RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C THI73Q07904 523 aa7.98□□□□□ -1.13
SRP54YPR088C MST1P07236 462 aa7.97□□□□□ -1.13
SRP54YPR088C FUR1P18562 216 aaKnown RBP7.97□□□□□ -1.13
SRP54YPR088C TYR1P20049 452 aa7.97□□□□□ -1.13
SRP54YPR088C CMK2P22517 447 aa7.97□□□□□ -1.13
SRP54YPR088C PLB1P39105 664 aa7.97□□□□□ -1.13
SRP54YPR088C YJL049WP47048 450 aa7.97□□□□□ -1.13
SRP54YPR088C RTS3P53289 263 aa7.97□□□□□ -1.13
SRP54YPR088C YNL095CP53932 642 aa7.97□□□□□ -1.13
SRP54YPR088C EGD1Q02642 157 aaKnown RBP7.97□□□□□ -1.13
SRP54YPR088C PEX12Q04370 399 aa7.97□□□□□ -1.13
SRP54YPR088C YKU80Q04437 629 aa7.97□□□□□ -1.13
SRP54YPR088C SPB1P25582 841 aaPredicted RBP7.96□□□□□ -1.13
SRP54YPR088C IDH2P28241 369 aaKnown RBP7.96□□□□□ -1.13
SRP54YPR088C SWH1P35845 1188 aa7.96□□□□□ -1.13
SRP54YPR088C ARA1P38115 344 aa7.96□□□□□ -1.13
SRP54YPR088C MNN9P39107 395 aaKnown RBP7.96□□□□□ -1.13
SRP54YPR088C PRM10P42946 383 aa7.96□□□□□ -1.13
SRP54YPR088C GUS1P46655 708 aaKnown RBP RIP-Chip data7.96□□□□□ -1.13not detected
SRP54YPR088C HXT16P47185 567 aa7.96□□□□□ -1.13
SRP54YPR088C YNR068CP53754 272 aa7.96□□□□□ -1.13
SRP54YPR088C HXT15P54854 567 aa7.96□□□□□ -1.13
SRP54YPR088C REX4Q08237 289 aa7.96□□□□□ -1.13
SRP54YPR088C PSY3Q12318 242 aa7.96□□□□□ -1.13
SRP54YPR088C RPS17AP02407 136 aaKnown RBP7.96□□□□□ -1.14
SRP54YPR088C RPP1BP10622 106 aaKnown RBP7.96□□□□□ -1.14
SRP54YPR088C RPS17BP14127 136 aaKnown RBP7.96□□□□□ -1.14
SRP54YPR088C BUB3P26449 341 aa7.96□□□□□ -1.14
SRP54YPR088C PEX3P28795 441 aa7.96□□□□□ -1.14
SRP54YPR088C APT2P36973 181 aa7.96□□□□□ -1.14
SRP54YPR088C ASC1P38011 319 aaKnown RBP7.96□□□□□ -1.14
SRP54YPR088C RCK1P38622 512 aa7.96□□□□□ -1.14
SRP54YPR088C YHL012WP38709 493 aa7.96□□□□□ -1.14
SRP54YPR088C LYS1P38998 373 aaRIP-Chip data7.96□□□□□ -1.14 RIP-Chip
SRP54YPR088C CEM1P39525 442 aa7.96□□□□□ -1.14
SRP54YPR088C RSP5P39940 809 aaKnown RBP7.96□□□□□ -1.14
SRP54YPR088C RIC1P40395 1056 aa7.96□□□□□ -1.14
SRP54YPR088C PSA1P41940 361 aaKnown RBP7.96□□□□□ -1.14
SRP54YPR088C CIS3P47001 227 aa7.96□□□□□ -1.14
SRP54YPR088C YGR250CP53316 781 aaKnown RBP7.96□□□□□ -1.14
SRP54YPR088C ASI2P53895 289 aa7.96□□□□□ -1.14
SRP54YPR088C SKI8Q02793 397 aaPredicted RBP7.96□□□□□ -1.14
SRP54YPR088C GAD1Q04792 585 aa7.96□□□□□ -1.14
SRP54YPR088C GPI11Q06636 219 aa7.96□□□□□ -1.14
SRP54YPR088C NSI1Q12457 570 aa7.96□□□□□ -1.14
SRP54YPR088C PFK27Q12471 397 aaPredicted RBP7.96□□□□□ -1.14
SRP54YPR088C RAD7P06779 565 aa7.95□□□□□ -1.14
SRP54YPR088C ALG7P07286 448 aa7.95□□□□□ -1.14
SRP54YPR088C YAP1P19880 650 aaKnown RBP7.95□□□□□ -1.14
SRP54YPR088C CLB3P24870 427 aa7.95□□□□□ -1.14
SRP54YPR088C CTS1P29029 562 aa7.95□□□□□ -1.14
SRP54YPR088C NUP2P32499 720 aa7.95□□□□□ -1.14
SRP54YPR088C CDC13P32797 924 aaKnown RBP7.95□□□□□ -1.14
SRP54YPR088C YHR112CP38716 378 aa7.95□□□□□ -1.14
SRP54YPR088C RBG1P39729 369 aa7.95□□□□□ -1.14
SRP54YPR088C LRO1P40345 661 aa7.95□□□□□ -1.14
SRP54YPR088C VHR1P40522 640 aa7.95□□□□□ -1.14
SRP54YPR088C AGP3P43548 558 aa7.95□□□□□ -1.14
SRP54YPR088C PMT4P46971 762 aa7.95□□□□□ -1.14
SRP54YPR088C YJL043WP47053 257 aa7.95□□□□□ -1.14
SRP54YPR088C ARE2P53629 642 aaKnown RBP7.95□□□□□ -1.14
SRP54YPR088C PDR8Q06149 701 aa7.95□□□□□ -1.14
SRP54YPR088C XYL2Q07993 356 aa7.95□□□□□ -1.14
SRP54YPR088C YPR022CQ12139 1133 aa7.95□□□□□ -1.14
SRP54YPR088C YOL107WQ12239 342 aa7.95□□□□□ -1.14
SRP54YPR088C MHF2Q3E829 80 aa7.95□□□□□ -1.14
SRP54YPR088C HTA1P04911 132 aaKnown RBP7.94□□□□□ -1.14
SRP54YPR088C STE7P06784 515 aa7.94□□□□□ -1.14
SRP54YPR088C GAL7P08431 366 aa7.94□□□□□ -1.14
SRP54YPR088C SNF4P12904 322 aa7.94□□□□□ -1.14
SRP54YPR088C GAL3P13045 520 aa7.94□□□□□ -1.14
SRP54YPR088C DMC1P25453 334 aa7.94□□□□□ -1.14
SRP54YPR088C FMP46P36141 133 aaKnown RBP7.94□□□□□ -1.14
SRP54YPR088C SLM4P38247 162 aa7.94□□□□□ -1.14
SRP54YPR088C VRG4P40107 337 aa7.94□□□□□ -1.14
SRP54YPR088C SNL1P40548 159 aa7.94□□□□□ -1.14
SRP54YPR088C VMA10P48836 114 aaKnown RBP7.94□□□□□ -1.14
SRP54YPR088C TOM22P49334 152 aa7.94□□□□□ -1.14
SRP54YPR088C RMR1P53060 241 aa7.94□□□□□ -1.14
SRP54YPR088C SUN4P53616 420 aa7.94□□□□□ -1.14
SRP54YPR088C YML096WQ04489 525 aa7.94□□□□□ -1.14
SRP54YPR088C PUN1Q06991 263 aa7.94□□□□□ -1.14
SRP54YPR088C THP1Q08231 455 aa7.94□□□□□ -1.14
SRP54YPR088C RRP40Q08285 240 aaKnown RBP7.94□□□□□ -1.14
SRP54YPR088C PUS9Q12069 462 aa7.94□□□□□ -1.14
SRP54YPR088C DIN7Q12086 430 aa7.94□□□□□ -1.14
SRP54YPR088C MDM12Q92328 271 aa7.94□□□□□ -1.14
SRP54YPR088C TRM1P15565 570 aaKnown RBP7.93□□□□□ -1.14
SRP54YPR088C RNQ1P25367 405 aa7.93□□□□□ -1.14
SRP54YPR088C ARP2P32381 391 aaKnown RBP7.93□□□□□ -1.14
SRP54YPR088C ERG1P32476 496 aaKnown RBP7.93□□□□□ -1.14
SRP54YPR088C SSO1P32867 290 aa7.93□□□□□ -1.14
SRP54YPR088C RIM101P33400 625 aa7.93□□□□□ -1.14
SRP54YPR088C MNN2P38069 597 aa7.93□□□□□ -1.14
SRP54YPR088C RIO2P40160 425 aaKnown RBP7.93□□□□□ -1.14
SRP54YPR088C ARF3P40994 183 aaRIP-Chip data7.93□□□□□ -1.14not detected
SRP54YPR088C RAD17P48581 401 aa7.93□□□□□ -1.14
SRP54YPR088C ATP22P50273 684 aaPredicted RBP7.93□□□□□ -1.14
SRP54YPR088C MRK1P50873 501 aa7.93□□□□□ -1.14
SRP54YPR088C SPR6Q01684 191 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms