RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W MEP3P53390 489 aa1.8□□□□□ -2.12
HIT1YJR055W YNR048WP53740 393 aa1.8□□□□□ -2.12
HIT1YJR055W FRE4P53746 719 aa1.8□□□□□ -2.12
HIT1YJR055W KTR5P53966 522 aaPredicted RBP1.8□□□□□ -2.12
HIT1YJR055W IZH2Q12442 317 aa1.8□□□□□ -2.12
HIT1YJR055W PRM7Q12459 698 aa1.8□□□□□ -2.12
HIT1YJR055W PAN1P32521 1480 aa1.8□□□□□ -2.12
HIT1YJR055W YPK9Q12697 1472 aa1.8□□□□□ -2.12
HIT1YJR055W SIN3P22579 1536 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-HO13535 1793 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-DR5P0C2I2 1755 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-DR6P0C2I3 1755 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-LR2P0C2I5 1755 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-LR3P0C2I6 1755 aaKnown RBP1.8□□□□□ -2.12
HIT1YJR055W TY1B-PR1P0C2I9 1755 aaKnown RBP1.8□□□□□ -2.12
HIT1YJR055W TY1B-PR2P0C2J0 1756 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-PR3P0C2J1 1755 aaKnown RBP1.8□□□□□ -2.12
HIT1YJR055W TY1B-JR1P47098 1755 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-ML2Q03434 1755 aaKnown RBP1.8□□□□□ -2.12
HIT1YJR055W TY1B-ER1Q03612 1755 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-ML1Q04711 1755 aaKnown RBP1.8□□□□□ -2.12
HIT1YJR055W TY1B-GR2Q12269 1755 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-OLQ12273 1755 aa1.8□□□□□ -2.12
HIT1YJR055W TY1B-PLQ12414 1755 aaKnown RBP1.8□□□□□ -2.12
HIT1YJR055W SEC53P07283 254 aaKnown RBP1.79□□□□□ -2.12
HIT1YJR055W SNT1P25357 1226 aa1.79□□□□□ -2.12
HIT1YJR055W GYP6P32806 458 aa1.79□□□□□ -2.12
HIT1YJR055W MRE11P32829 692 aa1.79□□□□□ -2.12
HIT1YJR055W SPT10P35208 640 aa1.79□□□□□ -2.12
HIT1YJR055W TIM17P39515 158 aa1.79□□□□□ -2.12
HIT1YJR055W YER186CP40101 306 aa1.79□□□□□ -2.12
HIT1YJR055W YGR066CP53242 292 aa1.79□□□□□ -2.12
HIT1YJR055W DSL1P53847 754 aa1.79□□□□□ -2.12
HIT1YJR055W RPT6Q01939 405 aaKnown RBP1.79□□□□□ -2.12
HIT1YJR055W YRM1Q12340 786 aa1.79□□□□□ -2.12
HIT1YJR055W TY2B-BQ12491 1770 aa1.78□□□□□ -2.12
HIT1YJR055W SPO14P36126 1683 aa1.78□□□□□ -2.12
HIT1YJR055W DNF3Q12674 1656 aa1.78□□□□□ -2.12
HIT1YJR055W NUP170P38181 1502 aa1.78□□□□□ -2.12
HIT1YJR055W SCC2Q04002 1493 aa1.78□□□□□ -2.12
HIT1YJR055W TEF1P02994 458 aaKnown RBP1.78□□□□□ -2.12
HIT1YJR055W MUD2P36084 527 aaKnown RBP1.78□□□□□ -2.12
HIT1YJR055W CCT2P39076 527 aaKnown RBP1.78□□□□□ -2.12
HIT1YJR055W RMD8P43620 662 aa1.78□□□□□ -2.12
HIT1YJR055W PET130P47065 347 aa1.78□□□□□ -2.12
HIT1YJR055W ECM27P47144 725 aa1.78□□□□□ -2.12
HIT1YJR055W YDR387CQ04162 555 aa1.78□□□□□ -2.12
HIT1YJR055W TAP42Q04372 366 aa1.78□□□□□ -2.12
HIT1YJR055W AIM32Q04689 311 aa1.78□□□□□ -2.12
HIT1YJR055W RTP1Q12751 981 aa1.78□□□□□ -2.12
HIT1YJR055W HIR2P32480 875 aa1.77□□□□□ -2.13
HIT1YJR055W RML2P32611 393 aa1.77□□□□□ -2.13
HIT1YJR055W RTC2P38279 296 aa1.77□□□□□ -2.13
HIT1YJR055W TFG2P41896 400 aaPredicted RBP1.77□□□□□ -2.13
HIT1YJR055W MDE1P47095 244 aa1.77□□□□□ -2.13
HIT1YJR055W ARE2P53629 642 aaKnown RBP1.77□□□□□ -2.13
HIT1YJR055W MRPS16Q02608 121 aa1.77□□□□□ -2.13
HIT1YJR055W YDL121CQ07541 149 aa1.77□□□□□ -2.13
HIT1YJR055W RCN2Q12044 265 aa1.77□□□□□ -2.13
HIT1YJR055W NUP159P40477 1460 aa1.76□□□□□ -2.13
HIT1YJR055W INH1P01097 85 aa1.76□□□□□ -2.13
HIT1YJR055W ARG4P04076 463 aaPredicted RBP1.76□□□□□ -2.13
HIT1YJR055W RHO2P06781 192 aa1.76□□□□□ -2.13
HIT1YJR055W DFR1P07807 211 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
HIT1YJR055W SMY1P32364 656 aaKnown RBP1.76□□□□□ -2.13
HIT1YJR055W APE2P32454 952 aaKnown RBP1.76□□□□□ -2.13
HIT1YJR055W PRP21P32524 280 aaPredicted RBP1.76□□□□□ -2.13
HIT1YJR055W REC114P32841 428 aa1.76□□□□□ -2.13
HIT1YJR055W NOP4P37838 685 aaKnown RBP1.76□□□□□ -2.13
HIT1YJR055W LYS1P38998 373 aaRIP-Chip data1.76□□□□□ -2.13not detected
HIT1YJR055W DOT5P40553 215 aa1.76□□□□□ -2.13
HIT1YJR055W MRX6P48564 524 aa1.76□□□□□ -2.13
HIT1YJR055W FLC3P53121 802 aa1.76□□□□□ -2.13
HIT1YJR055W MKC7P53379 596 aa1.76□□□□□ -2.13
HIT1YJR055W ADA2Q02336 434 aa1.76□□□□□ -2.13
HIT1YJR055W HSP31Q04432 237 aa1.76□□□□□ -2.13
HIT1YJR055W DNL4Q08387 944 aaPredicted RBP1.76□□□□□ -2.13
HIT1YJR055W BUD21Q08492 214 aaPredicted RBP1.76□□□□□ -2.13
HIT1YJR055W CTI6Q08923 506 aa1.76□□□□□ -2.13
HIT1YJR055W YDR056CQ12025 205 aa1.76□□□□□ -2.13
HIT1YJR055W SEC39Q12745 709 aa1.76□□□□□ -2.13
HIT1YJR055W VPS13Q07878 3144 aa1.76□□□□□ -2.13
HIT1YJR055W TY1B-DR3Q99231 1755 aa1.75□□□□□ -2.13
HIT1YJR055W HIS4P00815 799 aaKnown RBP1.75□□□□□ -2.13
HIT1YJR055W CBS1P14066 229 aa1.75□□□□□ -2.13
HIT1YJR055W AAC3P18238 307 aa1.75□□□□□ -2.13
HIT1YJR055W AFG1P32317 509 aa1.75□□□□□ -2.13
HIT1YJR055W NAB3P38996 802 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
HIT1YJR055W RMD9P53140 646 aaKnown RBP1.75□□□□□ -2.13
HIT1YJR055W YGR018CP53211 109 aa1.75□□□□□ -2.13
HIT1YJR055W VPS72Q03388 795 aa1.75□□□□□ -2.13
HIT1YJR055W LIP2Q06005 328 aa1.75□□□□□ -2.13
HIT1YJR055W NDE2Q07500 545 aa1.75□□□□□ -2.13
HIT1YJR055W JID1Q12350 301 aa1.75□□□□□ -2.13
HIT1YJR055W ORT1Q12375 292 aa1.75□□□□□ -2.13
HIT1YJR055W RPO21P04050 1733 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W YLR278CQ05854 1341 aa1.74□□□□□ -2.13
HIT1YJR055W ARO1P08566 1588 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W PDR10P51533 1564 aa1.74□□□□□ -2.13
HIT1YJR055W FOB1O13329 566 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms