RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W IGO1P53897 168 aa1.24□□□□□ -2.21
LCD1YDR499W PRP42Q03776 544 aaKnown RBP1.24□□□□□ -2.21
LCD1YDR499W TPT1Q12272 230 aaKnown RBP1.24□□□□□ -2.21
LCD1YDR499W SMC6Q12749 1114 aa1.24□□□□□ -2.21
LCD1YDR499W HOM3P10869 527 aa1.23□□□□□ -2.21
LCD1YDR499W LTV1P34078 463 aa1.23□□□□□ -2.21
LCD1YDR499W YBR056WP38081 501 aa1.23□□□□□ -2.21
LCD1YDR499W FAD1P38913 306 aa1.23□□□□□ -2.21
LCD1YDR499W STN1P38960 494 aa1.23□□□□□ -2.21
LCD1YDR499W SEO1P39709 593 aa1.23□□□□□ -2.21
LCD1YDR499W DFG10P40526 253 aa1.23□□□□□ -2.21
LCD1YDR499W BUD27P43573 796 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
LCD1YDR499W SFH5P47008 294 aa1.23□□□□□ -2.21
LCD1YDR499W YGR111WP53265 400 aa1.23□□□□□ -2.21
LCD1YDR499W RRP9Q06506 573 aaKnown RBP1.23□□□□□ -2.21
LCD1YDR499W UAF30Q08747 228 aa1.23□□□□□ -2.21
LCD1YDR499W RAX1Q08760 435 aa1.23□□□□□ -2.21
LCD1YDR499W GPM3Q12326 303 aa1.23□□□□□ -2.21
LCD1YDR499W BI3Q9ZZW7 517 aa1.23□□□□□ -2.21
LCD1YDR499W PSK1P31374 1356 aa1.23□□□□□ -2.21
LCD1YDR499W NAM2P11325 894 aa1.23□□□□□ -2.21
LCD1YDR499W PXA2P34230 853 aa1.23□□□□□ -2.21
LCD1YDR499W CHS6P40955 746 aa1.23□□□□□ -2.21
LCD1YDR499W RSC1P53236 928 aa1.23□□□□□ -2.21
LCD1YDR499W CIK1Q01649 594 aa1.23□□□□□ -2.21
LCD1YDR499W ADA2Q02336 434 aa1.23□□□□□ -2.21
LCD1YDR499W MMT1Q03218 510 aa1.23□□□□□ -2.21
LCD1YDR499W ECM11Q04110 302 aa1.23□□□□□ -2.21
LCD1YDR499W YDR341CQ05506 607 aaKnown RBP1.23□□□□□ -2.21
LCD1YDR499W LIP2Q06005 328 aa1.23□□□□□ -2.21
LCD1YDR499W YPR091CQ06833 770 aa1.23□□□□□ -2.21
LCD1YDR499W DCI1Q08558 271 aa1.23□□□□□ -2.21
LCD1YDR499W RUP1Q12242 671 aa1.23□□□□□ -2.21
LCD1YDR499W YPS3Q12303 508 aa1.23□□□□□ -2.21
LCD1YDR499W IZH2Q12442 317 aa1.23□□□□□ -2.21
LCD1YDR499W YCL068CP25593 260 aa1.22□□□□□ -2.21
LCD1YDR499W RIM1P32445 135 aaKnown RBP1.22□□□□□ -2.21
LCD1YDR499W PHA2P32452 334 aa1.22□□□□□ -2.21
LCD1YDR499W CYS4P32582 507 aaKnown RBP1.22□□□□□ -2.21
LCD1YDR499W RRP1P35178 278 aaPredicted RBP1.22□□□□□ -2.21
LCD1YDR499W CHK1P38147 527 aa1.22□□□□□ -2.21
LCD1YDR499W TIM17P39515 158 aa1.22□□□□□ -2.21
LCD1YDR499W YER079WP40052 210 aaKnown RBP1.22□□□□□ -2.21
LCD1YDR499W YER186CP40101 306 aa1.22□□□□□ -2.21
LCD1YDR499W STD1Q02794 444 aa1.22□□□□□ -2.21
LCD1YDR499W CCE1Q03702 353 aa1.22□□□□□ -2.21
LCD1YDR499W YLR456WQ06199 204 aa1.22□□□□□ -2.21
LCD1YDR499W SPE3Q12074 293 aaKnown RBP1.22□□□□□ -2.21
LCD1YDR499W SNU66Q12420 587 aaPredicted RBP1.22□□□□□ -2.21
LCD1YDR499W ERP4Q12450 207 aa1.22□□□□□ -2.21
LCD1YDR499W PRB1P09232 635 aa1.21□□□□□ -2.21
LCD1YDR499W HSP104P31539 908 aaKnown RBP1.21□□□□□ -2.21
LCD1YDR499W IES6P32617 166 aa1.21□□□□□ -2.21
LCD1YDR499W SPT10P35208 640 aa1.21□□□□□ -2.21
LCD1YDR499W OLA1P38219 394 aaKnown RBP1.21□□□□□ -2.21
LCD1YDR499W BMT2P38278 337 aa1.21□□□□□ -2.21
LCD1YDR499W STP2P38704 541 aa1.21□□□□□ -2.21
LCD1YDR499W INM1P38710 295 aa1.21□□□□□ -2.21
LCD1YDR499W LRP1P38801 184 aaKnown RBP1.21□□□□□ -2.21
LCD1YDR499W TOS3P43637 560 aa1.21□□□□□ -2.21
LCD1YDR499W MDE1P47095 244 aa1.21□□□□□ -2.21
LCD1YDR499W NUP116Q02630 1113 aa1.21□□□□□ -2.21
LCD1YDR499W GYL1Q04322 720 aa1.21□□□□□ -2.21
LCD1YDR499W PLP2Q12017 286 aa1.21□□□□□ -2.21
LCD1YDR499W NCA2Q12374 616 aa1.21□□□□□ -2.21
LCD1YDR499W CDC21P06785 304 aa1.21□□□□□ -2.22
LCD1YDR499W DST1P07273 309 aa1.21□□□□□ -2.22
LCD1YDR499W ALG1P16661 449 aa1.21□□□□□ -2.22
LCD1YDR499W MRPS9P38120 278 aa1.21□□□□□ -2.22
LCD1YDR499W SBE22P38814 852 aa1.21□□□□□ -2.22
LCD1YDR499W GPI16P38875 610 aa1.21□□□□□ -2.22
LCD1YDR499W COX14P39103 70 aa1.21□□□□□ -2.22
LCD1YDR499W ROG1P53118 685 aa1.21□□□□□ -2.22
LCD1YDR499W VPS9P54787 451 aa1.21□□□□□ -2.22
LCD1YDR499W MDM36Q06820 579 aa1.21□□□□□ -2.22
LCD1YDR499W NDE2Q07500 545 aa1.21□□□□□ -2.22
LCD1YDR499W RPN5Q12250 445 aaKnown RBP1.21□□□□□ -2.22
LCD1YDR499W CEX1Q12453 761 aa1.21□□□□□ -2.22
LCD1YDR499W PRM7Q12459 698 aa1.21□□□□□ -2.22
LCD1YDR499W ATP1P07251 545 aaKnown RBP1.2□□□□□ -2.22
LCD1YDR499W CAP2P13517 287 aa1.2□□□□□ -2.22
LCD1YDR499W EXG1P23776 448 aaKnown RBP1.2□□□□□ -2.22
LCD1YDR499W PHO91P27514 894 aa1.2□□□□□ -2.22
LCD1YDR499W ATP3P38077 311 aaKnown RBP1.2□□□□□ -2.22
LCD1YDR499W RTC2P38279 296 aa1.2□□□□□ -2.22
LCD1YDR499W YIL029CP40538 142 aa1.2□□□□□ -2.22
LCD1YDR499W LCB2P40970 561 aa1.2□□□□□ -2.22
LCD1YDR499W PIB2P53191 635 aa1.2□□□□□ -2.22
LCD1YDR499W COS1P53822 381 aa1.2□□□□□ -2.22
LCD1YDR499W MTQ1P53944 314 aa1.2□□□□□ -2.22
LCD1YDR499W MRPS16Q02608 121 aa1.2□□□□□ -2.22
LCD1YDR499W NDL1Q06568 189 aa1.2□□□□□ -2.22
LCD1YDR499W NSE1Q07913 336 aa1.2□□□□□ -2.22
LCD1YDR499W RFM1Q12192 310 aa1.2□□□□□ -2.22
LCD1YDR499W RNH203Q12338 110 aa1.2□□□□□ -2.22
LCD1YDR499W RPL1AP0CX43 217 aaKnown RBP1.2□□□□□ -2.22
LCD1YDR499W RPL1BP0CX44 217 aaKnown RBP1.2□□□□□ -2.22
LCD1YDR499W RPL12AP0CX53 165 aaKnown RBP1.2□□□□□ -2.22
LCD1YDR499W RPL12BP0CX54 165 aa1.2□□□□□ -2.22
LCD1YDR499W DPH5P32469 300 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms