RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W ROX1P25042 368 aa3.71□□□□□ -1.82
SSL1YLR005W RRP43P25359 394 aaPredicted RBP3.71□□□□□ -1.82
SSL1YLR005W YCR099CP25657 155 aa3.71□□□□□ -1.82
SSL1YLR005W URA10P30402 227 aa3.71□□□□□ -1.82
SSL1YLR005W ATP11P32453 318 aa3.71□□□□□ -1.82
SSL1YLR005W ORC2P32833 620 aa3.71□□□□□ -1.82
SSL1YLR005W UGP1P32861 499 aaKnown RBP3.71□□□□□ -1.82
SSL1YLR005W SEF1P34228 1148 aa3.71□□□□□ -1.82
SSL1YLR005W YKL100CP34248 587 aa3.71□□□□□ -1.82
SSL1YLR005W RRP1P35178 278 aaPredicted RBP3.71□□□□□ -1.82
SSL1YLR005W EHT1P38295 451 aa3.71□□□□□ -1.82
SSL1YLR005W TDP1P38319 544 aa3.71□□□□□ -1.82
SSL1YLR005W MSG5P38590 489 aa3.71□□□□□ -1.82
SSL1YLR005W YHR127WP38833 243 aaKnown RBP3.71□□□□□ -1.82
SSL1YLR005W YHR210CP38893 341 aa3.71□□□□□ -1.82
SSL1YLR005W AXL2P38928 823 aa3.71□□□□□ -1.82
SSL1YLR005W YEN1P40028 759 aa3.71□□□□□ -1.82
SSL1YLR005W ATF1P40353 525 aa3.71□□□□□ -1.82
SSL1YLR005W HOS4P40480 1083 aa3.71□□□□□ -1.82
SSL1YLR005W YJR030CP47101 745 aa3.71□□□□□ -1.82
SSL1YLR005W HOC1P47124 396 aa3.71□□□□□ -1.82
SSL1YLR005W MPS2P53159 387 aa3.71□□□□□ -1.82
SSL1YLR005W EAF7P53911 425 aaKnown RBP3.71□□□□□ -1.82
SSL1YLR005W SED5Q01590 340 aa3.71□□□□□ -1.82
SSL1YLR005W ATP25Q03153 612 aa3.71□□□□□ -1.82
SSL1YLR005W YET2Q04210 160 aa3.71□□□□□ -1.82
SSL1YLR005W ENT2Q05785 613 aa3.71□□□□□ -1.82
SSL1YLR005W MDM30Q05930 598 aa3.71□□□□□ -1.82
SSL1YLR005W YDR056CQ12025 205 aa3.71□□□□□ -1.82
SSL1YLR005W AIM41Q12032 185 aa3.71□□□□□ -1.82
SSL1YLR005W YOR114WQ12219 294 aa3.71□□□□□ -1.82
SSL1YLR005W NOP14Q99207 810 aaKnown RBP3.71□□□□□ -1.82
SSL1YLR005W COX1P00401 534 aa3.7□□□□□ -1.82
SSL1YLR005W FUM1P08417 488 aaKnown RBP3.7□□□□□ -1.82
SSL1YLR005W PEP5P12868 1029 aa3.7□□□□□ -1.82
SSL1YLR005W NSP1P14907 823 aaKnown RBP3.7□□□□□ -1.82
SSL1YLR005W ADE1P27616 306 aa3.7□□□□□ -1.82
SSL1YLR005W YJU2P28320 278 aaPredicted RBP3.7□□□□□ -1.82
SSL1YLR005W MEI5P32489 222 aa3.7□□□□□ -1.82
SSL1YLR005W NRP1P32770 719 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SSL1YLR005W HAT2P39984 401 aa3.7□□□□□ -1.82
SSL1YLR005W GID8P40208 455 aa3.7□□□□□ -1.82
SSL1YLR005W NDE1P40215 560 aa3.7□□□□□ -1.82
SSL1YLR005W YFR020WP43600 232 aa3.7□□□□□ -1.82
SSL1YLR005W MAL11P53048 616 aa3.7□□□□□ -1.82
SSL1YLR005W SGF73P53165 657 aa3.7□□□□□ -1.82
SSL1YLR005W MRS2Q01926 470 aa3.7□□□□□ -1.82
SSL1YLR005W YMR114CQ04471 368 aaKnown RBP3.7□□□□□ -1.82
SSL1YLR005W TDA9Q04545 1251 aa3.7□□□□□ -1.82
SSL1YLR005W BCH1Q05029 724 aa3.7□□□□□ -1.82
SSL1YLR005W YMR034CQ05131 434 aaPredicted RBP3.7□□□□□ -1.82
SSL1YLR005W NUS1Q12063 375 aa3.7□□□□□ -1.82
SSL1YLR005W RMD5Q12508 421 aa3.7□□□□□ -1.82
SSL1YLR005W CDC9P04819 755 aa3.69□□□□□ -1.82
SSL1YLR005W YML002WP0CF17 737 aa3.69□□□□□ -1.82
SSL1YLR005W PRP16P15938 1071 aaPredicted RBP3.69□□□□□ -1.82
SSL1YLR005W MEF1P25039 761 aa3.69□□□□□ -1.82
SSL1YLR005W ADH7P25377 361 aa3.69□□□□□ -1.82
SSL1YLR005W YCR102CP25608 368 aa3.69□□□□□ -1.82
SSL1YLR005W CPR3P25719 182 aa3.69□□□□□ -1.82
SSL1YLR005W RIM1P32445 135 aaKnown RBP3.69□□□□□ -1.82
SSL1YLR005W CAJ1P39101 391 aa3.69□□□□□ -1.82
SSL1YLR005W DSS1P39112 969 aa3.69□□□□□ -1.82
SSL1YLR005W SER3P40054 469 aa3.69□□□□□ -1.82
SSL1YLR005W SEC28P40509 296 aaKnown RBP3.69□□□□□ -1.82
SSL1YLR005W IBA57P47158 497 aa3.69□□□□□ -1.82
SSL1YLR005W YJR149WP47177 404 aa3.69□□□□□ -1.82
SSL1YLR005W TEX1P53851 422 aaKnown RBP3.69□□□□□ -1.82
SSL1YLR005W PRP38Q00723 242 aaPredicted RBP3.69□□□□□ -1.82
SSL1YLR005W YDR338CQ05497 695 aa3.69□□□□□ -1.82
SSL1YLR005W CDC123Q05791 360 aa3.69□□□□□ -1.82
SSL1YLR005W CUE5Q08412 411 aaKnown RBP3.69□□□□□ -1.82
SSL1YLR005W SLD7Q08457 257 aa3.69□□□□□ -1.82
SSL1YLR005W AKR2Q12013 749 aa3.69□□□□□ -1.82
SSL1YLR005W HUA2Q12134 243 aa3.69□□□□□ -1.82
SSL1YLR005W RRP42Q12277 265 aaPredicted RBP3.69□□□□□ -1.82
SSL1YLR005W YLR111WQ12528 110 aa3.69□□□□□ -1.82
SSL1YLR005W GPA2P10823 449 aa3.68□□□□□ -1.82
SSL1YLR005W MGT1P26188 188 aa3.68□□□□□ -1.82
SSL1YLR005W CMK1P27466 446 aaKnown RBP3.68□□□□□ -1.82
SSL1YLR005W PMT2P31382 759 aa3.68□□□□□ -1.82
SSL1YLR005W SSH4P32343 579 aa3.68□□□□□ -1.82
SSL1YLR005W ATO2P32907 282 aa3.68□□□□□ -1.82
SSL1YLR005W STO1P34160 861 aaKnown RBP3.68□□□□□ -1.82
SSL1YLR005W CUE2P36075 443 aaKnown RBP3.68□□□□□ -1.82
SSL1YLR005W CAB3P36076 571 aa3.68□□□□□ -1.82
SSL1YLR005W VHC1P38329 1120 aa3.68□□□□□ -1.82
SSL1YLR005W SIC1P38634 284 aa3.68□□□□□ -1.82
SSL1YLR005W MNL1P38888 796 aa3.68□□□□□ -1.82
SSL1YLR005W MNT3P40549 630 aa3.68□□□□□ -1.82
SSL1YLR005W GAT1P43574 510 aa3.68□□□□□ -1.82
SSL1YLR005W ATG36P46983 293 aa3.68□□□□□ -1.82
SSL1YLR005W JHD2P47156 728 aaPredicted RBP3.68□□□□□ -1.82
SSL1YLR005W UBC11P52492 156 aa3.68□□□□□ -1.82
SSL1YLR005W TEL2P53038 688 aa3.68□□□□□ -1.82
SSL1YLR005W MDM34P53083 459 aa3.68□□□□□ -1.82
SSL1YLR005W VPS73P53142 486 aaKnown RBP3.68□□□□□ -1.82
SSL1YLR005W YGR015CP53208 328 aa3.68□□□□□ -1.82
SSL1YLR005W CWC22P53333 577 aaKnown RBP3.68□□□□□ -1.82
SSL1YLR005W ERG13P54839 491 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms