RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C CAT2P32796 670 aaKnown RBP9.97□□□□□ -0.81
SHM2YLR058C PRM10P42946 383 aa9.97□□□□□ -0.81
SHM2YLR058C GET1P53192 235 aa9.97□□□□□ -0.81
SHM2YLR058C RTS3P53289 263 aa9.97□□□□□ -0.81
SHM2YLR058C ATP25Q03153 612 aa9.97□□□□□ -0.81
SHM2YLR058C STP3Q05937 343 aa9.97□□□□□ -0.81
SHM2YLR058C PDR8Q06149 701 aa9.97□□□□□ -0.81
SHM2YLR058C YPR064WQ12492 139 aa9.97□□□□□ -0.81
SHM2YLR058C SEN1Q00416 2231 aaKnown RBP9.97□□□□□ -0.81
SHM2YLR058C ACC1Q00955 2233 aaKnown RBP9.96□□□□□ -0.81
SHM2YLR058C RPS17AP02407 136 aaKnown RBP9.96□□□□□ -0.82
SHM2YLR058C RPS17BP14127 136 aaKnown RBP9.96□□□□□ -0.82
SHM2YLR058C RVS161P25343 265 aaKnown RBP9.96□□□□□ -0.82
SHM2YLR058C DPH5P32469 300 aaPredicted RBP9.96□□□□□ -0.82
SHM2YLR058C ERG1P32476 496 aaKnown RBP9.96□□□□□ -0.82
SHM2YLR058C NGG1P32494 702 aa9.96□□□□□ -0.82
SHM2YLR058C ASC1P38011 319 aaKnown RBP9.96□□□□□ -0.82
SHM2YLR058C EHT1P38295 451 aa9.96□□□□□ -0.82
SHM2YLR058C TDP1P38319 544 aa9.96□□□□□ -0.82
SHM2YLR058C DIM1P41819 318 aaKnown RBP9.96□□□□□ -0.82
SHM2YLR058C NOP9P47077 666 aaKnown RBP9.96□□□□□ -0.82
SHM2YLR058C KEL2P50090 882 aa9.96□□□□□ -0.82
SHM2YLR058C ESF2P53743 316 aaKnown RBP9.96□□□□□ -0.82
SHM2YLR058C SPC2Q04969 178 aa9.96□□□□□ -0.82
SHM2YLR058C YLL007CQ07799 665 aa9.96□□□□□ -0.82
SHM2YLR058C ALG7P07286 448 aa9.95□□□□□ -0.82
SHM2YLR058C SIN4P32259 974 aa9.95□□□□□ -0.82
SHM2YLR058C PEX6P33760 1030 aa9.95□□□□□ -0.82
SHM2YLR058C MRP8P35719 219 aa9.95□□□□□ -0.82
SHM2YLR058C PDX3P38075 228 aaKnown RBP9.95□□□□□ -0.82
SHM2YLR058C YHR112CP38716 378 aa9.95□□□□□ -0.82
SHM2YLR058C ILM1P47155 203 aa9.95□□□□□ -0.82
SHM2YLR058C ERP6P53198 216 aa9.95□□□□□ -0.82
SHM2YLR058C GPI1P53306 609 aa9.95□□□□□ -0.82
SHM2YLR058C YPL071CQ02864 156 aa9.95□□□□□ -0.82
SHM2YLR058C NAN1Q02931 896 aaKnown RBP9.95□□□□□ -0.82
SHM2YLR058C GMC2Q06201 188 aa9.95□□□□□ -0.82
SHM2YLR058C TY4B-PA0A0B7P3V8 1104 aa9.94□□□□□ -0.82
SHM2YLR058C MSS18P08593 268 aa9.94□□□□□ -0.82
SHM2YLR058C PRO1P32264 428 aa9.94□□□□□ -0.82
SHM2YLR058C BEM4P39011 633 aa9.94□□□□□ -0.82
SHM2YLR058C ECM1P39715 212 aa9.94□□□□□ -0.82
SHM2YLR058C PMT4P46971 762 aa9.94□□□□□ -0.82
SHM2YLR058C YGR250CP53316 781 aaKnown RBP9.94□□□□□ -0.82
SHM2YLR058C BNI4P53858 892 aa9.94□□□□□ -0.82
SHM2YLR058C IRC13Q08630 104 aa9.94□□□□□ -0.82
SHM2YLR058C BNA4P38169 460 aa9.93□□□□□ -0.82
SHM2YLR058C DSS1P39112 969 aa9.93□□□□□ -0.82
SHM2YLR058C MTW1P39731 289 aa9.93□□□□□ -0.82
SHM2YLR058C ECM10P39987 644 aa9.93□□□□□ -0.82
SHM2YLR058C PAC11P40960 533 aa9.93□□□□□ -0.82
SHM2YLR058C RAD17P48581 401 aa9.93□□□□□ -0.82
SHM2YLR058C ROG1P53118 685 aa9.93□□□□□ -0.82
SHM2YLR058C COS6P53344 381 aa9.93□□□□□ -0.82
SHM2YLR058C MSC1Q03104 513 aa9.93□□□□□ -0.82
SHM2YLR058C HFD1Q04458 532 aa9.93□□□□□ -0.82
SHM2YLR058C GAD1Q04792 585 aa9.93□□□□□ -0.82
SHM2YLR058C RRP45Q05636 305 aaKnown RBP9.93□□□□□ -0.82
SHM2YLR058C SSQ1Q05931 657 aaPredicted RBP9.93□□□□□ -0.82
SHM2YLR058C XYL2Q07993 356 aa9.93□□□□□ -0.82
SHM2YLR058C STE7P06784 515 aa9.92□□□□□ -0.82
SHM2YLR058C DAP2P18962 818 aa9.92□□□□□ -0.82
SHM2YLR058C YAP1P19880 650 aaKnown RBP9.92□□□□□ -0.82
SHM2YLR058C HOP1P20050 605 aa9.92□□□□□ -0.82
SHM2YLR058C PRP2P20095 876 aaPredicted RBP9.92□□□□□ -0.82
SHM2YLR058C HOG1P32485 435 aa9.92□□□□□ -0.82
SHM2YLR058C MNN2P38069 597 aa9.92□□□□□ -0.82
SHM2YLR058C YHR218WP38899 603 aa9.92□□□□□ -0.82
SHM2YLR058C NEO1P40527 1151 aa9.92□□□□□ -0.82
SHM2YLR058C PSA1P41940 361 aaKnown RBP9.92□□□□□ -0.82
SHM2YLR058C MDJ2P42834 146 aa9.92□□□□□ -0.82
SHM2YLR058C SVL3Q03088 825 aaKnown RBP9.92□□□□□ -0.82
SHM2YLR058C HMO1Q03973 246 aaKnown RBP9.92□□□□□ -0.82
SHM2YLR058C BOP2Q06150 570 aa9.92□□□□□ -0.82
SHM2YLR058C PUN1Q06991 263 aa9.92□□□□□ -0.82
SHM2YLR058C PUS9Q12069 462 aa9.92□□□□□ -0.82
SHM2YLR058C LEU9Q12166 604 aaKnown RBP9.92□□□□□ -0.82
SHM2YLR058C PNO1Q99216 274 aaKnown RBP9.92□□□□□ -0.82
SHM2YLR058C CBP2P03874 630 aaPredicted RBP9.91□□□□□ -0.82
SHM2YLR058C STP2P38704 541 aa9.91□□□□□ -0.82
SHM2YLR058C MNL1P38888 796 aa9.91□□□□□ -0.82
SHM2YLR058C CFD1P40558 293 aa9.91□□□□□ -0.82
SHM2YLR058C YIL001WP40560 513 aa9.91□□□□□ -0.82
SHM2YLR058C YJL043WP47053 257 aa9.91□□□□□ -0.82
SHM2YLR058C RIM21P48565 533 aa9.91□□□□□ -0.82
SHM2YLR058C RRN11Q04712 507 aa9.91□□□□□ -0.82
SHM2YLR058C COS7Q07788 383 aa9.91□□□□□ -0.82
SHM2YLR058C MMT2Q08970 484 aa9.91□□□□□ -0.82
SHM2YLR058C ULA1Q12059 462 aa9.91□□□□□ -0.82
SHM2YLR058C BCY1P07278 416 aaKnown RBP9.9□□□□□ -0.82
SHM2YLR058C MGR1P25573 417 aa9.9□□□□□ -0.82
SHM2YLR058C SSO1P32867 290 aa9.9□□□□□ -0.82
SHM2YLR058C SKG1P36169 355 aa9.9□□□□□ -0.82
SHM2YLR058C FAA2P39518 744 aa9.9□□□□□ -0.82
SHM2YLR058C YGR016WP53209 190 aa9.9□□□□□ -0.82
SHM2YLR058C APC4Q04601 652 aa9.9□□□□□ -0.82
SHM2YLR058C MFG1Q07684 458 aa9.9□□□□□ -0.82
SHM2YLR058C PIN2Q12057 282 aa9.9□□□□□ -0.82
SHM2YLR058C NSI1Q12457 570 aa9.9□□□□□ -0.82
SHM2YLR058C SKM1Q12469 655 aa9.9□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms