RNA–Protein interactions for RNA: YGR278W

CWC22, Transcript of Spliceosome-associated protein that is required for pre-mRNA splicing, yeast

Gene CWC22, Length 1,734 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWC22	YGR278W	NDJ1	Q12366	352 aa		2.66	□□□□□ -1.98
CWC22	YGR278W	YNL162W-A	Q3E7A8	72 aa		2.66	□□□□□ -1.98
CWC22	YGR278W	RAD9	P14737	1309 aa		2.66	□□□□□ -1.98
CWC22	YGR278W	ILV5	P06168	395 aa	Known RBP	2.65	□□□□□ -1.98
CWC22	YGR278W	RAD7	P06779	565 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	COR1	P07256	457 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	DSF1	P0CX08	502 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	YNR073C	P0CX09	502 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	NDI1	P32340	513 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	VPS51	P36116	164 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	PFF1	P38244	976 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	RTT107	P38850	1070 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	MLH1	P38920	769 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	RCY1	P39531	840 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	PHO90	P39535	881 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	CFD1	P40558	293 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	DSN1	P40568	576 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	SNX4	P47057	423 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	TMA22	P47089	198 aa	Predicted RBP	2.65	□□□□□ -1.98
CWC22	YGR278W	ECM27	P47144	725 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	UBP8	P50102	471 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	YGL114W	P53134	725 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	LIF1	P53150	421 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	YGR127W	P53275	312 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	SOL4	P53315	255 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	SSU72	P53538	206 aa	Predicted RBP	2.65	□□□□□ -1.98
CWC22	YGR278W	SMM1	P53720	384 aa	Known RBP	2.65	□□□□□ -1.98
CWC22	YGR278W	CUS2	P53830	285 aa	Predicted RBP	2.65	□□□□□ -1.98
CWC22	YGR278W	SLG1	P54867	378 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	VPS60	Q03390	229 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	FIN1	Q03898	291 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	SMA2	Q04658	369 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	DIC1	Q06143	298 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	CTS2	Q06350	511 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	SIL1	Q08199	421 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	TIP41	Q12199	356 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	TAD3	Q9URQ3	322 aa		2.65	□□□□□ -1.98
CWC22	YGR278W	IRC20	Q06554	1556 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	HIP1	P06775	603 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	RPL31B	P0C2H9	113 aa	Known RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	MEK1	P24719	497 aa	Predicted RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	RAD14	P28519	371 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	YIM1	P28625	365 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	SPR1	P32603	445 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	YKL071W	P36086	256 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	YBR139W	P38109	508 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	ROT2	P38138	954 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	END3	P39013	349 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	CIN4	P39110	191 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	YER130C	P39959	443 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	THO1	P40040	218 aa	Known RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	SER3	P40054	469 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	VRG4	P40107	337 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	SNG1	P46950	547 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	IBA57	P47158	497 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	PXR1	P53335	271 aa	Predicted RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	RPT4	P53549	437 aa	Known RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	DUG3	P53871	357 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	VAC7	P53950	1165 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	DIA1	P54005	336 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	ERG13	P54839	491 aa	Known RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	YVH1	Q02256	364 aa	Known RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	UTP6	Q02354	440 aa	Known RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	ENT5	Q03769	411 aa	Known RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	COQ11	Q05892	277 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	STE23	Q06010	1027 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	YFH1	Q07540	174 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	YEH2	Q07950	538 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	REX4	Q08237	289 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	BSC6	Q08280	497 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	DNL4	Q08387	944 aa	Predicted RBP	2.65	□□□□□ -1.99
CWC22	YGR278W	NRT1	Q08485	598 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	YOR365C	Q08844	703 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	SFG1	Q12507	346 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	NCB2	Q92317	146 aa		2.65	□□□□□ -1.99
CWC22	YGR278W	DNF1	P32660	1571 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	RPL24A	P04449	155 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	GPH1	P06738	902 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	MSF1	P08425	469 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	RPL35A	P0CX84	120 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	RPL35B	P0CX85	120 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	SCH9	P11792	824 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	GAL3	P13045	520 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	RPB8	P20436	146 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	AIM17	P23180	465 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	MEI4	P29467	408 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	ATP7	P30902	174 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	RML2	P32611	393 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	YME2	P32843	850 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	PDR3	P33200	976 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	MSN2	P33748	704 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	RRP1	P35178	278 aa	Predicted RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	TCM62	P38228	572 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	SWC5	P38326	303 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	VMA22	P38784	181 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	MBB1	P39534	108 aa		2.64	□□□□□ -1.99
CWC22	YGR278W	SEC72	P39742	193 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	RFC4	P40339	323 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	ERG10	P41338	398 aa	Known RBP	2.64	□□□□□ -1.99
CWC22	YGR278W	ATG27	P46989	271 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms