RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeastyeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC53YDL132W AIP1P46680 615 aaKnown RBP1.98□□□□□ -2.09
CDC53YDL132W EFM3P47163 339 aa1.98□□□□□ -2.09
CDC53YDL132W FRE4P53746 719 aa1.98□□□□□ -2.09
CDC53YDL132W ESBP6P53918 673 aa1.98□□□□□ -2.09
CDC53YDL132W STD1Q02794 444 aa1.98□□□□□ -2.09
CDC53YDL132W MMT1Q03218 510 aa1.98□□□□□ -2.09
CDC53YDL132W MRPL51Q06090 140 aaPredicted RBP1.98□□□□□ -2.09
CDC53YDL132W ASA1Q06822 443 aa1.98□□□□□ -2.09
CDC53YDL132W NSE1Q07913 336 aa1.98□□□□□ -2.09
CDC53YDL132W AAD15Q08361 143 aa1.98□□□□□ -2.09
CDC53YDL132W RUP1Q12242 671 aa1.98□□□□□ -2.09
CDC53YDL132W RNR2P09938 399 aaKnown RBP1.98□□□□□ -2.09
CDC53YDL132W HXT2P23585 541 aa1.98□□□□□ -2.09
CDC53YDL132W GEX1P25596 615 aa1.98□□□□□ -2.09
CDC53YDL132W YCR100CP25606 316 aa1.98□□□□□ -2.09
CDC53YDL132W TRS65P32893 560 aa1.98□□□□□ -2.09
CDC53YDL132W SKN1P33336 771 aa1.98□□□□□ -2.09
CDC53YDL132W YKL097CP34245 136 aa1.98□□□□□ -2.09
CDC53YDL132W ATP3P38077 311 aaKnown RBP1.98□□□□□ -2.09
CDC53YDL132W ATM1P40416 690 aa1.98□□□□□ -2.09
CDC53YDL132W CSM2P40465 213 aa1.98□□□□□ -2.09
CDC53YDL132W RTT102P53330 157 aa1.98□□□□□ -2.09
CDC53YDL132W GPI15P53961 229 aa1.98□□□□□ -2.09
CDC53YDL132W MPS1P54199 764 aa1.98□□□□□ -2.09
CDC53YDL132W PNG1Q02890 363 aa1.98□□□□□ -2.09
CDC53YDL132W YMR087WQ04299 284 aa1.98□□□□□ -2.09
CDC53YDL132W MUM3Q08750 479 aa1.98□□□□□ -2.09
CDC53YDL132W YPR022CQ12139 1133 aa1.98□□□□□ -2.09
CDC53YDL132W APC2Q12440 853 aa1.98□□□□□ -2.09
CDC53YDL132W SFG1Q12507 346 aa1.98□□□□□ -2.09
CDC53YDL132W XRN1P22147 1528 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W TPK3P05986 398 aa1.97□□□□□ -2.09
CDC53YDL132W GAL3P13045 520 aa1.97□□□□□ -2.09
CDC53YDL132W MBR1P23493 339 aa1.97□□□□□ -2.09
CDC53YDL132W HMX1P32339 317 aa1.97□□□□□ -2.09
CDC53YDL132W ERG1P32476 496 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W SPT10P35208 640 aa1.97□□□□□ -2.09
CDC53YDL132W SWC5P38326 303 aa1.97□□□□□ -2.09
CDC53YDL132W TOM71P38825 639 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W MNN9P39107 395 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W PRP39P39682 629 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W PNC1P53184 216 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W BET4Q00618 327 aa1.97□□□□□ -2.09
CDC53YDL132W EGD1Q02642 157 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W MRP51Q02950 344 aa1.97□□□□□ -2.09
CDC53YDL132W TAF12Q03761 539 aa1.97□□□□□ -2.09
CDC53YDL132W SMP3Q04174 516 aa1.97□□□□□ -2.09
CDC53YDL132W BUR2Q05949 395 aa1.97□□□□□ -2.09
CDC53YDL132W YPR078CQ06813 372 aa1.97□□□□□ -2.09
CDC53YDL132W THI20Q08224 551 aa1.97□□□□□ -2.09
CDC53YDL132W ARG4P04076 463 aaPredicted RBP1.97□□□□□ -2.09
CDC53YDL132W THR4P16120 514 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W SAM2P19358 384 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W ILV6P25605 309 aaKnown RBP1.97□□□□□ -2.09
CDC53YDL132W MSK1P32048 576 aa1.97□□□□□ -2.09
CDC53YDL132W LEU5P38702 357 aa1.97□□□□□ -2.09
CDC53YDL132W YAL037WP39728 267 aa1.97□□□□□ -2.09
CDC53YDL132W CFD1P40558 293 aa1.97□□□□□ -2.09
CDC53YDL132W POP6P53218 158 aa1.97□□□□□ -2.09
CDC53YDL132W ATG2P53855 1592 aa1.97□□□□□ -2.09
CDC53YDL132W RIM13Q03792 727 aa1.97□□□□□ -2.09
CDC53YDL132W AIM33Q04516 312 aa1.97□□□□□ -2.09
CDC53YDL132W ATG34Q12292 412 aa1.97□□□□□ -2.09
CDC53YDL132W RNH203Q12338 110 aa1.97□□□□□ -2.09
CDC53YDL132W RRP36Q12481 300 aaPredicted RBP1.97□□□□□ -2.09
CDC53YDL132W PGK1P00560 416 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W TEF1P02994 458 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W ARF1P11076 181 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W CLN3P13365 580 aa1.96□□□□□ -2.1
CDC53YDL132W DBP3P20447 523 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W DBR1P24309 405 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W CIN8P27895 1000 aa1.96□□□□□ -2.1
CDC53YDL132W PTR2P32901 601 aa1.96□□□□□ -2.1
CDC53YDL132W PAD1P33751 242 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
CDC53YDL132W LIN1P38852 340 aaPredicted RBP1.96□□□□□ -2.1
CDC53YDL132W PSA1P41940 361 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W LAM5P43560 674 aa1.96□□□□□ -2.1
CDC53YDL132W GWT1P47026 490 aa1.96□□□□□ -2.1
CDC53YDL132W RSN1Q03516 953 aa1.96□□□□□ -2.1
CDC53YDL132W CAB5Q03941 241 aa1.96□□□□□ -2.1
CDC53YDL132W VPS20Q04272 221 aa1.96□□□□□ -2.1
CDC53YDL132W SNT309Q06091 175 aaPredicted RBP1.96□□□□□ -2.1
CDC53YDL132W VPS74Q06385 345 aa1.96□□□□□ -2.1
CDC53YDL132W LDS2Q08218 356 aa1.96□□□□□ -2.1
CDC53YDL132W ATX2Q12067 313 aa1.96□□□□□ -2.1
CDC53YDL132W YDL009CQ12210 107 aa1.96□□□□□ -2.1
CDC53YDL132W FSH3Q99369 266 aa1.96□□□□□ -2.1
CDC53YDL132W REV3P14284 1504 aa1.96□□□□□ -2.1
CDC53YDL132W YPT1P01123 206 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W ATP1P07251 545 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W LSB5P25369 354 aa1.96□□□□□ -2.1
CDC53YDL132W YUH1P35127 236 aa1.96□□□□□ -2.1
CDC53YDL132W MRPL37P36532 105 aa1.96□□□□□ -2.1
CDC53YDL132W YBR139WP38109 508 aa1.96□□□□□ -2.1
CDC53YDL132W RTC2P38279 296 aa1.96□□□□□ -2.1
CDC53YDL132W EMC2P47133 292 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W PMT5P52867 743 aa1.96□□□□□ -2.1
CDC53YDL132W YPL068CQ02749 293 aa1.96□□□□□ -2.1
CDC53YDL132W DIG1Q03063 452 aaKnown RBP1.96□□□□□ -2.1
CDC53YDL132W NUP53Q03790 475 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms