RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W CBS1P14066 229 aa1.76□□□□□ -2.13
HMRA1YCR097W CTR86P25355 563 aa1.76□□□□□ -2.13
HMRA1YCR097W PHA2P32452 334 aa1.76□□□□□ -2.13
HMRA1YCR097W GAT2P40209 560 aa1.76□□□□□ -2.13
HMRA1YCR097W VMA13P41807 478 aaKnown RBP1.76□□□□□ -2.13
HMRA1YCR097W RPL21AQ02753 160 aaKnown RBP1.76□□□□□ -2.13
HMRA1YCR097W RPL21BQ12672 160 aaKnown RBP1.76□□□□□ -2.13
HMRA1YCR097W BEM2P39960 2167 aaKnown RBP1.75□□□□□ -2.13
HMRA1YCR097W SEC63P14906 663 aa1.75□□□□□ -2.13
HMRA1YCR097W MRX6P48564 524 aa1.75□□□□□ -2.13
HMRA1YCR097W CLN1P20437 546 aa1.74□□□□□ -2.13
HMRA1YCR097W RRP1P35178 278 aaPredicted RBP1.74□□□□□ -2.13
HMRA1YCR097W CST26P38226 397 aa1.74□□□□□ -2.13
HMRA1YCR097W DOT5P40553 215 aa1.74□□□□□ -2.13
HMRA1YCR097W AIM24P47127 394 aa1.74□□□□□ -2.13
HMRA1YCR097W PHB2P50085 310 aa1.74□□□□□ -2.13
HMRA1YCR097W TWF1P53250 332 aa1.74□□□□□ -2.13
HMRA1YCR097W CLD1P53264 445 aa1.74□□□□□ -2.13
HMRA1YCR097W SKI8Q02793 397 aaPredicted RBP1.74□□□□□ -2.13
HMRA1YCR097W OAZ1Q02803 292 aa1.74□□□□□ -2.13
HMRA1YCR097W RPS19AP07280 144 aaKnown RBP1.73□□□□□ -2.13
HMRA1YCR097W RPS19BP07281 144 aaPredicted RBP1.73□□□□□ -2.13
HMRA1YCR097W DEP1P31385 405 aa1.73□□□□□ -2.13
HMRA1YCR097W PFS1P38872 237 aa1.73□□□□□ -2.13
HMRA1YCR097W YIR035CP40579 254 aa1.73□□□□□ -2.13
HMRA1YCR097W YJR011CP47086 261 aaPredicted RBP1.73□□□□□ -2.13
HMRA1YCR097W ATG16Q03818 150 aa1.73□□□□□ -2.13
HMRA1YCR097W MFG1Q07684 458 aa1.73□□□□□ -2.13
HMRA1YCR097W RAX1Q08760 435 aa1.73□□□□□ -2.13
HMRA1YCR097W SPS4P09937 338 aa1.72□□□□□ -2.13
HMRA1YCR097W SKN1P33336 771 aa1.72□□□□□ -2.13
HMRA1YCR097W YNL208WP40159 199 aaKnown RBP1.72□□□□□ -2.13
HMRA1YCR097W MAM33P40513 266 aa1.72□□□□□ -2.13
HMRA1YCR097W MEP3P53390 489 aa1.72□□□□□ -2.13
HMRA1YCR097W GIR2Q03768 265 aaPredicted RBP1.72□□□□□ -2.13
HMRA1YCR097W ECM7Q06200 448 aa1.72□□□□□ -2.13
HMRA1YCR097W RRP9Q06506 573 aaKnown RBP1.72□□□□□ -2.13
HMRA1YCR097W MDM36Q06820 579 aa1.72□□□□□ -2.13
HMRA1YCR097W SMC5Q08204 1093 aa1.72□□□□□ -2.13
HMRA1YCR097W RIM20Q12033 661 aa1.72□□□□□ -2.13
HMRA1YCR097W TIR4Q12218 487 aaPredicted RBP1.72□□□□□ -2.13
HMRA1YCR097W GPH1P06738 902 aaKnown RBP1.71□□□□□ -2.14
HMRA1YCR097W RIP1P08067 215 aa1.71□□□□□ -2.14
HMRA1YCR097W YCL068CP25593 260 aa1.71□□□□□ -2.14
HMRA1YCR097W SIN4P32259 974 aa1.71□□□□□ -2.14
HMRA1YCR097W VHC1P38329 1120 aa1.71□□□□□ -2.14
HMRA1YCR097W MET28P40573 187 aa1.71□□□□□ -2.14
HMRA1YCR097W LCB3P47013 409 aa1.71□□□□□ -2.14
HMRA1YCR097W YEF1P32622 495 aa1.7□□□□□ -2.14
HMRA1YCR097W TFB1P32776 642 aa1.7□□□□□ -2.14
HMRA1YCR097W SEC66P33754 206 aa1.7□□□□□ -2.14
HMRA1YCR097W MUD2P36084 527 aaKnown RBP1.7□□□□□ -2.14
HMRA1YCR097W RFC3P38629 340 aa1.7□□□□□ -2.14
HMRA1YCR097W VTC2P43585 828 aa1.7□□□□□ -2.14
HMRA1YCR097W GPI15P53961 229 aa1.7□□□□□ -2.14
HMRA1YCR097W SRL2Q12020 392 aa1.7□□□□□ -2.14
HMRA1YCR097W TPT1Q12272 230 aaKnown RBP1.7□□□□□ -2.14
HMRA1YCR097W COX13P32799 129 aa1.69□□□□□ -2.14
HMRA1YCR097W YHK8P38776 514 aa1.69□□□□□ -2.14
HMRA1YCR097W STB1P42845 420 aa1.69□□□□□ -2.14
HMRA1YCR097W YJL144WP47009 104 aa1.69□□□□□ -2.14
HMRA1YCR097W HST4P53688 370 aa1.69□□□□□ -2.14
HMRA1YCR097W TDA1Q03533 586 aa1.69□□□□□ -2.14
HMRA1YCR097W CCE1Q03702 353 aa1.69□□□□□ -2.14
HMRA1YCR097W YMR018WQ04364 514 aa1.69□□□□□ -2.14
HMRA1YCR097W CEX1Q12453 761 aa1.69□□□□□ -2.14
HMRA1YCR097W YPR096CO13587 100 aa1.68□□□□□ -2.14
HMRA1YCR097W DPH5P32469 300 aaPredicted RBP1.68□□□□□ -2.14
HMRA1YCR097W OPY2Q06810 360 aa1.68□□□□□ -2.14
HMRA1YCR097W YML133CQ03099 1374 aa1.68□□□□□ -2.14
HMRA1YCR097W YLL067CQ07888 1374 aa1.68□□□□□ -2.14
HMRA1YCR097W YLL066CQ99208 1374 aa1.68□□□□□ -2.14
HMRA1YCR097W CMC1P36064 111 aa1.67□□□□□ -2.14
HMRA1YCR097W NOP4P37838 685 aaKnown RBP1.67□□□□□ -2.14
HMRA1YCR097W YGP1P38616 354 aaKnown RBP1.67□□□□□ -2.14
HMRA1YCR097W YPT35P38815 214 aaKnown RBP1.67□□□□□ -2.14
HMRA1YCR097W FHL1P39521 936 aa1.67□□□□□ -2.14
HMRA1YCR097W VHT1P53241 593 aa1.67□□□□□ -2.14
HMRA1YCR097W PMT1P33775 817 aa1.66□□□□□ -2.14
HMRA1YCR097W AST1P35183 429 aa1.66□□□□□ -2.14
HMRA1YCR097W COQ5P49017 307 aa1.66□□□□□ -2.14
HMRA1YCR097W EAF3Q12432 401 aa1.66□□□□□ -2.14
HMRA1YCR097W CBF5P33322 483 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
HMRA1YCR097W YAL037WP39728 267 aa1.65□□□□□ -2.15
HMRA1YCR097W HXT14P42833 540 aa1.65□□□□□ -2.15
HMRA1YCR097W YGR250CP53316 781 aaKnown RBP1.65□□□□□ -2.15
HMRA1YCR097W RPT6Q01939 405 aaKnown RBP1.65□□□□□ -2.15
HMRA1YCR097W SEM1O94742 89 aa1.64□□□□□ -2.15
HMRA1YCR097W UTR5P32630 166 aa1.64□□□□□ -2.15
HMRA1YCR097W YEL057CP39983 233 aa1.64□□□□□ -2.15
HMRA1YCR097W LOT6Q07923 191 aa1.64□□□□□ -2.15
HMRA1YCR097W HEL1P36113 551 aa1.63□□□□□ -2.15
HMRA1YCR097W PEX22P39718 180 aa1.63□□□□□ -2.15
HMRA1YCR097W VPS75P53853 264 aa1.63□□□□□ -2.15
HMRA1YCR097W ALF1P53904 254 aa1.63□□□□□ -2.15
HMRA1YCR097W YLR345WQ06137 509 aa1.63□□□□□ -2.15
HMRA1YCR097W ATG29Q12092 213 aa1.63□□□□□ -2.15
HMRA1YCR097W TAF12Q03761 539 aa1.62□□□□□ -2.15
HMRA1YCR097W VMS1Q04311 632 aaKnown RBP1.62□□□□□ -2.15
HMRA1YCR097W PIS1P06197 220 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms