RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS23, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS23	YDR246W	DUG1	P43616	481 aa	Known RBP	4.86	□□□□□ -1.63
TRS23	YDR246W	VPS25	P47142	202 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	TIS11	P47977	285 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	YIP4	P53093	235 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	COQ6	P53318	479 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	PRP38	Q00723	242 aa	Predicted RBP	4.86	□□□□□ -1.63
TRS23	YDR246W	RAD30	Q04049	632 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	YMR226C	Q05016	267 aa	Known RBP	4.86	□□□□□ -1.63
TRS23	YDR246W	VAM6	Q07468	1049 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	YDL121C	Q07541	149 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	LOT6	Q07923	191 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	YOR387C	Q08910	206 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	JLP1	Q12358	412 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	YKL018C-A	Q3E7A7	99 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	ARG81	P05085	880 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	HEM1	P09950	548 aa	Predicted RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	MAS1	P10507	462 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	SCH9	P11792	824 aa	Known RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	HMG2	P12684	1045 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	MSS116	P15424	664 aa	Known RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	YAP1	P19880	650 aa	Known RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	MRPL8	P22353	238 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	DPB2	P24482	689 aa	Predicted RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	CTR86	P25355	563 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	SGF29	P25554	259 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	PGS1	P25578	521 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	MRPL9	P31334	269 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	YMC1	P32331	307 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	RPT5	P33297	434 aa	Known RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	DHR2	P36009	735 aa	Predicted RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	ALY1	P36117	915 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	MRPL17	P36528	281 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	YBR241C	P38142	488 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	APM3	P38153	483 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	LDB7	P38210	180 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	RFS1	P38234	210 aa	Known RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	YBR138C	P38277	524 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	EHT1	P38295	451 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	FTH1	P38310	465 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	YBR285W	P38354	144 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	YHR045W	P38775	560 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	APE4	P38821	490 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	DHH1	P39517	506 aa	Known RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	ALG8	P40351	577 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	ELP2	P42935	788 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	AGP3	P43548	558 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	PET130	P47065	347 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	COG1	P53079	417 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	PXR1	P53335	271 aa	Predicted RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	YNL095C	P53932	642 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	EFR3	Q03653	782 aa	Known RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	RAD33	Q04231	177 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	YMR111C	Q04461	462 aa	Predicted RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	MCP2	Q06567	569 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	UAF30	Q08747	228 aa		4.85	□□□□□ -1.63
TRS23	YDR246W	AHA1	Q12449	350 aa	Known RBP	4.85	□□□□□ -1.63
TRS23	YDR246W	THP2	O13539	261 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	HXK2	P04807	486 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	FBA1	P14540	359 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	POL4	P25615	582 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	CYS4	P32582	507 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	RPS1A	P33442	255 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	LHS1	P36016	881 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	YHR218W	P38899	603 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	SWD1	P39706	426 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	GPP2	P40106	250 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	YRB2	P40517	327 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	GCD10	P41814	478 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	RMD8	P43620	662 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	UPF3	P48412	387 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	NAS6	P50086	228 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	SHY1	P53266	389 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	DSL1	P53847	754 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	TOF2	Q02208	771 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	SVL3	Q03088	825 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	YDR239C	Q03780	787 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	TRM12	Q04235	462 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	GPI11	Q06636	219 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	DTD1	Q07648	150 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	YLR012C	Q07927	99 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	NGL1	Q08213	363 aa	Known RBP	4.84	□□□□□ -1.63
TRS23	YDR246W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
TRS23	YDR246W	VCX1	Q99385	411 aa		4.84	□□□□□ -1.63
TRS23	YDR246W	SPT3	P06844	337 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	DST1	P07273	309 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	SST2	P11972	698 aa	Known RBP	4.83	□□□□□ -1.64
TRS23	YDR246W	PDE1	P22434	369 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	UBC8	P28263	218 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	SYN8	P31377	255 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	SAC1	P32368	623 aa	Known RBP	4.83	□□□□□ -1.64
TRS23	YDR246W	PUP2	P32379	260 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	TFB1	P32776	642 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	COX13	P32799	129 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	NPL6	P32832	435 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	SEC66	P33754	206 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	MRPL40	P36534	297 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	AVT6	P40074	448 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	YJL070C	P40361	888 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	RIC1	P40395	1056 aa		4.83	□□□□□ -1.64
TRS23	YDR246W	PAN6	P40459	309 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms