RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W SNT309Q06091 175 aaPredicted RBP1.98□□□□□ -2.09
VPS52YDR484W JID1Q12350 301 aa1.98□□□□□ -2.09
VPS52YDR484W ARO3P14843 370 aaKnown RBP1.97□□□□□ -2.09
VPS52YDR484W HXT1P32465 570 aa1.97□□□□□ -2.09
VPS52YDR484W VMA8P32610 256 aaKnown RBP1.97□□□□□ -2.09
VPS52YDR484W CSE2P33308 149 aa1.97□□□□□ -2.09
VPS52YDR484W HEL1P36113 551 aa1.97□□□□□ -2.09
VPS52YDR484W MRPL10P36520 322 aa1.97□□□□□ -2.09
VPS52YDR484W SBE22P38814 852 aa1.97□□□□□ -2.09
VPS52YDR484W STN1P38960 494 aa1.97□□□□□ -2.09
VPS52YDR484W TOS3P43637 560 aa1.97□□□□□ -2.09
VPS52YDR484W MDM36Q06820 579 aa1.97□□□□□ -2.09
VPS52YDR484W LOT6Q07923 191 aa1.97□□□□□ -2.09
VPS52YDR484W NCA2Q12374 616 aa1.97□□□□□ -2.09
VPS52YDR484W CDC21P06785 304 aa1.97□□□□□ -2.09
VPS52YDR484W RPB5P20434 215 aa1.97□□□□□ -2.09
VPS52YDR484W PHA2P32452 334 aa1.97□□□□□ -2.09
VPS52YDR484W MMF1P40185 145 aaKnown RBP1.97□□□□□ -2.09
VPS52YDR484W MAM33P40513 266 aa1.97□□□□□ -2.09
VPS52YDR484W MRM2P53123 320 aa1.97□□□□□ -2.09
VPS52YDR484W VPS9P54787 451 aa1.97□□□□□ -2.09
VPS52YDR484W YDR341CQ05506 607 aaKnown RBP1.97□□□□□ -2.09
VPS52YDR484W YLR456WQ06199 204 aa1.97□□□□□ -2.09
VPS52YDR484W UAF30Q08747 228 aa1.97□□□□□ -2.09
VPS52YDR484W IZH2Q12442 317 aa1.97□□□□□ -2.09
VPS52YDR484W PDE2P06776 526 aa1.96□□□□□ -2.1
VPS52YDR484W ATP1P07251 545 aaKnown RBP1.96□□□□□ -2.1
VPS52YDR484W EXG1P23776 448 aaKnown RBP1.96□□□□□ -2.1
VPS52YDR484W PRR1P28708 518 aa1.96□□□□□ -2.1
VPS52YDR484W PRS1P32895 427 aaKnown RBP1.96□□□□□ -2.1
VPS52YDR484W INM1P38710 295 aa1.96□□□□□ -2.1
VPS52YDR484W FAD1P38913 306 aa1.96□□□□□ -2.1
VPS52YDR484W AIM10P39965 576 aaKnown RBP1.96□□□□□ -2.1
VPS52YDR484W UTP18P40362 594 aaPredicted RBP1.96□□□□□ -2.1
VPS52YDR484W SIM1P40472 476 aa1.96□□□□□ -2.1
VPS52YDR484W HAC1P41546 238 aa1.96□□□□□ -2.1
VPS52YDR484W GAB1P41733 394 aa1.96□□□□□ -2.1
VPS52YDR484W YFR057WP43625 151 aa1.96□□□□□ -2.1
VPS52YDR484W YJR085CP47131 105 aaKnown RBP1.96□□□□□ -2.1
VPS52YDR484W TIS11P47977 285 aa1.96□□□□□ -2.1
VPS52YDR484W NSE1Q07913 336 aa1.96□□□□□ -2.1
VPS52YDR484W SMC5Q08204 1093 aa1.96□□□□□ -2.1
VPS52YDR484W CUE5Q08412 411 aaKnown RBP1.96□□□□□ -2.1
VPS52YDR484W PLP2Q12017 286 aa1.96□□□□□ -2.1
VPS52YDR484W YGK3Q12222 375 aaPredicted RBP1.96□□□□□ -2.1
VPS52YDR484W GPM3Q12326 303 aa1.96□□□□□ -2.1
VPS52YDR484W CAP2P13517 287 aa1.95□□□□□ -2.1
VPS52YDR484W MSI1P13712 422 aa1.95□□□□□ -2.1
VPS52YDR484W ALG1P16661 449 aa1.95□□□□□ -2.1
VPS52YDR484W NUP2P32499 720 aa1.95□□□□□ -2.1
VPS52YDR484W COX13P32799 129 aa1.95□□□□□ -2.1
VPS52YDR484W SKN1P33336 771 aa1.95□□□□□ -2.1
VPS52YDR484W AIM24P47127 394 aa1.95□□□□□ -2.1
VPS52YDR484W YMR102CQ03177 834 aa1.95□□□□□ -2.1
VPS52YDR484W RTN1Q04947 295 aaKnown RBP1.95□□□□□ -2.1
VPS52YDR484W RIF2Q06208 395 aa1.95□□□□□ -2.1
VPS52YDR484W PIS1P06197 220 aaKnown RBP1.95□□□□□ -2.1
VPS52YDR484W SKT5P34226 696 aa1.95□□□□□ -2.1
VPS52YDR484W RRP46P53256 223 aaPredicted RBP1.95□□□□□ -2.1
VPS52YDR484W HAL1Q01766 294 aa1.95□□□□□ -2.1
VPS52YDR484W SXM1Q04175 944 aaKnown RBP1.95□□□□□ -2.1
VPS52YDR484W GYL1Q04322 720 aa1.95□□□□□ -2.1
VPS52YDR484W PRM6Q04705 352 aa1.95□□□□□ -2.1
VPS52YDR484W CMS1Q07897 291 aaKnown RBP1.95□□□□□ -2.1
VPS52YDR484W EAF3Q12432 401 aa1.95□□□□□ -2.1
VPS52YDR484W POM152P39685 1337 aa1.94□□□□□ -2.1
VPS52YDR484W YEF1P32622 495 aa1.94□□□□□ -2.1
VPS52YDR484W RTC2P38279 296 aa1.94□□□□□ -2.1
VPS52YDR484W YHR131CP38835 850 aa1.94□□□□□ -2.1
VPS52YDR484W DFG10P40526 253 aa1.94□□□□□ -2.1
VPS52YDR484W LCB3P47013 409 aa1.94□□□□□ -2.1
VPS52YDR484W BIR1P47134 954 aa1.94□□□□□ -2.1
VPS52YDR484W MST27P53176 234 aa1.94□□□□□ -2.1
VPS52YDR484W YGR117CP53270 476 aa1.94□□□□□ -2.1
VPS52YDR484W SPR6Q01684 191 aa1.94□□□□□ -2.1
VPS52YDR484W PRP3Q03338 469 aaPredicted RBP1.94□□□□□ -2.1
VPS52YDR484W BSC6Q08280 497 aa1.94□□□□□ -2.1
VPS52YDR484W SPE3Q12074 293 aaKnown RBP1.94□□□□□ -2.1
VPS52YDR484W HTZ1Q12692 134 aaKnown RBP1.94□□□□□ -2.1
VPS52YDR484W PAB1P04147 577 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
VPS52YDR484W AAT2P23542 418 aaKnown RBP1.93□□□□□ -2.1
VPS52YDR484W SLM5P25345 492 aaKnown RBP1.93□□□□□ -2.1
VPS52YDR484W PHO91P27514 894 aa1.93□□□□□ -2.1
VPS52YDR484W NRP1P32770 719 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
VPS52YDR484W MIG3P39943 394 aa1.93□□□□□ -2.1
VPS52YDR484W CHS6P40955 746 aa1.93□□□□□ -2.1
VPS52YDR484W PAC11P40960 533 aa1.93□□□□□ -2.1
VPS52YDR484W CLD1P53264 445 aa1.93□□□□□ -2.1
VPS52YDR484W YDR541CQ03049 344 aa1.93□□□□□ -2.1
VPS52YDR484W SOD1P00445 154 aaKnown RBP1.93□□□□□ -2.1
VPS52YDR484W NAT1P12945 854 aaKnown RBP1.93□□□□□ -2.1
VPS52YDR484W PCL1P24867 279 aa1.93□□□□□ -2.1
VPS52YDR484W DPH5P32469 300 aaPredicted RBP1.93□□□□□ -2.1
VPS52YDR484W RAD5P32849 1169 aaPredicted RBP1.93□□□□□ -2.1
VPS52YDR484W PEX5P35056 612 aa1.93□□□□□ -2.1
VPS52YDR484W DOA1P36037 715 aa1.93□□□□□ -2.1
VPS52YDR484W UTH1P36135 365 aa1.93□□□□□ -2.1
VPS52YDR484W STP2P38704 541 aa1.93□□□□□ -2.1
VPS52YDR484W YHK8P38776 514 aa1.93□□□□□ -2.1
VPS52YDR484W GPI16P38875 610 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms