RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W SUP35P05453 685 aaKnown RBP2.59□□□□□ -2
SHS1YDL225W CLN3P13365 580 aa2.59□□□□□ -2
SHS1YDL225W NOP1P15646 327 aaKnown RBP2.59□□□□□ -2
SHS1YDL225W PHO91P27514 894 aa2.59□□□□□ -2
SHS1YDL225W KAR9P32526 644 aa2.59□□□□□ -2
SHS1YDL225W YOX1P34161 385 aa2.59□□□□□ -2
SHS1YDL225W RRP1P35178 278 aaPredicted RBP2.59□□□□□ -2
SHS1YDL225W QDR3P38227 689 aa2.59□□□□□ -2
SHS1YDL225W SEC28P40509 296 aaKnown RBP2.59□□□□□ -2
SHS1YDL225W ERO1Q03103 563 aa2.59□□□□□ -2
SHS1YDL225W NDL1Q06568 189 aa2.59□□□□□ -2
SHS1YDL225W RRG7Q08774 242 aaPredicted RBP2.59□□□□□ -2
SHS1YDL225W EXG1P23776 448 aaKnown RBP2.58□□□□□ -2
SHS1YDL225W NRP1P32770 719 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SHS1YDL225W SWD3P38123 315 aa2.58□□□□□ -2
SHS1YDL225W SBE22P38814 852 aa2.58□□□□□ -2
SHS1YDL225W MMF1P40185 145 aaKnown RBP2.58□□□□□ -2
SHS1YDL225W MEH1Q02205 184 aa2.58□□□□□ -2
SHS1YDL225W RCF1Q03713 159 aa2.58□□□□□ -2
SHS1YDL225W ECM7Q06200 448 aa2.58□□□□□ -2
SHS1YDL225W HSP82P02829 709 aaKnown RBP2.57□□□□□ -2
SHS1YDL225W ATP1P07251 545 aaKnown RBP2.57□□□□□ -2
SHS1YDL225W CAP2P13517 287 aa2.57□□□□□ -2
SHS1YDL225W PHA2P32452 334 aa2.57□□□□□ -2
SHS1YDL225W YSC83P32792 385 aa2.57□□□□□ -2
SHS1YDL225W RXT2P38255 430 aa2.57□□□□□ -2
SHS1YDL225W YIL029CP40538 142 aa2.57□□□□□ -2
SHS1YDL225W MDE1P47095 244 aa2.57□□□□□ -2
SHS1YDL225W MLC1P53141 149 aa2.57□□□□□ -2
SHS1YDL225W PEX25Q02969 394 aa2.57□□□□□ -2
SHS1YDL225W NDE2Q07500 545 aa2.57□□□□□ -2
SHS1YDL225W RNH203Q12338 110 aa2.57□□□□□ -2
SHS1YDL225W OPI3P05375 206 aa2.57□□□□□ -2
SHS1YDL225W POP5P28005 173 aa2.57□□□□□ -2
SHS1YDL225W COX13P32799 129 aa2.57□□□□□ -2
SHS1YDL225W CSE2P33308 149 aa2.57□□□□□ -2
SHS1YDL225W MLH1P38920 769 aa2.57□□□□□ -2
SHS1YDL225W PAC11P40960 533 aa2.57□□□□□ -2
SHS1YDL225W SPR6Q01684 191 aa2.57□□□□□ -2
SHS1YDL225W YDR541CQ03049 344 aa2.57□□□□□ -2
SHS1YDL225W FDH1Q08911 376 aa2.57□□□□□ -2
SHS1YDL225W HRT3Q12347 344 aa2.57□□□□□ -2
SHS1YDL225W CEX1Q12453 761 aa2.57□□□□□ -2
SHS1YDL225W RPL12AP0CX53 165 aaKnown RBP2.56□□□□□ -2
SHS1YDL225W RPL12BP0CX54 165 aa2.56□□□□□ -2
SHS1YDL225W YEL045CP32616 141 aa2.56□□□□□ -2
SHS1YDL225W MNL1P38888 796 aa2.56□□□□□ -2
SHS1YDL225W COX14P39103 70 aa2.56□□□□□ -2
SHS1YDL225W YJR085CP47131 105 aaKnown RBP2.56□□□□□ -2
SHS1YDL225W STE24P47154 453 aa2.56□□□□□ -2
SHS1YDL225W YIP5P53108 310 aa2.56□□□□□ -2
SHS1YDL225W MRM2P53123 320 aa2.56□□□□□ -2
SHS1YDL225W MTQ1P53944 314 aa2.56□□□□□ -2
SHS1YDL225W URC2Q04411 772 aa2.56□□□□□ -2
SHS1YDL225W MDM36Q06820 579 aa2.56□□□□□ -2
SHS1YDL225W SLM5P25345 492 aaKnown RBP2.55□□□□□ -2
SHS1YDL225W PUP2P32379 260 aa2.55□□□□□ -2
SHS1YDL225W ATM1P40416 690 aa2.55□□□□□ -2
SHS1YDL225W PMT5P52867 743 aa2.55□□□□□ -2
SHS1YDL225W YGR117CP53270 476 aa2.55□□□□□ -2
SHS1YDL225W COS1P53822 381 aa2.55□□□□□ -2
SHS1YDL225W ADA2Q02336 434 aa2.55□□□□□ -2
SHS1YDL225W PAL1Q05518 499 aaKnown RBP2.55□□□□□ -2
SHS1YDL225W CUE5Q08412 411 aaKnown RBP2.55□□□□□ -2
SHS1YDL225W POM152P39685 1337 aa2.55□□□□□ -2
SHS1YDL225W SSC1P0CS90 654 aaKnown RBP2.54□□□□□ -2
SHS1YDL225W ARF1P11076 181 aaKnown RBP2.54□□□□□ -2
SHS1YDL225W NAM2P11325 894 aa2.54□□□□□ -2
SHS1YDL225W REV1P12689 985 aa2.54□□□□□ -2
SHS1YDL225W ISY1P21374 235 aaPredicted RBP2.54□□□□□ -2
SHS1YDL225W RVS161P25343 265 aaKnown RBP2.54□□□□□ -2
SHS1YDL225W YEF1P32622 495 aa2.54□□□□□ -2
SHS1YDL225W SKT5P34226 696 aa2.54□□□□□ -2
SHS1YDL225W DOA1P36037 715 aa2.54□□□□□ -2
SHS1YDL225W KAP104P38217 918 aaKnown RBP2.54□□□□□ -2
SHS1YDL225W SDS24P38314 527 aa2.54□□□□□ -2
SHS1YDL225W EPL1P43572 832 aa2.54□□□□□ -2
SHS1YDL225W ASN2P49090 572 aaKnown RBP2.54□□□□□ -2
SHS1YDL225W TOS2P50078 622 aa2.54□□□□□ -2
SHS1YDL225W RTT102P53330 157 aa2.54□□□□□ -2
SHS1YDL225W PRP3Q03338 469 aaPredicted RBP2.54□□□□□ -2
SHS1YDL225W IRC25Q07951 179 aa2.54□□□□□ -2
SHS1YDL225W YGK3Q12222 375 aaPredicted RBP2.54□□□□□ -2
SHS1YDL225W AHC1Q12433 566 aa2.54□□□□□ -2
SHS1YDL225W RPL6BP05739 176 aaKnown RBP2.53□□□□□ -2
SHS1YDL225W TPK3P05986 398 aa2.53□□□□□ -2
SHS1YDL225W LDB16P25587 256 aa2.53□□□□□ -2
SHS1YDL225W DPH2P32461 534 aa2.53□□□□□ -2
SHS1YDL225W BLI1P35727 113 aa2.53□□□□□ -2
SHS1YDL225W MRPL4P36517 319 aa2.53□□□□□ -2
SHS1YDL225W MRPL10P36520 322 aa2.53□□□□□ -2
SHS1YDL225W SPP381P38282 291 aaPredicted RBP2.53□□□□□ -2
SHS1YDL225W YHR131CP38835 850 aa2.53□□□□□ -2
SHS1YDL225W WSS1P38838 269 aa2.53□□□□□ -2
SHS1YDL225W PRE5P40302 234 aaKnown RBP2.53□□□□□ -2
SHS1YDL225W LCB3P47013 409 aa2.53□□□□□ -2
SHS1YDL225W AIM24P47127 394 aa2.53□□□□□ -2
SHS1YDL225W SDT1P53078 280 aa2.53□□□□□ -2
SHS1YDL225W RPL6AQ02326 176 aaKnown RBP2.53□□□□□ -2
SHS1YDL225W YMR102CQ03177 834 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms