RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W MCP2Q06567 569 aa3.16□□□□□ -1.9
YLR400WYLR400W RDR1Q08904 546 aa3.16□□□□□ -1.9
YLR400WYLR400W YLR112WQ12130 139 aa3.16□□□□□ -1.9
YLR400WYLR400W HSP42Q12329 375 aa3.16□□□□□ -1.9
YLR400WYLR400W YMR230W-AQ3E7B5 62 aa3.16□□□□□ -1.9
YLR400WYLR400W MES1P00958 751 aaKnown RBP3.15□□□□□ -1.91
YLR400WYLR400W ADE4P04046 510 aaKnown RBP3.15□□□□□ -1.91
YLR400WYLR400W RHB1P25378 209 aa3.15□□□□□ -1.91
YLR400WYLR400W UTR4P32626 227 aa3.15□□□□□ -1.91
YLR400WYLR400W SPC34P36131 295 aa3.15□□□□□ -1.91
YLR400WYLR400W FMP46P36141 133 aaKnown RBP3.15□□□□□ -1.91
YLR400WYLR400W STV1P37296 890 aa3.15□□□□□ -1.91
YLR400WYLR400W PFF1P38244 976 aa3.15□□□□□ -1.91
YLR400WYLR400W MMS4P38257 691 aa3.15□□□□□ -1.91
YLR400WYLR400W PCL6P40038 420 aa3.15□□□□□ -1.91
YLR400WYLR400W YTA12P40341 825 aa3.15□□□□□ -1.91
YLR400WYLR400W YJR011CP47086 261 aaPredicted RBP3.15□□□□□ -1.91
YLR400WYLR400W BET4Q00618 327 aa3.15□□□□□ -1.91
YLR400WYLR400W EKI1Q03764 534 aa3.15□□□□□ -1.91
YLR400WYLR400W RKM5Q12367 367 aa3.15□□□□□ -1.91
YLR400WYLR400W SFG1Q12507 346 aa3.15□□□□□ -1.91
YLR400WYLR400W YLR278CQ05854 1341 aa3.15□□□□□ -1.91
YLR400WYLR400W RPL6BP05739 176 aaKnown RBP3.14□□□□□ -1.91
YLR400WYLR400W SRV2P17555 526 aaKnown RBP3.14□□□□□ -1.91
YLR400WYLR400W GLK1P17709 500 aaKnown RBP3.14□□□□□ -1.91
YLR400WYLR400W GID7P25569 745 aa3.14□□□□□ -1.91
YLR400WYLR400W FAA1P30624 700 aaKnown RBP3.14□□□□□ -1.91
YLR400WYLR400W SOR1P35497 357 aaKnown RBP3.14□□□□□ -1.91
YLR400WYLR400W EFM2P38347 419 aa3.14□□□□□ -1.91
YLR400WYLR400W WSS1P38838 269 aa3.14□□□□□ -1.91
YLR400WYLR400W STN1P38960 494 aa3.14□□□□□ -1.91
YLR400WYLR400W YER130CP39959 443 aa3.14□□□□□ -1.91
YLR400WYLR400W FAU1P40099 211 aa3.14□□□□□ -1.91
YLR400WYLR400W SAD1P43589 448 aa3.14□□□□□ -1.91
YLR400WYLR400W VPS25P47142 202 aa3.14□□□□□ -1.91
YLR400WYLR400W EFM3P47163 339 aa3.14□□□□□ -1.91
YLR400WYLR400W YNR068CP53754 272 aa3.14□□□□□ -1.91
YLR400WYLR400W NCS2P53923 493 aaPredicted RBP3.14□□□□□ -1.91
YLR400WYLR400W RPL6AQ02326 176 aaKnown RBP3.14□□□□□ -1.91
YLR400WYLR400W UTP6Q02354 440 aaKnown RBP3.14□□□□□ -1.91
YLR400WYLR400W CTL1Q03220 320 aaKnown RBP3.14□□□□□ -1.91
YLR400WYLR400W SLD5Q03406 294 aa3.14□□□□□ -1.91
YLR400WYLR400W MGR3Q04472 501 aa3.14□□□□□ -1.91
YLR400WYLR400W BNA5Q05979 453 aa3.14□□□□□ -1.91
YLR400WYLR400W PHO92Q06390 306 aa3.14□□□□□ -1.91
YLR400WYLR400W SSK1Q07084 712 aa3.14□□□□□ -1.91
YLR400WYLR400W YFH1Q07540 174 aa3.14□□□□□ -1.91
YLR400WYLR400W SOR2Q07786 357 aa3.14□□□□□ -1.91
YLR400WYLR400W STF1P01098 86 aa3.13□□□□□ -1.91
YLR400WYLR400W PMR1P13586 950 aa3.13□□□□□ -1.91
YLR400WYLR400W NOP1P15646 327 aaKnown RBP3.13□□□□□ -1.91
YLR400WYLR400W ALG1P16661 449 aa3.13□□□□□ -1.91
YLR400WYLR400W UBA1P22515 1024 aaKnown RBP3.13□□□□□ -1.91
YLR400WYLR400W YCR007CP25354 239 aa3.13□□□□□ -1.91
YLR400WYLR400W CRM1P30822 1084 aaKnown RBP3.13□□□□□ -1.91
YLR400WYLR400W RAD24P32641 659 aa3.13□□□□□ -1.91
YLR400WYLR400W GDT1P38301 280 aaPredicted RBP3.13□□□□□ -1.91
YLR400WYLR400W GPI16P38875 610 aa3.13□□□□□ -1.91
YLR400WYLR400W YPS6P40583 537 aa3.13□□□□□ -1.91
YLR400WYLR400W EPL1P43572 832 aa3.13□□□□□ -1.91
YLR400WYLR400W PHO86P46956 311 aa3.13□□□□□ -1.91
YLR400WYLR400W YNL143CP53908 130 aa3.13□□□□□ -1.91
YLR400WYLR400W HSP31Q04432 237 aa3.13□□□□□ -1.91
YLR400WYLR400W SNT309Q06091 175 aaPredicted RBP3.13□□□□□ -1.91
YLR400WYLR400W RRP9Q06506 573 aaKnown RBP3.13□□□□□ -1.91
YLR400WYLR400W THI20Q08224 551 aa3.13□□□□□ -1.91
YLR400WYLR400W BSC1Q12140 328 aa3.13□□□□□ -1.91
YLR400WYLR400W TFB5Q3E7C1 72 aaPredicted RBP3.13□□□□□ -1.91
YLR400WYLR400W AMD1P15274 810 aaKnown RBP3.12□□□□□ -1.91
YLR400WYLR400W CDC23P16522 626 aa3.12□□□□□ -1.91
YLR400WYLR400W BUB3P26449 341 aa3.12□□□□□ -1.91
YLR400WYLR400W RIM1P32445 135 aaKnown RBP3.12□□□□□ -1.91
YLR400WYLR400W SUR1P33300 382 aa3.12□□□□□ -1.91
YLR400WYLR400W PHD1P36093 366 aa3.12□□□□□ -1.91
YLR400WYLR400W YPK3P38070 525 aa3.12□□□□□ -1.91
YLR400WYLR400W PCH2P38126 564 aa3.12□□□□□ -1.91
YLR400WYLR400W RTS2P40962 232 aa3.12□□□□□ -1.91
YLR400WYLR400W POP1P41812 875 aa3.12□□□□□ -1.91
YLR400WYLR400W ELP2P42935 788 aa3.12□□□□□ -1.91
YLR400WYLR400W SCD6P45978 349 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
YLR400WYLR400W GUF1P46943 645 aa3.12□□□□□ -1.91
YLR400WYLR400W TRS85P46944 698 aa3.12□□□□□ -1.91
YLR400WYLR400W MPP10P47083 593 aaKnown RBP3.12□□□□□ -1.91
YLR400WYLR400W CUE3P53137 624 aaKnown RBP3.12□□□□□ -1.91
YLR400WYLR400W GPI1P53306 609 aa3.12□□□□□ -1.91
YLR400WYLR400W PRP3Q03338 469 aaPredicted RBP3.12□□□□□ -1.91
YLR400WYLR400W IZH1Q03419 316 aa3.12□□□□□ -1.91
YLR400WYLR400W YMR087WQ04299 284 aa3.12□□□□□ -1.91
YLR400WYLR400W FMP42Q04991 504 aa3.12□□□□□ -1.91
YLR400WYLR400W RTT103Q05543 409 aa3.12□□□□□ -1.91
YLR400WYLR400W YLR281CQ05863 155 aa3.12□□□□□ -1.91
YLR400WYLR400W YDR061WQ12298 539 aa3.12□□□□□ -1.91
YLR400WYLR400W LEU4P06208 619 aaKnown RBP3.11□□□□□ -1.91
YLR400WYLR400W TAL1P15019 335 aaKnown RBP3.11□□□□□ -1.91
YLR400WYLR400W CTR86P25355 563 aa3.11□□□□□ -1.91
YLR400WYLR400W PDR3P33200 976 aa3.11□□□□□ -1.91
YLR400WYLR400W RRN10P38204 145 aa3.11□□□□□ -1.91
YLR400WYLR400W OLA1P38219 394 aaKnown RBP3.11□□□□□ -1.91
YLR400WYLR400W STP2P38704 541 aa3.11□□□□□ -1.91
YLR400WYLR400W RRP4P38792 359 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms