RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W ULA1Q12059 462 aa3.49□□□□□ -1.85
MSD1YPL104W YVC1Q12324 675 aa3.49□□□□□ -1.85
MSD1YPL104W PST1Q12355 444 aa3.49□□□□□ -1.85
MSD1YPL104W JLP1Q12358 412 aa3.49□□□□□ -1.85
MSD1YPL104W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
MSD1YPL104W YCL012CQ8J0M4 134 aa3.49□□□□□ -1.85
MSD1YPL104W ARG81P05085 880 aa3.49□□□□□ -1.85
MSD1YPL104W STE3P06783 470 aa3.49□□□□□ -1.85
MSD1YPL104W DST1P07273 309 aa3.49□□□□□ -1.85
MSD1YPL104W MRP13P12686 339 aa3.49□□□□□ -1.85
MSD1YPL104W URA4P20051 364 aa3.49□□□□□ -1.85
MSD1YPL104W FPR1P20081 114 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W BET2P20133 325 aa3.49□□□□□ -1.85
MSD1YPL104W GBP2P25555 427 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
MSD1YPL104W IMG2P25642 146 aaPredicted RBP3.49□□□□□ -1.85
MSD1YPL104W NGG1P32494 702 aa3.49□□□□□ -1.85
MSD1YPL104W PET309P32522 965 aaPredicted RBP3.49□□□□□ -1.85
MSD1YPL104W GMH1P36125 273 aa3.49□□□□□ -1.85
MSD1YPL104W MRPL17P36528 281 aa3.49□□□□□ -1.85
MSD1YPL104W YCR087C-AP37263 153 aa3.49□□□□□ -1.85
MSD1YPL104W BMT2P38278 337 aa3.49□□□□□ -1.85
MSD1YPL104W TDP1P38319 544 aa3.49□□□□□ -1.85
MSD1YPL104W BEM4P39011 633 aa3.49□□□□□ -1.85
MSD1YPL104W OSW5P40219 148 aa3.49□□□□□ -1.85
MSD1YPL104W UPF3P48412 387 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W VMA10P48836 114 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W YGR015CP53208 328 aa3.49□□□□□ -1.85
MSD1YPL104W ZRG17P53735 605 aa3.49□□□□□ -1.85
MSD1YPL104W IDP3P53982 420 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W RAD33Q04231 177 aa3.49□□□□□ -1.85
MSD1YPL104W GRS2Q06817 618 aa3.49□□□□□ -1.85
MSD1YPL104W YPL245WQ12179 454 aaKnown RBP3.49□□□□□ -1.85
MSD1YPL104W SEC39Q12745 709 aa3.49□□□□□ -1.85
MSD1YPL104W YKL018C-AQ3E7A7 99 aa3.49□□□□□ -1.85
MSD1YPL104W SRN2Q99176 213 aa3.49□□□□□ -1.85
MSD1YPL104W FAB1P34756 2278 aa3.48□□□□□ -1.85
MSD1YPL104W RAS2P01120 322 aaKnown RBP3.48□□□□□ -1.85
MSD1YPL104W BCY1P07278 416 aaKnown RBP3.48□□□□□ -1.85
MSD1YPL104W UGA1P17649 471 aa3.48□□□□□ -1.85
MSD1YPL104W PHO84P25297 587 aaKnown RBP3.48□□□□□ -1.85
MSD1YPL104W SPB1P25582 841 aaPredicted RBP3.48□□□□□ -1.85
MSD1YPL104W RPT5P33297 434 aaKnown RBP3.48□□□□□ -1.85
MSD1YPL104W SOL2P37262 315 aa3.48□□□□□ -1.85
MSD1YPL104W TAE1P38340 232 aa3.48□□□□□ -1.85
MSD1YPL104W FAD1P38913 306 aa3.48□□□□□ -1.85
MSD1YPL104W FAA2P39518 744 aa3.48□□□□□ -1.85
MSD1YPL104W BNA1P47096 177 aa3.48□□□□□ -1.85
MSD1YPL104W YJR149WP47177 404 aa3.48□□□□□ -1.85
MSD1YPL104W MDM34P53083 459 aa3.48□□□□□ -1.85
MSD1YPL104W ARI1P53111 347 aaKnown RBP3.48□□□□□ -1.85
MSD1YPL104W HOL1P53389 586 aa3.48□□□□□ -1.85
MSD1YPL104W IRC15Q02733 499 aa3.48□□□□□ -1.85
MSD1YPL104W GIP3Q03016 1276 aa3.48□□□□□ -1.85
MSD1YPL104W YMR010WQ03687 405 aa3.48□□□□□ -1.85
MSD1YPL104W EMI1Q04406 187 aa3.48□□□□□ -1.85
MSD1YPL104W YOL159CQ08300 171 aa3.48□□□□□ -1.85
MSD1YPL104W YPR011CQ12251 326 aa3.48□□□□□ -1.85
MSD1YPL104W STT4P37297 1900 aa3.48□□□□□ -1.85
MSD1YPL104W CBP2P03874 630 aaPredicted RBP3.47□□□□□ -1.85
MSD1YPL104W RPS14AP06367 137 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W FUM1P08417 488 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W HOP1P20050 605 aa3.47□□□□□ -1.85
MSD1YPL104W YSR3P23501 404 aa3.47□□□□□ -1.85
MSD1YPL104W CLB3P24870 427 aa3.47□□□□□ -1.85
MSD1YPL104W PUP3P25451 205 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W RER1P25560 188 aa3.47□□□□□ -1.85
MSD1YPL104W UGP1P32861 499 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W YKL097CP34245 136 aa3.47□□□□□ -1.85
MSD1YPL104W GLG1P36143 616 aa3.47□□□□□ -1.85
MSD1YPL104W YBR241CP38142 488 aa3.47□□□□□ -1.85
MSD1YPL104W SLM4P38247 162 aa3.47□□□□□ -1.85
MSD1YPL104W INM1P38710 295 aa3.47□□□□□ -1.85
MSD1YPL104W YHR078WP38799 552 aa3.47□□□□□ -1.85
MSD1YPL104W YHR127WP38833 243 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W RPS14BP39516 138 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W ECM10P39987 644 aa3.47□□□□□ -1.85
MSD1YPL104W RGI1P40043 161 aaPredicted RBP3.47□□□□□ -1.85
MSD1YPL104W SNL1P40548 159 aa3.47□□□□□ -1.85
MSD1YPL104W PFA3P42836 336 aa3.47□□□□□ -1.85
MSD1YPL104W FMP32P43557 207 aa3.47□□□□□ -1.85
MSD1YPL104W MET12P46151 657 aa3.47□□□□□ -1.85
MSD1YPL104W YJR030CP47101 745 aa3.47□□□□□ -1.85
MSD1YPL104W NBP35P52920 328 aa3.47□□□□□ -1.85
MSD1YPL104W MPS2P53159 387 aa3.47□□□□□ -1.85
MSD1YPL104W DSL1P53847 754 aa3.47□□□□□ -1.85
MSD1YPL104W ASI2P53895 289 aa3.47□□□□□ -1.85
MSD1YPL104W YNL095CP53932 642 aa3.47□□□□□ -1.85
MSD1YPL104W MPS1P54199 764 aa3.47□□□□□ -1.85
MSD1YPL104W SDH1Q00711 640 aa3.47□□□□□ -1.85
MSD1YPL104W SKI8Q02793 397 aaPredicted RBP3.47□□□□□ -1.85
MSD1YPL104W MET31Q03081 177 aa3.47□□□□□ -1.85
MSD1YPL104W EFR3Q03653 782 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W CLU1Q03690 1277 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W VHS1Q03785 461 aa3.47□□□□□ -1.85
MSD1YPL104W YHC1Q05900 231 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W ATG29Q12092 213 aa3.47□□□□□ -1.85
MSD1YPL104W PSY3Q12318 242 aa3.47□□□□□ -1.85
MSD1YPL104W RPN6Q12377 434 aa3.47□□□□□ -1.85
MSD1YPL104W NSI1Q12457 570 aa3.47□□□□□ -1.85
MSD1YPL104W GPM1P00950 247 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms