RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	GPI15	P53961	229 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	ARK1	P53974	638 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	RPM2	Q02773	1202 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	YDR541C	Q03049	344 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	HCR1	Q05775	265 aa	Known RBP	1.6	□□□□□ -2.15
RLM1	YPL089C	IPK1	Q06667	281 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	SKI7	Q08491	747 aa	Predicted RBP	1.6	□□□□□ -2.15
RLM1	YPL089C	YPR022C	Q12139	1133 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	CDC21	P06785	304 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	SCH9	P11792	824 aa	Known RBP	1.59	□□□□□ -2.15
RLM1	YPL089C	TAL1	P15019	335 aa	Known RBP	1.59	□□□□□ -2.15
RLM1	YPL089C	RDS1	P25611	832 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	ITR1	P30605	584 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	NDI1	P32340	513 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	GLC7	P32598	312 aa	Known RBP	1.59	□□□□□ -2.15
RLM1	YPL089C	PTR2	P32901	601 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	LOS1	P33418	1100 aa	Predicted RBP	1.59	□□□□□ -2.15
RLM1	YPL089C	KAP104	P38217	918 aa	Known RBP	1.59	□□□□□ -2.15
RLM1	YPL089C	STP2	P38704	541 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	INM1	P38710	295 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	SHO1	P40073	367 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	GCD10	P41814	478 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	RPA34	P47006	233 aa	Predicted RBP	1.59	□□□□□ -2.15
RLM1	YPL089C	PHB2	P50085	310 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	AVT4	P50944	713 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	SHE4	P51534	789 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	YNR048W	P53740	393 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	YNR068C	P53754	272 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	IMP4	P53941	290 aa	Known RBP	1.59	□□□□□ -2.15
RLM1	YPL089C	UTP6	Q02354	440 aa	Known RBP	1.59	□□□□□ -2.15
RLM1	YPL089C	ECM7	Q06200	448 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	ATG34	Q12292	412 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	RMD5	Q12508	421 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	SRN2	Q99176	213 aa		1.59	□□□□□ -2.15
RLM1	YPL089C	TEF1	P02994	458 aa	Known RBP	1.59	□□□□□ -2.16
RLM1	YPL089C	ARG4	P04076	463 aa	Predicted RBP	1.59	□□□□□ -2.16
RLM1	YPL089C	STE3	P06783	470 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	DST1	P07273	309 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	IMA3	P0CW40	589 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	IMA4	P0CW41	589 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	PRP16	P15938	1071 aa	Predicted RBP	1.59	□□□□□ -2.16
RLM1	YPL089C	SPO12	P17123	173 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	LSB5	P25369	354 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	TIP1	P27654	210 aa	Predicted RBP	1.59	□□□□□ -2.16
RLM1	YPL089C	ATS1	P31386	333 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	PRO3	P32263	286 aa	Known RBP	1.59	□□□□□ -2.16
RLM1	YPL089C	NDC1	P32500	655 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	SPP381	P38282	291 aa	Predicted RBP	1.59	□□□□□ -2.16
RLM1	YPL089C	RRF1	P38771	230 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	KRE9	P39005	276 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	PAC11	P40960	533 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	PDR16	P53860	351 aa	Known RBP	1.59	□□□□□ -2.16
RLM1	YPL089C	MMT1	Q03218	510 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	RSN1	Q03516	953 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	SPH1	Q06160	661 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	IMA2	Q08295	589 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	TIM18	Q08749	192 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	MUM3	Q08750	479 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	RNH203	Q12338	110 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	HIF1	Q12373	385 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	SFG1	Q12507	346 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	NBL1	Q3E7Y6	73 aa		1.59	□□□□□ -2.16
RLM1	YPL089C	MTF1	P14908	341 aa	Known RBP	1.58	□□□□□ -2.16
RLM1	YPL089C	SAG1	P20840	650 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	SKN1	P33336	771 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	MTC4	P38335	694 aa	Known RBP	1.58	□□□□□ -2.16
RLM1	YPL089C	MSG5	P38590	489 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	YHR177W	P38867	453 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	MST28	P39552	234 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	RRT5	P43607	289 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	RTT101	P47050	842 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	POP6	P53218	158 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	RTT102	P53330	157 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	PRO2	P54885	456 aa	Known RBP	1.58	□□□□□ -2.16
RLM1	YPL089C	ADA2	Q02336	434 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	STD1	Q02794	444 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	PIR3	Q03180	325 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	BET5	Q03630	159 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	URC2	Q04411	772 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	RRP9	Q06506	573 aa	Known RBP	1.58	□□□□□ -2.16
RLM1	YPL089C	SGT1	Q08446	395 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	PPT2	Q12036	173 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	AYT1	Q12226	474 aa		1.58	□□□□□ -2.16
RLM1	YPL089C	PKH2	Q12236	1081 aa	Known RBP	1.58	□□□□□ -2.16
RLM1	YPL089C	OPI3	P05375	206 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	RPL12A	P0CX53	165 aa	Known RBP	1.57	□□□□□ -2.16
RLM1	YPL089C	RPL12B	P0CX54	165 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	SAM1	P10659	382 aa	Known RBP	1.57	□□□□□ -2.16
RLM1	YPL089C	DAL5	P15365	543 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	SAM2	P19358	384 aa	Known RBP	1.57	□□□□□ -2.16
RLM1	YPL089C	CPR3	P25719	182 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	SUR1	P33300	382 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	YOX1	P34161	385 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	PTK1	P36002	662 aa	Predicted RBP	1.57	□□□□□ -2.16
RLM1	YPL089C	YBR056W	P38081	501 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	YBL028C	P38202	106 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	OSW5	P40219	148 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	ALG8	P40351	577 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	RPR2	P40571	144 aa		1.57	□□□□□ -2.16
RLM1	YPL089C	GPI8	P49018	411 aa		1.57	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms