RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C PGM1P33401 570 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C ECT1P33412 323 aa4.32□□□□□ -1.72
PRP28YDR243C MSN4P33749 630 aa4.32□□□□□ -1.72
PRP28YDR243C SPC34P36131 295 aa4.32□□□□□ -1.72
PRP28YDR243C AVT5P38176 459 aa4.32□□□□□ -1.72
PRP28YDR243C IST2P38250 946 aa4.32□□□□□ -1.72
PRP28YDR243C SHG1P38337 142 aa4.32□□□□□ -1.72
PRP28YDR243C BIG1P38813 335 aa4.32□□□□□ -1.72
PRP28YDR243C BST1P43571 1029 aa4.32□□□□□ -1.72
PRP28YDR243C BNA1P47096 177 aa4.32□□□□□ -1.72
PRP28YDR243C YJR107WP47145 328 aa4.32□□□□□ -1.72
PRP28YDR243C YJR111CP47148 283 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C RPS12P48589 143 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C TAD1P53065 400 aa4.32□□□□□ -1.72
PRP28YDR243C YGL204CP53089 101 aa4.32□□□□□ -1.72
PRP28YDR243C GET1P53192 235 aa4.32□□□□□ -1.72
PRP28YDR243C ARE2P53629 642 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C HCH1P53834 153 aa4.32□□□□□ -1.72
PRP28YDR243C RPL22BP56628 122 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C YPL108WQ02872 168 aaPredicted RBP4.32□□□□□ -1.72
PRP28YDR243C MUS81Q04149 632 aaPredicted RBP4.32□□□□□ -1.72
PRP28YDR243C SMA2Q04658 369 aa4.32□□□□□ -1.72
PRP28YDR243C UTP21Q06078 939 aaPredicted RBP4.32□□□□□ -1.72
PRP28YDR243C YLR455WQ06188 304 aa4.32□□□□□ -1.72
PRP28YDR243C YPR127WQ06494 345 aa4.32□□□□□ -1.72
PRP28YDR243C MDM32Q12171 622 aa4.32□□□□□ -1.72
PRP28YDR243C YDR215CQ12240 137 aa4.32□□□□□ -1.72
PRP28YDR243C YOP1Q12402 180 aa4.32□□□□□ -1.72
PRP28YDR243C TIF6Q12522 245 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C SPO14P36126 1683 aa4.31□□□□□ -1.72
PRP28YDR243C YLR358CO13565 187 aa4.31□□□□□ -1.72
PRP28YDR243C TPK3P05986 398 aa4.31□□□□□ -1.72
PRP28YDR243C SNF3P10870 884 aa4.31□□□□□ -1.72
PRP28YDR243C CBS2P14905 389 aa4.31□□□□□ -1.72
PRP28YDR243C PHO81P17442 1178 aa4.31□□□□□ -1.72
PRP28YDR243C BEM1P29366 551 aa4.31□□□□□ -1.72
PRP28YDR243C ATP7P30902 174 aa4.31□□□□□ -1.72
PRP28YDR243C DEG1P31115 442 aaKnown RBP4.31□□□□□ -1.72
PRP28YDR243C PRO3P32263 286 aaKnown RBP4.31□□□□□ -1.72
PRP28YDR243C LST4P34239 828 aa4.31□□□□□ -1.72
PRP28YDR243C RRT2P38332 387 aa4.31□□□□□ -1.72
PRP28YDR243C MMS21P38632 267 aa4.31□□□□□ -1.72
PRP28YDR243C IPI1P38803 334 aaPredicted RBP4.31□□□□□ -1.72
PRP28YDR243C AIM46P38885 310 aa4.31□□□□□ -1.72
PRP28YDR243C MLH1P38920 769 aa4.31□□□□□ -1.72
PRP28YDR243C SOP4P39543 234 aaPredicted RBP4.31□□□□□ -1.72
PRP28YDR243C UIP3P39547 235 aa4.31□□□□□ -1.72
PRP28YDR243C RBG1P39729 369 aa4.31□□□□□ -1.72
PRP28YDR243C YEL025CP39991 1188 aa4.31□□□□□ -1.72
PRP28YDR243C YIL161WP40449 235 aaKnown RBP4.31□□□□□ -1.72
PRP28YDR243C YJL107CP42947 387 aa4.31□□□□□ -1.72
PRP28YDR243C AGP3P43548 558 aa4.31□□□□□ -1.72
PRP28YDR243C ARC1P46672 376 aaKnown RBP4.31□□□□□ -1.72
PRP28YDR243C ADO1P47143 340 aaKnown RBP4.31□□□□□ -1.72
PRP28YDR243C YJR154WP47181 346 aa4.31□□□□□ -1.72
PRP28YDR243C ASK10P48361 1146 aa4.31□□□□□ -1.72
PRP28YDR243C LCL3P53153 274 aa4.31□□□□□ -1.72
PRP28YDR243C POP6P53218 158 aa4.31□□□□□ -1.72
PRP28YDR243C TNA1P53322 534 aa4.31□□□□□ -1.72
PRP28YDR243C SSU72P53538 206 aaPredicted RBP4.31□□□□□ -1.72
PRP28YDR243C SPC98P53540 846 aa4.31□□□□□ -1.72
PRP28YDR243C HXT15P54854 567 aa4.31□□□□□ -1.72
PRP28YDR243C RHO3Q00245 231 aaKnown RBP4.31□□□□□ -1.72
PRP28YDR243C TRS31Q03337 283 aa4.31□□□□□ -1.72
PRP28YDR243C EFR3Q03653 782 aaKnown RBP4.31□□□□□ -1.72
PRP28YDR243C RSB1Q08417 382 aa4.31□□□□□ -1.72
PRP28YDR243C HRT3Q12347 344 aa4.31□□□□□ -1.72
PRP28YDR243C PCD1Q12524 340 aa4.31□□□□□ -1.72
PRP28YDR243C YGR161W-CQ3E744 92 aa4.31□□□□□ -1.72
PRP28YDR243C MED11Q99278 115 aa4.31□□□□□ -1.72
PRP28YDR243C YRF1-2P40105 1681 aa4.31□□□□□ -1.72
PRP28YDR243C NUP188P52593 1655 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C RAD7P06779 565 aa4.3□□□□□ -1.72
PRP28YDR243C TCP1P12612 559 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C CDC42P19073 191 aa4.3□□□□□ -1.72
PRP28YDR243C RFA1P22336 621 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C PRE7P23724 241 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C POF1P25576 258 aa4.3□□□□□ -1.72
PRP28YDR243C MRPL9P31334 269 aa4.3□□□□□ -1.72
PRP28YDR243C ARO7P32178 256 aa4.3□□□□□ -1.72
PRP28YDR243C PAH1P32567 862 aa4.3□□□□□ -1.72
PRP28YDR243C UGP1P32861 499 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C MOT2P34909 587 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C ECM8P38246 354 aa4.3□□□□□ -1.72
PRP28YDR243C YHK8P38776 514 aa4.3□□□□□ -1.72
PRP28YDR243C LRP1P38801 184 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C FMO1P38866 432 aa4.3□□□□□ -1.72
PRP28YDR243C EGD2P38879 174 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C IPL1P38991 367 aa4.3□□□□□ -1.72
PRP28YDR243C GIP4P39732 760 aa4.3□□□□□ -1.72
PRP28YDR243C YEL020CP39994 560 aa4.3□□□□□ -1.72
PRP28YDR243C PFA3P42836 336 aa4.3□□□□□ -1.72
PRP28YDR243C YNR061CP53747 219 aa4.3□□□□□ -1.72
PRP28YDR243C PRP42Q03776 544 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C YDR248CQ03786 193 aa4.3□□□□□ -1.72
PRP28YDR243C YLR283WQ05867 314 aa4.3□□□□□ -1.72
PRP28YDR243C MFG1Q07684 458 aa4.3□□□□□ -1.72
PRP28YDR243C TRE2Q08693 809 aa4.3□□□□□ -1.72
PRP28YDR243C SAM4Q08985 325 aaKnown RBP4.3□□□□□ -1.72
PRP28YDR243C SPC3Q12133 184 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms