RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W LAS1P36146 502 aaPredicted RBP2.17□□□□□ -2.06
NIC96YFR002W NAT2P37293 288 aa2.17□□□□□ -2.06
NIC96YFR002W TOF1P53840 1238 aa2.17□□□□□ -2.06
NIC96YFR002W MHR1Q06630 226 aa2.17□□□□□ -2.06
NIC96YFR002W RPN5Q12250 445 aaKnown RBP2.17□□□□□ -2.06
NIC96YFR002W HRT3Q12347 344 aa2.17□□□□□ -2.06
NIC96YFR002W RPO41P13433 1351 aaKnown RBP2.17□□□□□ -2.06
NIC96YFR002W SMY1P32364 656 aaKnown RBP2.17□□□□□ -2.06
NIC96YFR002W HXT1P32465 570 aa2.17□□□□□ -2.06
NIC96YFR002W HXT3P32466 567 aaKnown RBP2.17□□□□□ -2.06
NIC96YFR002W SPR1P32603 445 aa2.17□□□□□ -2.06
NIC96YFR002W RSM22P36056 628 aa2.17□□□□□ -2.06
NIC96YFR002W UIP5P36137 443 aa2.17□□□□□ -2.06
NIC96YFR002W ISC1P40015 477 aaKnown RBP2.17□□□□□ -2.06
NIC96YFR002W POP1P41812 875 aa2.17□□□□□ -2.06
NIC96YFR002W YFL067WP43537 175 aa2.17□□□□□ -2.06
NIC96YFR002W CAK1P43568 368 aaPredicted RBP2.17□□□□□ -2.06
NIC96YFR002W FYV8P46949 817 aaKnown RBP2.17□□□□□ -2.06
NIC96YFR002W SDT1P53078 280 aa2.17□□□□□ -2.06
NIC96YFR002W POP6P53218 158 aa2.17□□□□□ -2.06
NIC96YFR002W TWF1P53250 332 aa2.17□□□□□ -2.06
NIC96YFR002W NCS2P53923 493 aaPredicted RBP2.17□□□□□ -2.06
NIC96YFR002W TAP42Q04372 366 aa2.17□□□□□ -2.06
NIC96YFR002W RRG7Q08774 242 aaPredicted RBP2.17□□□□□ -2.06
NIC96YFR002W YML133CQ03099 1374 aa2.16□□□□□ -2.06
NIC96YFR002W ADH5P38113 351 aaKnown RBP2.16□□□□□ -2.06
NIC96YFR002W OTU2P38747 307 aaKnown RBP2.16□□□□□ -2.06
NIC96YFR002W MTC6P38849 526 aa2.16□□□□□ -2.06
NIC96YFR002W URB2P47108 1174 aa2.16□□□□□ -2.06
NIC96YFR002W KTR5P53966 522 aaPredicted RBP2.16□□□□□ -2.06
NIC96YFR002W ODC1Q03028 310 aa2.16□□□□□ -2.06
NIC96YFR002W PDS5Q04264 1277 aa2.16□□□□□ -2.06
NIC96YFR002W PAL1Q05518 499 aaKnown RBP2.16□□□□□ -2.06
NIC96YFR002W TOR1P35169 2470 aa2.16□□□□□ -2.06
NIC96YFR002W YCR100CP25606 316 aa2.16□□□□□ -2.06
NIC96YFR002W ARO2P28777 376 aaKnown RBP2.16□□□□□ -2.06
NIC96YFR002W CRM1P30822 1084 aaKnown RBP2.16□□□□□ -2.06
NIC96YFR002W DLD2P46681 530 aaKnown RBP2.16□□□□□ -2.06
NIC96YFR002W TIS11P47977 285 aa2.16□□□□□ -2.06
NIC96YFR002W OCA1P50946 238 aaPredicted RBP2.16□□□□□ -2.06
NIC96YFR002W YGL108CP53139 140 aa2.16□□□□□ -2.06
NIC96YFR002W YDR239CQ03780 787 aa2.16□□□□□ -2.06
NIC96YFR002W TSR1Q07381 788 aaKnown RBP2.16□□□□□ -2.06
NIC96YFR002W PSY3Q12318 242 aa2.16□□□□□ -2.06
NIC96YFR002W NUM1Q00402 2748 aa2.15□□□□□ -2.06
NIC96YFR002W ADH2P00331 348 aaKnown RBP2.15□□□□□ -2.07
NIC96YFR002W STF1P01098 86 aa2.15□□□□□ -2.07
NIC96YFR002W LEU4P06208 619 aaKnown RBP2.15□□□□□ -2.07
NIC96YFR002W RPL3P14126 387 aaKnown RBP2.15□□□□□ -2.07
NIC96YFR002W DAP2P18962 818 aa2.15□□□□□ -2.07
NIC96YFR002W ICL1P28240 557 aaPredicted RBP2.15□□□□□ -2.07
NIC96YFR002W SMI1P32566 505 aa2.15□□□□□ -2.07
NIC96YFR002W GYP6P32806 458 aa2.15□□□□□ -2.07
NIC96YFR002W MIX23P38162 196 aa2.15□□□□□ -2.07
NIC96YFR002W HXT14P42833 540 aa2.15□□□□□ -2.07
NIC96YFR002W FMS1P50264 508 aa2.15□□□□□ -2.07
NIC96YFR002W YNR068CP53754 272 aa2.15□□□□□ -2.07
NIC96YFR002W GOR1P53839 350 aa2.15□□□□□ -2.07
NIC96YFR002W IBD2P53892 351 aa2.15□□□□□ -2.07
NIC96YFR002W KAP120Q02932 1032 aa2.15□□□□□ -2.07
NIC96YFR002W PML1Q07930 204 aaPredicted RBP2.15□□□□□ -2.07
NIC96YFR002W SEC39Q12745 709 aa2.15□□□□□ -2.07
NIC96YFR002W PMD1P32634 1753 aa2.15□□□□□ -2.07
NIC96YFR002W SUP35P05453 685 aaKnown RBP2.15□□□□□ -2.07
NIC96YFR002W RPL1AP0CX43 217 aaKnown RBP2.15□□□□□ -2.07
NIC96YFR002W RPL1BP0CX44 217 aaKnown RBP2.15□□□□□ -2.07
NIC96YFR002W REC107P21651 314 aa2.15□□□□□ -2.07
NIC96YFR002W RML2P32611 393 aa2.15□□□□□ -2.07
NIC96YFR002W TFB1P32776 642 aa2.15□□□□□ -2.07
NIC96YFR002W YSW1P38280 609 aa2.15□□□□□ -2.07
NIC96YFR002W YHR054CP38780 354 aa2.15□□□□□ -2.07
NIC96YFR002W SER3P40054 469 aa2.15□□□□□ -2.07
NIC96YFR002W EOS1P53938 366 aa2.15□□□□□ -2.07
NIC96YFR002W YLR152CP54072 576 aa2.15□□□□□ -2.07
NIC96YFR002W PRO2P54885 456 aaKnown RBP2.15□□□□□ -2.07
NIC96YFR002W UAF30Q08747 228 aa2.15□□□□□ -2.07
NIC96YFR002W MSP1P28737 362 aa2.14□□□□□ -2.07
NIC96YFR002W LTV1P34078 463 aa2.14□□□□□ -2.07
NIC96YFR002W YGR111WP53265 400 aa2.14□□□□□ -2.07
NIC96YFR002W PNG1Q02890 363 aa2.14□□□□□ -2.07
NIC96YFR002W GRX3Q03835 250 aa2.14□□□□□ -2.07
NIC96YFR002W YLR456WQ06199 204 aa2.14□□□□□ -2.07
NIC96YFR002W YLR108CQ12259 485 aa2.14□□□□□ -2.07
NIC96YFR002W RBD2Q12270 262 aa2.14□□□□□ -2.07
NIC96YFR002W RRP36Q12481 300 aaPredicted RBP2.14□□□□□ -2.07
NIC96YFR002W SAM1P10659 382 aaKnown RBP2.14□□□□□ -2.07
NIC96YFR002W SAM2P19358 384 aaKnown RBP2.14□□□□□ -2.07
NIC96YFR002W IDH2P28241 369 aaKnown RBP2.14□□□□□ -2.07
NIC96YFR002W YME2P32843 850 aa2.14□□□□□ -2.07
NIC96YFR002W DAD2P36162 133 aa2.14□□□□□ -2.07
NIC96YFR002W SLM4P38247 162 aa2.14□□□□□ -2.07
NIC96YFR002W OST1P41543 476 aaKnown RBP2.14□□□□□ -2.07
NIC96YFR002W DON1Q05610 365 aa2.14□□□□□ -2.07
NIC96YFR002W DBP9Q06218 594 aaKnown RBP2.14□□□□□ -2.07
NIC96YFR002W YPL199CQ08954 240 aa2.14□□□□□ -2.07
NIC96YFR002W SOD1P00445 154 aaKnown RBP2.13□□□□□ -2.07
NIC96YFR002W YAR066WP0CX18 203 aa2.13□□□□□ -2.07
NIC96YFR002W YHR214WP0CX19 203 aa2.13□□□□□ -2.07
NIC96YFR002W ATP10P18496 279 aa2.13□□□□□ -2.07
NIC96YFR002W PPH22P23595 377 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms