RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W PLB2Q03674 706 aa5.08□□□□□ -1.6
SPC97YHR172W BUR2Q05949 395 aa5.08□□□□□ -1.6
SPC97YHR172W YOR365CQ08844 703 aa5.08□□□□□ -1.6
SPC97YHR172W RRI1Q12468 440 aa5.08□□□□□ -1.6
SPC97YHR172W LSO2Q3E772 92 aaKnown RBP5.08□□□□□ -1.6
SPC97YHR172W ATP1P07251 545 aaKnown RBP5.08□□□□□ -1.6
SPC97YHR172W APL1P27351 700 aa5.08□□□□□ -1.6
SPC97YHR172W MRPL7P36519 292 aa5.08□□□□□ -1.6
SPC97YHR172W COX16P47081 118 aa5.08□□□□□ -1.6
SPC97YHR172W CWC23P52868 283 aaPredicted RBP5.08□□□□□ -1.6
SPC97YHR172W UBP16Q02863 499 aa5.08□□□□□ -1.6
SPC97YHR172W RIM13Q03792 727 aa5.08□□□□□ -1.6
SPC97YHR172W HTB1P02293 131 aaKnown RBP5.07□□□□□ -1.6
SPC97YHR172W HTB2P02294 131 aa5.07□□□□□ -1.6
SPC97YHR172W SCEIP03882 235 aa5.07□□□□□ -1.6
SPC97YHR172W SRP54P20424 541 aaKnown RBP5.07□□□□□ -1.6
SPC97YHR172W SPT10P35208 640 aa5.07□□□□□ -1.6
SPC97YHR172W LNP1P38878 278 aa5.07□□□□□ -1.6
SPC97YHR172W RPH1P39956 796 aa5.07□□□□□ -1.6
SPC97YHR172W AGP3P43548 558 aa5.07□□□□□ -1.6
SPC97YHR172W RPN11P43588 306 aaKnown RBP5.07□□□□□ -1.6
SPC97YHR172W YGL117WP53133 265 aa5.07□□□□□ -1.6
SPC97YHR172W YGR042WP53227 271 aa5.07□□□□□ -1.6
SPC97YHR172W GCN5Q03330 439 aa5.07□□□□□ -1.6
SPC97YHR172W SIZ1Q04195 904 aa5.07□□□□□ -1.6
SPC97YHR172W COQ11Q05892 277 aa5.07□□□□□ -1.6
SPC97YHR172W MRI1Q06489 411 aaKnown RBP5.07□□□□□ -1.6
SPC97YHR172W ATG9Q12142 997 aa5.07□□□□□ -1.6
SPC97YHR172W AIM45Q12480 344 aaKnown RBP5.07□□□□□ -1.6
SPC97YHR172W PUT3P25502 979 aaPredicted RBP5.07□□□□□ -1.6
SPC97YHR172W YOX1P34161 385 aa5.07□□□□□ -1.6
SPC97YHR172W TAF14P35189 244 aa5.07□□□□□ -1.6
SPC97YHR172W GMH1P36125 273 aa5.07□□□□□ -1.6
SPC97YHR172W HIS2P38635 335 aa5.07□□□□□ -1.6
SPC97YHR172W YER121WP40076 114 aa5.07□□□□□ -1.6
SPC97YHR172W DSE1P40077 573 aa5.07□□□□□ -1.6
SPC97YHR172W FHN1P53279 174 aa5.07□□□□□ -1.6
SPC97YHR172W MDM30Q05930 598 aa5.07□□□□□ -1.6
SPC97YHR172W YPR147CQ06522 304 aaKnown RBP5.07□□□□□ -1.6
SPC97YHR172W QCR7P00128 127 aa5.06□□□□□ -1.6
SPC97YHR172W YBR121C-AP0C5L4 52 aa5.06□□□□□ -1.6
SPC97YHR172W RPS4AP0CX35 261 aaKnown RBP5.06□□□□□ -1.6
SPC97YHR172W RPS4BP0CX36 261 aaKnown RBP5.06□□□□□ -1.6
SPC97YHR172W MAS2P11914 482 aa5.06□□□□□ -1.6
SPC97YHR172W SGV1P23293 657 aaKnown RBP5.06□□□□□ -1.6
SPC97YHR172W GAC1P28006 793 aa5.06□□□□□ -1.6
SPC97YHR172W PDR3P33200 976 aa5.06□□□□□ -1.6
SPC97YHR172W CAF4P36130 643 aa5.06□□□□□ -1.6
SPC97YHR172W RFT1P38206 574 aaPredicted RBP5.06□□□□□ -1.6
SPC97YHR172W CCT2P39076 527 aaKnown RBP5.06□□□□□ -1.6
SPC97YHR172W PCF11P39081 626 aaPredicted RBP5.06□□□□□ -1.6
SPC97YHR172W CIN4P39110 191 aa5.06□□□□□ -1.6
SPC97YHR172W VAB2P40003 282 aa5.06□□□□□ -1.6
SPC97YHR172W GAT2P40209 560 aa5.06□□□□□ -1.6
SPC97YHR172W POG1P40473 351 aa5.06□□□□□ -1.6
SPC97YHR172W RPC17P47076 161 aa5.06□□□□□ -1.6
SPC97YHR172W MSY1P48527 492 aa5.06□□□□□ -1.6
SPC97YHR172W YIP3P53633 176 aa5.06□□□□□ -1.6
SPC97YHR172W YDC1Q02896 317 aa5.06□□□□□ -1.6
SPC97YHR172W AAD15Q08361 143 aa5.06□□□□□ -1.6
SPC97YHR172W RIB2Q12362 591 aaKnown RBP5.06□□□□□ -1.6
SPC97YHR172W YKL183C-AQ3E765 70 aa5.06□□□□□ -1.6
SPC97YHR172W YCL012CQ8J0M4 134 aa5.06□□□□□ -1.6
SPC97YHR172W SNA3P14359 133 aa5.06□□□□□ -1.6
SPC97YHR172W RPO26P20435 155 aa5.06□□□□□ -1.6
SPC97YHR172W GBP2P25555 427 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SPC97YHR172W MSK1P32048 576 aa5.06□□□□□ -1.6
SPC97YHR172W SOF1P33750 489 aaKnown RBP5.06□□□□□ -1.6
SPC97YHR172W RRN10P38204 145 aa5.06□□□□□ -1.6
SPC97YHR172W BMT2P38278 337 aa5.06□□□□□ -1.6
SPC97YHR172W FZO1P38297 855 aa5.06□□□□□ -1.6
SPC97YHR172W UBA4P38820 440 aa5.06□□□□□ -1.6
SPC97YHR172W FMO1P38866 432 aa5.06□□□□□ -1.6
SPC97YHR172W YNL194CP40169 301 aa5.06□□□□□ -1.6
SPC97YHR172W OPT1P40897 799 aa5.06□□□□□ -1.6
SPC97YHR172W CIN5P40917 295 aa5.06□□□□□ -1.6
SPC97YHR172W SNX4P47057 423 aa5.06□□□□□ -1.6
SPC97YHR172W SLG1P54867 378 aa5.06□□□□□ -1.6
SPC97YHR172W SIA1Q12212 622 aa5.06□□□□□ -1.6
SPC97YHR172W RGS2Q99188 309 aa5.06□□□□□ -1.6
SPC97YHR172W GAR1P28007 205 aaKnown RBP5.05□□□□□ -1.6
SPC97YHR172W RGT1P32862 1170 aa5.05□□□□□ -1.6
SPC97YHR172W MNS1P32906 549 aa5.05□□□□□ -1.6
SPC97YHR172W OSH7P38755 437 aa5.05□□□□□ -1.6
SPC97YHR172W RTT101P47050 842 aa5.05□□□□□ -1.6
SPC97YHR172W YJR149WP47177 404 aa5.05□□□□□ -1.6
SPC97YHR172W IRC4Q03036 179 aa5.05□□□□□ -1.6
SPC97YHR172W UBX2Q04228 584 aa5.05□□□□□ -1.6
SPC97YHR172W TEN1Q07921 160 aa5.05□□□□□ -1.6
SPC97YHR172W CSM4Q08955 156 aa5.05□□□□□ -1.6
SPC97YHR172W PER33Q12144 273 aa5.05□□□□□ -1.6
SPC97YHR172W ACH1P32316 526 aa5.05□□□□□ -1.6
SPC97YHR172W HES1P35843 434 aa5.05□□□□□ -1.6
SPC97YHR172W ACO2P39533 789 aa5.05□□□□□ -1.6
SPC97YHR172W ECM10P39987 644 aa5.05□□□□□ -1.6
SPC97YHR172W YMR134WP40207 237 aa5.05□□□□□ -1.6
SPC97YHR172W YKE4P40544 346 aa5.05□□□□□ -1.6
SPC97YHR172W SPT20P50875 604 aa5.05□□□□□ -1.6
SPC97YHR172W HST3P53687 447 aa5.05□□□□□ -1.6
SPC97YHR172W ALG11P53954 548 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 113.4 ms