RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C ADH7P25377 361 aa9.43□□□□□ -0.9
YSR3YKR053C TOA1P32773 286 aa9.43□□□□□ -0.9
YSR3YKR053C MRPL17P36528 281 aa9.43□□□□□ -0.9
YSR3YKR053C HEK2P38199 381 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9 RIP-Chip
YSR3YKR053C ERP5P38819 212 aa9.43□□□□□ -0.9
YSR3YKR053C CIN4P39110 191 aa9.43□□□□□ -0.9
YSR3YKR053C PAC1P39946 494 aaKnown RBP9.43□□□□□ -0.9
YSR3YKR053C VPS73P53142 486 aaKnown RBP9.43□□□□□ -0.9
YSR3YKR053C YGR067CP53243 804 aa9.43□□□□□ -0.9
YSR3YKR053C SMA2Q04658 369 aa9.43□□□□□ -0.9
YSR3YKR053C YMR310CQ04867 317 aaPredicted RBP9.43□□□□□ -0.9
YSR3YKR053C SSQ1Q05931 657 aaPredicted RBP9.43□□□□□ -0.9
YSR3YKR053C YPS7Q06325 596 aa9.43□□□□□ -0.9
YSR3YKR053C GPN2Q08726 347 aaPredicted RBP9.43□□□□□ -0.9
YSR3YKR053C YOR365CQ08844 703 aa9.43□□□□□ -0.9
YSR3YKR053C YOR376WQ08900 122 aa9.43□□□□□ -0.9
YSR3YKR053C FDH1Q08911 376 aa9.43□□□□□ -0.9
YSR3YKR053C NSL1Q12143 216 aa9.43□□□□□ -0.9
YSR3YKR053C RPL7BQ12213 244 aaKnown RBP9.43□□□□□ -0.9
YSR3YKR053C RPN6Q12377 434 aa9.43□□□□□ -0.9
YSR3YKR053C CDC9P04819 755 aa9.42□□□□□ -0.9
YSR3YKR053C RPT5P33297 434 aaKnown RBP9.42□□□□□ -0.9
YSR3YKR053C IAH1P41734 238 aa9.42□□□□□ -0.9
YSR3YKR053C MDV1P47025 714 aa9.42□□□□□ -0.9
YSR3YKR053C APS3P47064 194 aa9.42□□□□□ -0.9
YSR3YKR053C ATP22P50273 684 aaPredicted RBP9.42□□□□□ -0.9
YSR3YKR053C CDH1P53197 566 aa9.42□□□□□ -0.9
YSR3YKR053C YOL131WQ08270 108 aa9.42□□□□□ -0.9
YSR3YKR053C MLH3Q12083 715 aa9.42□□□□□ -0.9
YSR3YKR053C CYT1P07143 309 aa9.41□□□□□ -0.9
YSR3YKR053C YSF3P0C074 85 aaPredicted RBP9.41□□□□□ -0.9
YSR3YKR053C CCA1P21269 546 aa9.41□□□□□ -0.9
YSR3YKR053C YCL049CP25577 312 aa9.41□□□□□ -0.9
YSR3YKR053C NUP2P32499 720 aa9.41□□□□□ -0.9
YSR3YKR053C VPS51P36116 164 aa9.41□□□□□ -0.9
YSR3YKR053C MOH1P38191 138 aa9.41□□□□□ -0.9
YSR3YKR053C FES1P38260 290 aa9.41□□□□□ -0.9
YSR3YKR053C RGI1P40043 161 aaPredicted RBP9.41□□□□□ -0.9
YSR3YKR053C IMA5P40884 581 aa9.41□□□□□ -0.9
YSR3YKR053C UBX6P47049 396 aa9.41□□□□□ -0.9
YSR3YKR053C YJR141WP47172 347 aaPredicted RBP9.41□□□□□ -0.9
YSR3YKR053C UBC9P50623 157 aaPredicted RBP9.41□□□□□ -0.9
YSR3YKR053C ROM1P53046 1155 aa9.41□□□□□ -0.9
YSR3YKR053C RNH70P53331 553 aa9.41□□□□□ -0.9
YSR3YKR053C COS7Q07788 383 aa9.41□□□□□ -0.9
YSR3YKR053C YLL007CQ07799 665 aa9.41□□□□□ -0.9
YSR3YKR053C YLR036CQ07986 203 aa9.41□□□□□ -0.9
YSR3YKR053C MEC1P38111 2368 aa9.41□□□□□ -0.9
YSR3YKR053C TY4B-PA0A0B7P3V8 1104 aa9.4□□□□□ -0.9
YSR3YKR053C AAC3P18238 307 aa9.4□□□□□ -0.9
YSR3YKR053C CUE2P36075 443 aaKnown RBP9.4□□□□□ -0.9
YSR3YKR053C TSC10P38342 320 aa9.4□□□□□ -0.9
YSR3YKR053C LYS12P40495 371 aaKnown RBP9.4□□□□□ -0.9
YSR3YKR053C RLP7P40693 322 aaKnown RBP9.4□□□□□ -0.9
YSR3YKR053C SNO3P43544 222 aa9.4□□□□□ -0.9
YSR3YKR053C YJR115WP47152 169 aa9.4□□□□□ -0.9
YSR3YKR053C PAC10P48363 199 aa9.4□□□□□ -0.9
YSR3YKR053C RPS12P48589 143 aaKnown RBP9.4□□□□□ -0.9
YSR3YKR053C DIA3P52290 468 aa9.4□□□□□ -0.9
YSR3YKR053C HOS2P53096 452 aaPredicted RBP9.4□□□□□ -0.9
YSR3YKR053C DIA2Q08496 732 aaPredicted RBP9.4□□□□□ -0.9
YSR3YKR053C ATP6P00854 259 aa9.39□□□□□ -0.91
YSR3YKR053C TPK2P06245 380 aa9.39□□□□□ -0.91
YSR3YKR053C TOP3P13099 656 aa9.39□□□□□ -0.91
YSR3YKR053C CSM1P25651 190 aa9.39□□□□□ -0.91
YSR3YKR053C YGL015CP33199 130 aa9.39□□□□□ -0.91
YSR3YKR053C MRX1P40050 688 aa9.39□□□□□ -0.91
YSR3YKR053C YJL068CP40363 299 aa9.39□□□□□ -0.91
YSR3YKR053C YIL067CP40514 678 aa9.39□□□□□ -0.91
YSR3YKR053C MRPS18P42847 217 aa9.39□□□□□ -0.91
YSR3YKR053C ARI1P53111 347 aaKnown RBP9.39□□□□□ -0.91
YSR3YKR053C HOL1P53389 586 aa9.39□□□□□ -0.91
YSR3YKR053C UBP2Q01476 1272 aa9.39□□□□□ -0.91
YSR3YKR053C YDR209CQ03480 137 aa9.39□□□□□ -0.91
YSR3YKR053C GGA1Q06336 557 aa9.39□□□□□ -0.91
YSR3YKR053C YOR342CQ12182 319 aa9.39□□□□□ -0.91
YSR3YKR053C RIB2Q12362 591 aaKnown RBP9.39□□□□□ -0.91
YSR3YKR053C YOR032W-AQ8TGS1 66 aa9.39□□□□□ -0.91
YSR3YKR053C AI1P03875 834 aa9.38□□□□□ -0.91
YSR3YKR053C ARG3P05150 338 aa9.38□□□□□ -0.91
YSR3YKR053C RPL20AP0CX23 172 aaKnown RBP9.38□□□□□ -0.91
YSR3YKR053C RPL20BP0CX24 172 aaPredicted RBP9.38□□□□□ -0.91
YSR3YKR053C GPI12P23797 304 aa9.38□□□□□ -0.91
YSR3YKR053C OXP1P28273 1286 aa9.38□□□□□ -0.91
YSR3YKR053C MCM7P38132 845 aa9.38□□□□□ -0.91
YSR3YKR053C ROT2P38138 954 aa9.38□□□□□ -0.91
YSR3YKR053C IST2P38250 946 aa9.38□□□□□ -0.91
YSR3YKR053C YHR177WP38867 453 aa9.38□□□□□ -0.91
YSR3YKR053C TPC1P53257 314 aa9.38□□□□□ -0.91
YSR3YKR053C SRP1Q02821 542 aaKnown RBP9.38□□□□□ -0.91
YSR3YKR053C YDR476CQ03362 224 aa9.38□□□□□ -0.91
YSR3YKR053C CYK3Q07533 885 aa9.38□□□□□ -0.91
YSR3YKR053C BSC1Q12140 328 aa9.38□□□□□ -0.91
YSR3YKR053C SKS1Q12505 502 aa9.38□□□□□ -0.91
YSR3YKR053C ATG14P38270 344 aa9.37□□□□□ -0.91
YSR3YKR053C MNN9P39107 395 aaKnown RBP9.37□□□□□ -0.91
YSR3YKR053C TPA1P40032 644 aaKnown RBP9.37□□□□□ -0.91
YSR3YKR053C RIC1P40395 1056 aa9.37□□□□□ -0.91
YSR3YKR053C PHB1P40961 287 aa9.37□□□□□ -0.91
YSR3YKR053C USE1P53146 245 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms