RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP5	YER144C	CHO1	P08456	276 aa		3.18	□□□□□ -1.9
UBP5	YER144C	MET16	P18408	261 aa	Predicted RBP	3.18	□□□□□ -1.9
UBP5	YER144C	PMA2	P19657	947 aa		3.18	□□□□□ -1.9
UBP5	YER144C	PDE1	P22434	369 aa		3.18	□□□□□ -1.9
UBP5	YER144C	SGV1	P23293	657 aa	Known RBP	3.18	□□□□□ -1.9
UBP5	YER144C	MVD1	P32377	396 aa	Known RBP	3.18	□□□□□ -1.9
UBP5	YER144C	ASF2	P32448	525 aa	Predicted RBP	3.18	□□□□□ -1.9
UBP5	YER144C	DUG2	P38149	878 aa		3.18	□□□□□ -1.9
UBP5	YER144C	SEC31	P38968	1273 aa	Known RBP	3.18	□□□□□ -1.9
UBP5	YER144C	ELO1	P39540	310 aa		3.18	□□□□□ -1.9
UBP5	YER144C	SCC4	P40090	624 aa		3.18	□□□□□ -1.9
UBP5	YER144C	PIG2	P40187	538 aa		3.18	□□□□□ -1.9
UBP5	YER144C	ATF1	P40353	525 aa		3.18	□□□□□ -1.9
UBP5	YER144C	YJL070C	P40361	888 aa		3.18	□□□□□ -1.9
UBP5	YER144C	SNG1	P46950	547 aa		3.18	□□□□□ -1.9
UBP5	YER144C	YGR067C	P53243	804 aa		3.18	□□□□□ -1.9
UBP5	YER144C	RHO5	P53879	331 aa	Known RBP	3.18	□□□□□ -1.9
UBP5	YER144C	SLT2	Q00772	484 aa		3.18	□□□□□ -1.9
UBP5	YER144C	TOF2	Q02208	771 aa		3.18	□□□□□ -1.9
UBP5	YER144C	SHR3	Q02774	210 aa		3.18	□□□□□ -1.9
UBP5	YER144C	STE23	Q06010	1027 aa		3.18	□□□□□ -1.9
UBP5	YER144C	YLR456W	Q06199	204 aa		3.18	□□□□□ -1.9
UBP5	YER144C	YLR012C	Q07927	99 aa		3.18	□□□□□ -1.9
UBP5	YER144C	ENB1	Q08299	606 aa		3.18	□□□□□ -1.9
UBP5	YER144C	YPQ1	Q12010	308 aa		3.18	□□□□□ -1.9
UBP5	YER144C	YRM1	Q12340	786 aa		3.18	□□□□□ -1.9
UBP5	YER144C	MED4	Q12343	284 aa		3.18	□□□□□ -1.9
UBP5	YER144C	YER175W-A	Q8TGU4	54 aa		3.18	□□□□□ -1.9
UBP5	YER144C	SEY1	Q99287	776 aa		3.18	□□□□□ -1.9
UBP5	YER144C	HIS1	P00498	297 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	ARG81	P05085	880 aa		3.17	□□□□□ -1.9
UBP5	YER144C	SEC63	P14906	663 aa		3.17	□□□□□ -1.9
UBP5	YER144C	HEM15	P16622	393 aa		3.17	□□□□□ -1.9
UBP5	YER144C	NIP1	P32497	812 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	GDA1	P32621	518 aa		3.17	□□□□□ -1.9
UBP5	YER144C	SGE1	P33335	543 aa		3.17	□□□□□ -1.9
UBP5	YER144C	HCS1	P34243	683 aa		3.17	□□□□□ -1.9
UBP5	YER144C	YDR089W	P38966	869 aa		3.17	□□□□□ -1.9
UBP5	YER144C	ECM10	P39987	644 aa		3.17	□□□□□ -1.9
UBP5	YER144C	YEL028W	P39989	153 aa		3.17	□□□□□ -1.9
UBP5	YER144C	UFE1	P41834	346 aa		3.17	□□□□□ -1.9
UBP5	YER144C	ELP2	P42935	788 aa		3.17	□□□□□ -1.9
UBP5	YER144C	YFR020W	P43600	232 aa		3.17	□□□□□ -1.9
UBP5	YER144C	URB2	P47108	1174 aa		3.17	□□□□□ -1.9
UBP5	YER144C	AMA1	P50082	593 aa		3.17	□□□□□ -1.9
UBP5	YER144C	YIP4	P53093	235 aa		3.17	□□□□□ -1.9
UBP5	YER144C	OGG1	P53397	376 aa	Predicted RBP	3.17	□□□□□ -1.9
UBP5	YER144C	ASI1	P54074	624 aa		3.17	□□□□□ -1.9
UBP5	YER144C	ENT5	Q03769	411 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	YMR027W	Q04371	470 aa		3.17	□□□□□ -1.9
UBP5	YER144C	RTN1	Q04947	295 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	ADE13	Q05911	482 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	MDM30	Q05930	598 aa		3.17	□□□□□ -1.9
UBP5	YER144C	YKL068W-A	Q3E826	78 aa		3.17	□□□□□ -1.9
UBP5	YER144C	AAC1	P04710	309 aa		3.17	□□□□□ -1.9
UBP5	YER144C	PDA1	P16387	420 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	YAP1	P19880	650 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	PPH22	P23595	377 aa		3.17	□□□□□ -1.9
UBP5	YER144C	PEX34	P25584	144 aa		3.17	□□□□□ -1.9
UBP5	YER144C	ADY2	P25613	283 aa		3.17	□□□□□ -1.9
UBP5	YER144C	PMI40	P29952	429 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	FAA1	P30624	700 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	KRE6	P32486	720 aa		3.17	□□□□□ -1.9
UBP5	YER144C	ECM4	P36156	370 aa		3.17	□□□□□ -1.9
UBP5	YER144C	ATP3	P38077	311 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	YBR139W	P38109	508 aa		3.17	□□□□□ -1.9
UBP5	YER144C	MIT1	P40002	666 aa		3.17	□□□□□ -1.9
UBP5	YER144C	YAT2	P40017	923 aa		3.17	□□□□□ -1.9
UBP5	YER144C	HAM1	P47119	197 aa	Known RBP	3.17	□□□□□ -1.9
UBP5	YER144C	MRPL22	P53881	309 aa		3.17	□□□□□ -1.9
UBP5	YER144C	FMP40	Q08968	688 aa	Predicted RBP	3.17	□□□□□ -1.9
UBP5	YER144C	RKI1	Q12189	258 aa		3.17	□□□□□ -1.9
UBP5	YER144C	RPL3	P14126	387 aa	Known RBP	3.16	□□□□□ -1.9
UBP5	YER144C	CBF1	P17106	351 aa		3.16	□□□□□ -1.9
UBP5	YER144C	YJU2	P28320	278 aa	Predicted RBP	3.16	□□□□□ -1.9
UBP5	YER144C	GSH1	P32477	678 aa		3.16	□□□□□ -1.9
UBP5	YER144C	RPC34	P32910	317 aa		3.16	□□□□□ -1.9
UBP5	YER144C	YBR144C	P34215	104 aa		3.16	□□□□□ -1.9
UBP5	YER144C	TUL1	P36096	758 aa		3.16	□□□□□ -1.9
UBP5	YER144C	RFC3	P38629	340 aa		3.16	□□□□□ -1.9
UBP5	YER144C	SYG1	P40528	902 aa		3.16	□□□□□ -1.9
UBP5	YER144C	LOC1	P43586	204 aa	Predicted RBP	3.16	□□□□□ -1.9
UBP5	YER144C	BNA6	P43619	295 aa		3.16	□□□□□ -1.9
UBP5	YER144C	MDV1	P47025	714 aa		3.16	□□□□□ -1.9
UBP5	YER144C	TRF5	P48561	642 aa	Known RBP	3.16	□□□□□ -1.9
UBP5	YER144C	PRP24	P49960	444 aa	Known RBP	3.16	□□□□□ -1.9
UBP5	YER144C	IPI3	P53877	555 aa		3.16	□□□□□ -1.9
UBP5	YER144C	YNL143C	P53908	130 aa		3.16	□□□□□ -1.9
UBP5	YER144C	YVH1	Q02256	364 aa	Known RBP	3.16	□□□□□ -1.9
UBP5	YER144C	YDR239C	Q03780	787 aa		3.16	□□□□□ -1.9
UBP5	YER144C	MCP2	Q06567	569 aa		3.16	□□□□□ -1.9
UBP5	YER144C	RTC5	Q12108	567 aa	Known RBP	3.16	□□□□□ -1.9
UBP5	YER144C	ACF2	Q12168	779 aa		3.16	□□□□□ -1.9
UBP5	YER144C	HTZ1	Q12692	134 aa	Known RBP	3.16	□□□□□ -1.9
UBP5	YER144C	STF1	P01098	86 aa		3.15	□□□□□ -1.9
UBP5	YER144C	REV1	P12689	985 aa		3.15	□□□□□ -1.9
UBP5	YER144C	CNA1	P23287	553 aa		3.15	□□□□□ -1.9
UBP5	YER144C	BUD5	P25300	642 aa	Predicted RBP	3.15	□□□□□ -1.9
UBP5	YER144C	MGT1	P26188	188 aa		3.15	□□□□□ -1.9
UBP5	YER144C	YBR242W	P38331	238 aa		3.15	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms