYC3P06182 269 aa2.17□□□□□ -2.06
PEP8YJL053W NFT1P0CE68 1218 aa2.17□□□□□ -2.06
PEP8YJL053W CLN3P13365 580 aa2.17□□□□□ -2.06
PEP8YJL053W ISY1P21374 235 aaPredicted RBP2.17□□□□□ -2.06
PEP8YJL053W SKN1P33336 771 aa2.17□□□□□ -2.06
PEP8YJL053W SKT5P34226 696 aa2.17□□□□□ -2.06
PEP8YJL053W SEC28P40509 296 aaKnown RBP2.17□□□□□ -2.06
PEP8YJL053W ROG1P53118 685 aa2.17□□□□□ -2.06
PEP8YJL053W PRP3Q03338 469 aaPredicted RBP2.17□□□□□ -2.06
PEP8YJL053W YMR027WQ04371 470 aa2.17□□□□□ -2.06
PEP8YJL053W SNT309Q06091 175 aaPredicted RBP2.17□□□□□ -2.06
PEP8YJL053W NDL1Q06568 189 aa2.17□□□□□ -2.06
PEP8YJL053W MDM36Q06820 579 aa2.17□□□□□ -2.06
PEP8YJL053W HRT3Q12347 344 aa2.17□□□□□ -2.06
PEP8YJL053W JID1Q12350 301 aa2.17□□□□□ -2.06
PEP8YJL053W EAF3Q12432 401 aa2.17□□□□□ -2.06
PEP8YJL053W POM152P39685 1337 aa2.17□□□□□ -2.06
PEP8YJL053W HSP82P02829 709 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W RPL6BP05739 176 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W PIS1P06197 220 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W RPS8AP0CX39 200 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W RPS8BP0CX40 200 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W NAT1P12945 854 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W YEF1P32622 495 aa2.16□□□□□ -2.06
PEP8YJL053W DOA1P36037 715 aa2.16□□□□□ -2.06
PEP8YJL053W KAP104P38217 918 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W QDR3P38227 689 aa2.16□□□□□ -2.06
PEP8YJL053W GPI16P38875 610 aa2.16□□□□□ -2.06
PEP8YJL053W ATM1P40416 690 aa2.16□□□□□ -2.06
PEP8YJL053W MRM2P53123 320 aa2.16□□□□□ -2.06
PEP8YJL053W YGL039WP53183 348 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W YGR117CP53270 476 aa2.16□□□□□ -2.06
PEP8YJL053W RPL6AQ02326 176 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W ADA2Q02336 434 aa2.16□□□□□ -2.06
PEP8YJL053W ERO1Q03103 563 aa2.16□□□□□ -2.06
PEP8YJL053W SMC5Q08204 1093 aa2.16□□□□□ -2.06
PEP8YJL053W AAD15Q08361 143 aa2.16□□□□□ -2.06
PEP8YJL053W FDH1Q08911 376 aa2.16□□□□□ -2.06
PEP8YJL053W WTM1Q12363 437 aaKnown RBP2.16□□□□□ -2.06
PEP8YJL053W SRN2Q99176 213 aa2.16□□□□□ -2.06
PEP8YJL053W PAB1P04147 577 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
PEP8YJL053W TPK3P05986 398 aa2.15□□□□□ -2.07
PEP8YJL053W RPL1AP0CX43 217 aaKnown RBP2.15□□□□□ -2.07
PEP8YJL053W RPL1BP0CX44 217 aaKnown RBP2.15□□□□□ -2.07
PEP8YJL053W ARF1P11076 181 aaKnown RBP2.15□□□□□ -2.07
PEP8YJL053W CAP2P13517 287 aa2.15□□□□□ -2.07
PEP8YJL053W EXG1P23776 448 aaKnown RBP2.15□□□□□ -2.07
PEP8YJL053W PRR1P28708 518 aa2.15□□□□□ -2.07
PEP8YJL053W PUP2P32379 260 aa2.15□□□□□ -2.07
PEP8YJL053W RAD5P32849 1169 aaPredicted RBP2.15□□□□□ -2.07
PEP8YJL053W SWD3P38123 315 aa2.15□□□□□ -2.07
PEP8YJL053W SBE22P38814 852 aa2.15□□□□□ -2.07
PEP8YJL053W YHR131CP38835 850 aa2.15□□□□□ -2.07
PEP8YJL053W WSS1P38838 269 aa2.15□□□□□ -2.07
PEP8YJL053W EFM4P40516 257 aa2.15□□□□□ -2.07
PEP8YJL053W HAC1P41546 238 aa2.15□□□□□ -2.07
PEP8YJL053W YFR057WP43625 151 aa2.15□□□□□ -2.07
PEP8YJL053W ASN2P49090 572 aaKnown RBP2.15□□□□□ -2.07
PEP8YJL053W SHY1P53266 389 aa2.15□□□□□ -2.07
PEP8YJL053W TRM112P53738 135 aaPredicted RBP2.15□□□□□ -2.07
PEP8YJL053W SPR6Q01684 191 aa2.15□□□□□ -2.07
PEP8YJL053W YMR102CQ03177 834 aa2.15□□□□□ -2.07
PEP8YJL053W RTN1Q04947 295 aaKnown RBP2.15□□□□□ -2.07
PEP8YJL053W RIF2Q06208 395 aa2.15□□□□□ -2.07
PEP8YJL053W CMS1Q07897 291 aaKnown RBP2.15□□□□□ -2.07
PEP8YJL053W YGK3Q12222 375 aaPredicted RBP2.15□□□□□ -2.07
PEP8YJL053W RBD2Q12270 262 aa2.15□□□□□ -2.07
PEP8YJL053W ADH2P00331 348 aaKnown RBP2.14□□□□□ -2.07
PEP8YJL053W MSI1P13712 422 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms