RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA2	YKR077W	RAD57	P25301	460 aa		4.4	□□□□□ -1.71
MSA2	YKR077W	DAL2	P25335	343 aa		4.4	□□□□□ -1.71
MSA2	YKR077W	VMA8	P32610	256 aa	Known RBP	4.4	□□□□□ -1.71
MSA2	YKR077W	MNS1	P32906	549 aa		4.4	□□□□□ -1.71
MSA2	YKR077W	VHS2	P40463	436 aa		4.4	□□□□□ -1.71
MSA2	YKR077W	MTM1	P53320	366 aa		4.4	□□□□□ -1.71
MSA2	YKR077W	URH1	Q04179	340 aa		4.4	□□□□□ -1.71
MSA2	YKR077W	HRI1	Q05905	244 aa	Known RBP	4.4	□□□□□ -1.71
MSA2	YKR077W	AEP3	Q12089	606 aa		4.4	□□□□□ -1.71
MSA2	YKR077W	COX3	P00420	269 aa		4.39	□□□□□ -1.71
MSA2	YKR077W	IMA3	P0CW40	589 aa		4.39	□□□□□ -1.71
MSA2	YKR077W	IMA4	P0CW41	589 aa		4.39	□□□□□ -1.71
MSA2	YKR077W	ASC1	P38011	319 aa	Known RBP	4.39	□□□□□ -1.71
MSA2	YKR077W	YBR056W	P38081	501 aa		4.39	□□□□□ -1.71
MSA2	YKR077W	PAN6	P40459	309 aa		4.39	□□□□□ -1.71
MSA2	YKR077W	YGR111W	P53265	400 aa		4.39	□□□□□ -1.71
MSA2	YKR077W	CWC25	P53854	179 aa	Known RBP	4.39	□□□□□ -1.71
MSA2	YKR077W	RHO5	P53879	331 aa	Known RBP	4.39	□□□□□ -1.71
MSA2	YKR077W	BCH1	Q05029	724 aa		4.39	□□□□□ -1.71
MSA2	YKR077W	IMA2	Q08295	589 aa		4.39	□□□□□ -1.71
MSA2	YKR077W	RRG7	Q08774	242 aa	Predicted RBP	4.39	□□□□□ -1.71
MSA2	YKR077W	RPS8A	P0CX39	200 aa	Known RBP	4.38	□□□□□ -1.71
MSA2	YKR077W	RPS8B	P0CX40	200 aa	Known RBP	4.38	□□□□□ -1.71
MSA2	YKR077W	CLN3	P13365	580 aa		4.38	□□□□□ -1.71
MSA2	YKR077W	YEL045C	P32616	141 aa		4.38	□□□□□ -1.71
MSA2	YKR077W	PXA2	P34230	853 aa		4.38	□□□□□ -1.71
MSA2	YKR077W	HEL1	P36113	551 aa		4.38	□□□□□ -1.71
MSA2	YKR077W	MSG5	P38590	489 aa		4.38	□□□□□ -1.71
MSA2	YKR077W	JLP2	P40206	208 aa		4.38	□□□□□ -1.71
MSA2	YKR077W	SFH5	P47008	294 aa		4.38	□□□□□ -1.71
MSA2	YKR077W	RPN9	Q04062	393 aa	Known RBP	4.38	□□□□□ -1.71
MSA2	YKR077W	CYC3	P06182	269 aa		4.37	□□□□□ -1.71
MSA2	YKR077W	ARO3	P14843	370 aa	Known RBP	4.37	□□□□□ -1.71
MSA2	YKR077W	ISY1	P21374	235 aa	Predicted RBP	4.37	□□□□□ -1.71
MSA2	YKR077W	CDC60	P26637	1090 aa	Known RBP	4.37	□□□□□ -1.71
MSA2	YKR077W	SWD3	P38123	315 aa		4.37	□□□□□ -1.71
MSA2	YKR077W	ZTA1	P38230	334 aa	Known RBP	4.37	□□□□□ -1.71
MSA2	YKR077W	GAT2	P40209	560 aa		4.37	□□□□□ -1.71
MSA2	YKR077W	YPS6	P40583	537 aa		4.37	□□□□□ -1.71
MSA2	YKR077W	YML6	P51998	286 aa		4.37	□□□□□ -1.71
MSA2	YKR077W	PAL1	Q05518	499 aa	Known RBP	4.37	□□□□□ -1.71
MSA2	YKR077W	SNT309	Q06091	175 aa	Predicted RBP	4.37	□□□□□ -1.71
MSA2	YKR077W	TPT1	Q12272	230 aa	Known RBP	4.37	□□□□□ -1.71
MSA2	YKR077W	HRT3	Q12347	344 aa		4.37	□□□□□ -1.71
MSA2	YKR077W	NFT1	P0CE68	1218 aa		4.36	□□□□□ -1.71
MSA2	YKR077W	LDB16	P25587	256 aa		4.36	□□□□□ -1.71
MSA2	YKR077W	POP5	P28005	173 aa		4.36	□□□□□ -1.71
MSA2	YKR077W	OLA1	P38219	394 aa	Known RBP	4.36	□□□□□ -1.71
MSA2	YKR077W	SHE10	P53075	577 aa		4.36	□□□□□ -1.71
MSA2	YKR077W	CIK1	Q01649	594 aa		4.36	□□□□□ -1.71
MSA2	YKR077W	PRP42	Q03776	544 aa	Known RBP	4.36	□□□□□ -1.71
MSA2	YKR077W	RRP9	Q06506	573 aa	Known RBP	4.36	□□□□□ -1.71
MSA2	YKR077W	RUP1	Q12242	671 aa		4.36	□□□□□ -1.71
MSA2	YKR077W	YRM1	Q12340	786 aa		4.36	□□□□□ -1.71
MSA2	YKR077W	ADH2	P00331	348 aa	Known RBP	4.35	□□□□□ -1.71
MSA2	YKR077W	KAR9	P32526	644 aa		4.35	□□□□□ -1.71
MSA2	YKR077W	LTV1	P34078	463 aa		4.35	□□□□□ -1.71
MSA2	YKR077W	PRE5	P40302	234 aa	Known RBP	4.35	□□□□□ -1.71
MSA2	YKR077W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
MSA2	YKR077W	SDT1	P53078	280 aa		4.35	□□□□□ -1.71
MSA2	YKR077W	MMT1	Q03218	510 aa		4.35	□□□□□ -1.71
MSA2	YKR077W	DCI1	Q08558	271 aa		4.35	□□□□□ -1.71
MSA2	YKR077W	UAF30	Q08747	228 aa		4.35	□□□□□ -1.71
MSA2	YKR077W	GPM3	Q12326	303 aa		4.35	□□□□□ -1.71
MSA2	YKR077W	CYS4	P32582	507 aa	Known RBP	4.34	□□□□□ -1.71
MSA2	YKR077W	CHK1	P38147	527 aa		4.34	□□□□□ -1.71
MSA2	YKR077W	FAD1	P38913	306 aa		4.34	□□□□□ -1.71
MSA2	YKR077W	STD1	Q02794	444 aa		4.34	□□□□□ -1.71
MSA2	YKR077W	YLR456W	Q06199	204 aa		4.34	□□□□□ -1.71
MSA2	YKR077W	FDH1	Q08911	376 aa		4.34	□□□□□ -1.71
MSA2	YKR077W	SNU66	Q12420	587 aa	Predicted RBP	4.34	□□□□□ -1.71
MSA2	YKR077W	RVS161	P25343	265 aa	Known RBP	4.33	□□□□□ -1.72
MSA2	YKR077W	YCL068C	P25593	260 aa		4.33	□□□□□ -1.72
MSA2	YKR077W	RIM1	P32445	135 aa	Known RBP	4.33	□□□□□ -1.72
MSA2	YKR077W	RRP1	P35178	278 aa	Predicted RBP	4.33	□□□□□ -1.72
MSA2	YKR077W	ATP3	P38077	311 aa	Known RBP	4.33	□□□□□ -1.72
MSA2	YKR077W	PEX25	Q02969	394 aa		4.33	□□□□□ -1.72
MSA2	YKR077W	RAX1	Q08760	435 aa		4.33	□□□□□ -1.72
MSA2	YKR077W	ERP4	Q12450	207 aa		4.33	□□□□□ -1.72
MSA2	YKR077W	HSP104	P31539	908 aa	Known RBP	4.32	□□□□□ -1.72
MSA2	YKR077W	MRPL4	P36517	319 aa		4.32	□□□□□ -1.72
MSA2	YKR077W	STN1	P38960	494 aa		4.32	□□□□□ -1.72
MSA2	YKR077W	YER079W	P40052	210 aa	Known RBP	4.32	□□□□□ -1.72
MSA2	YKR077W	BRO1	P48582	844 aa		4.32	□□□□□ -1.72
MSA2	YKR077W	GYL1	Q04322	720 aa		4.32	□□□□□ -1.72
MSA2	YKR077W	NDE2	Q07500	545 aa		4.32	□□□□□ -1.72
MSA2	YKR077W	RBD2	Q12270	262 aa		4.32	□□□□□ -1.72
MSA2	YKR077W	DST1	P07273	309 aa		4.31	□□□□□ -1.72
MSA2	YKR077W	SIM1	P40472	476 aa		4.31	□□□□□ -1.72
MSA2	YKR077W	MDE1	P47095	244 aa		4.31	□□□□□ -1.72
MSA2	YKR077W	PIB2	P53191	635 aa		4.31	□□□□□ -1.72
MSA2	YKR077W	RSC1	P53236	928 aa		4.31	□□□□□ -1.72
MSA2	YKR077W	NUP116	Q02630	1113 aa		4.31	□□□□□ -1.72
MSA2	YKR077W	CCE1	Q03702	353 aa		4.31	□□□□□ -1.72
MSA2	YKR077W	YDR341C	Q05506	607 aa	Known RBP	4.31	□□□□□ -1.72
MSA2	YKR077W	TMC1	Q08422	150 aa	Predicted RBP	4.31	□□□□□ -1.72
MSA2	YKR077W	CDC21	P06785	304 aa		4.3	□□□□□ -1.72
MSA2	YKR077W	YIL029C	P40538	142 aa		4.3	□□□□□ -1.72
MSA2	YKR077W	IRC25	Q07951	179 aa		4.3	□□□□□ -1.72
MSA2	YKR077W	NCA2	Q12374	616 aa		4.3	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms