RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W FMC1P40491 155 aa3.6□□□□□ -1.83
UBP12YJL197W YPR003CP53394 754 aa3.6□□□□□ -1.83
UBP12YJL197W YNL260CP53846 198 aa3.6□□□□□ -1.83
UBP12YJL197W SHR3Q02774 210 aa3.6□□□□□ -1.83
UBP12YJL197W SOR2Q07786 357 aa3.6□□□□□ -1.83
UBP12YJL197W YLL007CQ07799 665 aa3.6□□□□□ -1.83
UBP12YJL197W MSN2P33748 704 aa3.6□□□□□ -1.83
UBP12YJL197W TSA1P34760 196 aaKnown RBP3.6□□□□□ -1.83
UBP12YJL197W RPC25P35718 212 aa3.6□□□□□ -1.83
UBP12YJL197W MIT1P40002 666 aa3.6□□□□□ -1.83
UBP12YJL197W SCC4P40090 624 aa3.6□□□□□ -1.83
UBP12YJL197W SAS2P40963 338 aa3.6□□□□□ -1.83
UBP12YJL197W NUP53Q03790 475 aa3.6□□□□□ -1.83
UBP12YJL197W SHS1Q07657 551 aa3.6□□□□□ -1.83
UBP12YJL197W ATP11P32453 318 aa3.6□□□□□ -1.83
UBP12YJL197W ARC19P33204 171 aaKnown RBP3.6□□□□□ -1.83
UBP12YJL197W MSN4P33749 630 aa3.6□□□□□ -1.83
UBP12YJL197W PTK1P36002 662 aaPredicted RBP3.6□□□□□ -1.83
UBP12YJL197W YMR134WP40207 237 aa3.6□□□□□ -1.83
UBP12YJL197W MSS2P40990 351 aa3.6□□□□□ -1.83
UBP12YJL197W BNA3P47039 444 aaKnown RBP3.6□□□□□ -1.83
UBP12YJL197W YDL186WP48568 277 aa3.6□□□□□ -1.83
UBP12YJL197W PGA2P53903 129 aa3.6□□□□□ -1.83
UBP12YJL197W APC2Q12440 853 aa3.6□□□□□ -1.83
UBP12YJL197W RTT107P38850 1070 aa3.59□□□□□ -1.83
UBP12YJL197W YGL185CP53100 379 aa3.59□□□□□ -1.83
UBP12YJL197W YTP1P53584 459 aa3.59□□□□□ -1.83
UBP12YJL197W RET3P53600 189 aa3.59□□□□□ -1.83
UBP12YJL197W URH1Q04179 340 aa3.59□□□□□ -1.83
UBP12YJL197W FMP16Q12497 93 aa3.59□□□□□ -1.83
UBP12YJL197W RTC1Q08281 1341 aa3.59□□□□□ -1.83
UBP12YJL197W YPR089WO13585 888 aa3.59□□□□□ -1.83
UBP12YJL197W CDC21P06785 304 aa3.59□□□□□ -1.83
UBP12YJL197W SUA5P32579 426 aa3.59□□□□□ -1.83
UBP12YJL197W RPC34P32910 317 aa3.59□□□□□ -1.83
UBP12YJL197W CBF5P33322 483 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
UBP12YJL197W PAD1P33751 242 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
UBP12YJL197W RPC37P36121 282 aa3.59□□□□□ -1.83
UBP12YJL197W PRP39P39682 629 aaKnown RBP3.59□□□□□ -1.83
UBP12YJL197W DRN1P53255 507 aaKnown RBP3.59□□□□□ -1.83
UBP12YJL197W URC2Q04411 772 aa3.59□□□□□ -1.83
UBP12YJL197W SYO1Q07395 620 aa3.59□□□□□ -1.83
UBP12YJL197W AIM39Q08223 395 aa3.59□□□□□ -1.83
UBP12YJL197W CLP1Q08685 445 aaPredicted RBP3.59□□□□□ -1.83
UBP12YJL197W YRM1Q12340 786 aa3.59□□□□□ -1.83
UBP12YJL197W CYS4P32582 507 aaKnown RBP3.59□□□□□ -1.84
UBP12YJL197W FRE1P32791 686 aa3.59□□□□□ -1.84
UBP12YJL197W PET117Q02771 107 aa3.59□□□□□ -1.84
UBP12YJL197W GPN3Q06543 272 aa3.59□□□□□ -1.84
UBP12YJL197W RGT1P32862 1170 aa3.58□□□□□ -1.84
UBP12YJL197W BMH2P34730 273 aaKnown RBP3.58□□□□□ -1.84
UBP12YJL197W YAL037WP39728 267 aa3.58□□□□□ -1.84
UBP12YJL197W YER085CP40058 173 aa3.58□□□□□ -1.84
UBP12YJL197W RTR1P40084 226 aaPredicted RBP3.58□□□□□ -1.84
UBP12YJL197W TOS3P43637 560 aa3.58□□□□□ -1.84
UBP12YJL197W YOR012WQ12351 137 aa3.58□□□□□ -1.84
UBP12YJL197W SUC2P00724 532 aa3.58□□□□□ -1.84
UBP12YJL197W CAR2P07991 424 aaKnown RBP3.58□□□□□ -1.84
UBP12YJL197W YUR1P26725 428 aa3.58□□□□□ -1.84
UBP12YJL197W MSK1P32048 576 aa3.58□□□□□ -1.84
UBP12YJL197W YPS1P32329 569 aa3.58□□□□□ -1.84
UBP12YJL197W PPS1P38148 807 aa3.58□□□□□ -1.84
UBP12YJL197W LAG1P38703 411 aa3.58□□□□□ -1.84
UBP12YJL197W SYG1P40528 902 aa3.58□□□□□ -1.84
UBP12YJL197W POP1P41812 875 aa3.58□□□□□ -1.84
UBP12YJL197W DUG3P53871 357 aa3.58□□□□□ -1.84
UBP12YJL197W NUP1P20676 1076 aa3.58□□□□□ -1.84
UBP12YJL197W RAD57P25301 460 aa3.58□□□□□ -1.84
UBP12YJL197W HRR25P29295 494 aaKnown RBP3.58□□□□□ -1.84
UBP12YJL197W ERG1P32476 496 aaKnown RBP3.58□□□□□ -1.84
UBP12YJL197W OCT1P35999 772 aa3.58□□□□□ -1.84
UBP12YJL197W AIM3P38266 947 aaKnown RBP3.58□□□□□ -1.84
UBP12YJL197W LCP5P40079 357 aaPredicted RBP3.58□□□□□ -1.84
UBP12YJL197W KTR5P53966 522 aaPredicted RBP3.58□□□□□ -1.84
UBP12YJL197W ASI1P54074 624 aa3.58□□□□□ -1.84
UBP12YJL197W MRPS17Q03246 237 aaPredicted RBP3.58□□□□□ -1.84
UBP12YJL197W RNH203Q12338 110 aa3.58□□□□□ -1.84
UBP12YJL197W HIS4P00815 799 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W RAD52P06778 471 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W SNF3P10870 884 aa3.57□□□□□ -1.84
UBP12YJL197W MSS51P32335 436 aa3.57□□□□□ -1.84
UBP12YJL197W BUD2P33314 1104 aa3.57□□□□□ -1.84
UBP12YJL197W CBR1P38626 284 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W YER034WP40022 185 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W YJL070CP40361 888 aa3.57□□□□□ -1.84
UBP12YJL197W SNL1P40548 159 aa3.57□□□□□ -1.84
UBP12YJL197W OTU1P43558 301 aa3.57□□□□□ -1.84
UBP12YJL197W STE24P47154 453 aa3.57□□□□□ -1.84
UBP12YJL197W DSL1P53847 754 aa3.57□□□□□ -1.84
UBP12YJL197W YNL134CP53912 376 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W YVH1Q02256 364 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W MRPL35Q06678 367 aa3.57□□□□□ -1.84
UBP12YJL197W YLR040CQ07988 224 aa3.57□□□□□ -1.84
UBP12YJL197W YOL107WQ12239 342 aa3.57□□□□□ -1.84
UBP12YJL197W PAA1Q12447 191 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W AIM45Q12480 344 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W CHS1P08004 1131 aa3.57□□□□□ -1.84
UBP12YJL197W RPL12AP0CX53 165 aaKnown RBP3.57□□□□□ -1.84
UBP12YJL197W RPL12BP0CX54 165 aa3.57□□□□□ -1.84
UBP12YJL197W FUN19P28003 413 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms