RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP82YJL061W SRL2Q12020 392 aa2.09□□□□□ -2.07
NUP82YJL061W RUP1Q12242 671 aa2.09□□□□□ -2.07
NUP82YJL061W PET123P17558 318 aa2.09□□□□□ -2.08
NUP82YJL061W DAL2P25335 343 aa2.09□□□□□ -2.08
NUP82YJL061W LTV1P34078 463 aa2.09□□□□□ -2.08
NUP82YJL061W BUD27P43573 796 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
NUP82YJL061W SFH5P47008 294 aa2.09□□□□□ -2.08
NUP82YJL061W RPN9Q04062 393 aaKnown RBP2.09□□□□□ -2.08
NUP82YJL061W URH1Q04179 340 aa2.09□□□□□ -2.08
NUP82YJL061W HRI1Q05905 244 aaKnown RBP2.09□□□□□ -2.08
NUP82YJL061W DCI1Q08558 271 aa2.09□□□□□ -2.08
NUP82YJL061W TMS1Q12116 473 aa2.09□□□□□ -2.08
NUP82YJL061W ERP4Q12450 207 aa2.09□□□□□ -2.08
NUP82YJL061W TRP1P00912 224 aa2.08□□□□□ -2.08
NUP82YJL061W REV1P12689 985 aa2.08□□□□□ -2.08
NUP82YJL061W MNS1P32906 549 aa2.08□□□□□ -2.08
NUP82YJL061W ZTA1P38230 334 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W YBR137WP38276 179 aa2.08□□□□□ -2.08
NUP82YJL061W CWC25P53854 179 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W RHO5P53879 331 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W BCH1Q05029 724 aa2.08□□□□□ -2.08
NUP82YJL061W PAL1Q05518 499 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W TPT1Q12272 230 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W ASC1P38011 319 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W ATP3P38077 311 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W SDS24P38314 527 aa2.08□□□□□ -2.08
NUP82YJL061W SER3P40054 469 aa2.08□□□□□ -2.08
NUP82YJL061W GAT2P40209 560 aa2.08□□□□□ -2.08
NUP82YJL061W YPS6P40583 537 aa2.08□□□□□ -2.08
NUP82YJL061W VPS9P54787 451 aa2.08□□□□□ -2.08
NUP82YJL061W MMT1Q03218 510 aa2.08□□□□□ -2.08
NUP82YJL061W PRP42Q03776 544 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W SXM1Q04175 944 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W RRP9Q06506 573 aaKnown RBP2.08□□□□□ -2.08
NUP82YJL061W MRPL35Q06678 367 aa2.08□□□□□ -2.08
NUP82YJL061W NDE2Q07500 545 aa2.08□□□□□ -2.08
NUP82YJL061W SNU66Q12420 587 aaPredicted RBP2.08□□□□□ -2.08
NUP82YJL061W COX3P00420 269 aa2.07□□□□□ -2.08
NUP82YJL061W IMA3P0CW40 589 aa2.07□□□□□ -2.08
NUP82YJL061W IMA4P0CW41 589 aa2.07□□□□□ -2.08
NUP82YJL061W POP5P28005 173 aa2.07□□□□□ -2.08
NUP82YJL061W HSP104P31539 908 aaKnown RBP2.07□□□□□ -2.08
NUP82YJL061W RRP1P35178 278 aaPredicted RBP2.07□□□□□ -2.08
NUP82YJL061W PAN6P40459 309 aa2.07□□□□□ -2.08
NUP82YJL061W BRO1P48582 844 aa2.07□□□□□ -2.08
NUP82YJL061W MTM1P53320 366 aa2.07□□□□□ -2.08
NUP82YJL061W STD1Q02794 444 aa2.07□□□□□ -2.08
NUP82YJL061W IMA2Q08295 589 aa2.07□□□□□ -2.08
NUP82YJL061W RRG7Q08774 242 aaPredicted RBP2.07□□□□□ -2.08
NUP82YJL061W CEX1Q12453 761 aa2.07□□□□□ -2.08
NUP82YJL061W ARO3P14843 370 aaKnown RBP2.06□□□□□ -2.08
NUP82YJL061W RIM1P32445 135 aaKnown RBP2.06□□□□□ -2.08
NUP82YJL061W CYS4P32582 507 aaKnown RBP2.06□□□□□ -2.08
NUP82YJL061W YEL045CP32616 141 aa2.06□□□□□ -2.08
NUP82YJL061W PEX5P35056 612 aa2.06□□□□□ -2.08
NUP82YJL061W HEL1P36113 551 aa2.06□□□□□ -2.08
NUP82YJL061W JLP2P40206 208 aa2.06□□□□□ -2.08
NUP82YJL061W SHE10P53075 577 aa2.06□□□□□ -2.08
NUP82YJL061W PEX25Q02969 394 aa2.06□□□□□ -2.08
NUP82YJL061W GYL1Q04322 720 aa2.06□□□□□ -2.08
NUP82YJL061W YLR456WQ06199 204 aa2.06□□□□□ -2.08
NUP82YJL061W UAF30Q08747 228 aa2.06□□□□□ -2.08
NUP82YJL061W GPM3Q12326 303 aa2.06□□□□□ -2.08
NUP82YJL061W PDE2P06776 526 aa2.06□□□□□ -2.08
NUP82YJL061W NFT1P0CE68 1218 aa2.06□□□□□ -2.08
NUP82YJL061W YCL068CP25593 260 aa2.06□□□□□ -2.08
NUP82YJL061W CDC60P26637 1090 aaKnown RBP2.06□□□□□ -2.08
NUP82YJL061W KAR9P32526 644 aa2.06□□□□□ -2.08
NUP82YJL061W CHK1P38147 527 aa2.06□□□□□ -2.08
NUP82YJL061W MSG5P38590 489 aa2.06□□□□□ -2.08
NUP82YJL061W FAD1P38913 306 aa2.06□□□□□ -2.08
NUP82YJL061W SDT1P53078 280 aa2.06□□□□□ -2.08
NUP82YJL061W PIB2P53191 635 aa2.06□□□□□ -2.08
NUP82YJL061W SNT309Q06091 175 aaPredicted RBP2.06□□□□□ -2.08
NUP82YJL061W RAX1Q08760 435 aa2.06□□□□□ -2.08
NUP82YJL061W YRM1Q12340 786 aa2.06□□□□□ -2.08
NUP82YJL061W CYC3P06182 269 aa2.05□□□□□ -2.08
NUP82YJL061W CDC21P06785 304 aa2.05□□□□□ -2.08
NUP82YJL061W DST1P07273 309 aa2.05□□□□□ -2.08
NUP82YJL061W CLN3P13365 580 aa2.05□□□□□ -2.08
NUP82YJL061W ISY1P21374 235 aaPredicted RBP2.05□□□□□ -2.08
NUP82YJL061W RVS161P25343 265 aaKnown RBP2.05□□□□□ -2.08
NUP82YJL061W STN1P38960 494 aa2.05□□□□□ -2.08
NUP82YJL061W COX14P39103 70 aa2.05□□□□□ -2.08
NUP82YJL061W YER079WP40052 210 aaKnown RBP2.05□□□□□ -2.08
NUP82YJL061W YIL029CP40538 142 aa2.05□□□□□ -2.08
NUP82YJL061W YJL055WP47044 245 aa2.05□□□□□ -2.08
NUP82YJL061W RSC1P53236 928 aa2.05□□□□□ -2.08
NUP82YJL061W MTQ1P53944 314 aa2.05□□□□□ -2.08
NUP82YJL061W YDR341CQ05506 607 aaKnown RBP2.05□□□□□ -2.08
NUP82YJL061W IRC25Q07951 179 aa2.05□□□□□ -2.08
NUP82YJL061W SPE3Q12074 293 aaKnown RBP2.05□□□□□ -2.08
NUP82YJL061W HRT3Q12347 344 aa2.05□□□□□ -2.08
NUP82YJL061W RPS8AP0CX39 200 aaKnown RBP2.05□□□□□ -2.08
NUP82YJL061W RPS8BP0CX40 200 aaKnown RBP2.05□□□□□ -2.08
NUP82YJL061W NAM2P11325 894 aa2.05□□□□□ -2.08
NUP82YJL061W LDB16P25587 256 aa2.05□□□□□ -2.08
NUP82YJL061W SWD3P38123 315 aa2.05□□□□□ -2.08
NUP82YJL061W INM1P38710 295 aa2.05□□□□□ -2.08
NUP82YJL061W MMF1P40185 145 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms