RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C SPR28Q04921 423 aa3.97□□□□□ -1.77
PXR1YGR280C YPR174CQ06616 221 aaPredicted RBP3.97□□□□□ -1.77
PXR1YGR280C PSY3Q12318 242 aa3.97□□□□□ -1.77
PXR1YGR280C FOL3Q12676 427 aaPredicted RBP3.97□□□□□ -1.77
PXR1YGR280C MDM12Q92328 271 aa3.97□□□□□ -1.77
PXR1YGR280C PHO5P00635 467 aa3.96□□□□□ -1.78
PXR1YGR280C LEU4P06208 619 aaKnown RBP3.96□□□□□ -1.78
PXR1YGR280C HTS1P07263 546 aaKnown RBP3.96□□□□□ -1.78
PXR1YGR280C GAL3P13045 520 aa3.96□□□□□ -1.78
PXR1YGR280C NSP1P14907 823 aaKnown RBP3.96□□□□□ -1.78
PXR1YGR280C YCR099CP25657 155 aa3.96□□□□□ -1.78
PXR1YGR280C MF(ALPHA)2P32435 120 aa3.96□□□□□ -1.78
PXR1YGR280C ERG1P32476 496 aaKnown RBP3.96□□□□□ -1.78
PXR1YGR280C MAE1P36013 669 aaKnown RBP3.96□□□□□ -1.78
PXR1YGR280C GLG1P36143 616 aa3.96□□□□□ -1.78
PXR1YGR280C JNM1P36224 373 aa3.96□□□□□ -1.78
PXR1YGR280C PTH1P38876 190 aaKnown RBP3.96□□□□□ -1.78
PXR1YGR280C PMC1P38929 1173 aaPredicted RBP3.96□□□□□ -1.78
PXR1YGR280C RVS167P39743 482 aaKnown RBP3.96□□□□□ -1.78
PXR1YGR280C AZF1P41696 914 aa3.96□□□□□ -1.78
PXR1YGR280C PXA1P41909 870 aa3.96□□□□□ -1.78
PXR1YGR280C KAP114P53067 1004 aa3.96□□□□□ -1.78
PXR1YGR280C THI7Q05998 598 aa3.96□□□□□ -1.78
PXR1YGR280C ESA1Q08649 445 aa3.96□□□□□ -1.78
PXR1YGR280C TY1A-NL1Q12391 440 aaKnown RBP3.96□□□□□ -1.78
PXR1YGR280C SRN2Q99176 213 aa3.96□□□□□ -1.78
PXR1YGR280C HEM4P06174 275 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-LR4P0C2I8 440 aaKnown RBP3.95□□□□□ -1.78
PXR1YGR280C TY1A-DR6P0CX70 440 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-ER1P0CX71 440 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-LR2P0CX72 440 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-PLP0CX73 440 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-JR1P0CX74 440 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-LR3P0CX75 440 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-ML2P0CX76 440 aa3.95□□□□□ -1.78
PXR1YGR280C DAP2P18962 818 aa3.95□□□□□ -1.78
PXR1YGR280C DBF20P32328 564 aa3.95□□□□□ -1.78
PXR1YGR280C BEM3P32873 1128 aa3.95□□□□□ -1.78
PXR1YGR280C MRP21P38175 177 aa3.95□□□□□ -1.78
PXR1YGR280C HSM3P38348 480 aa3.95□□□□□ -1.78
PXR1YGR280C MMM1P41800 426 aa3.95□□□□□ -1.78
PXR1YGR280C YJR149WP47177 404 aa3.95□□□□□ -1.78
PXR1YGR280C RNR4P49723 345 aaKnown RBP3.95□□□□□ -1.78
PXR1YGR280C ARI1P53111 347 aaKnown RBP3.95□□□□□ -1.78
PXR1YGR280C ROG1P53118 685 aa3.95□□□□□ -1.78
PXR1YGR280C YGR015CP53208 328 aa3.95□□□□□ -1.78
PXR1YGR280C SOV1Q04748 898 aa3.95□□□□□ -1.78
PXR1YGR280C HRI1Q05905 244 aaKnown RBP3.95□□□□□ -1.78
PXR1YGR280C YLR446WQ06204 433 aa3.95□□□□□ -1.78
PXR1YGR280C YIG1Q08956 461 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-GR1Q12085 440 aa3.95□□□□□ -1.78
PXR1YGR280C PST1Q12355 444 aa3.95□□□□□ -1.78
PXR1YGR280C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.95□□□□□ -1.78
PXR1YGR280C TY1A-OLQ92392 440 aaKnown RBP3.95□□□□□ -1.78
PXR1YGR280C RNA1P11745 407 aaKnown RBP3.94□□□□□ -1.78
PXR1YGR280C DBF4P32325 704 aa3.94□□□□□ -1.78
PXR1YGR280C RRP1P35178 278 aaPredicted RBP3.94□□□□□ -1.78
PXR1YGR280C TSL1P38427 1098 aaKnown RBP3.94□□□□□ -1.78
PXR1YGR280C SOK1P40317 901 aa3.94□□□□□ -1.78
PXR1YGR280C NDC80P40460 691 aa3.94□□□□□ -1.78
PXR1YGR280C AVT7P40501 490 aa3.94□□□□□ -1.78
PXR1YGR280C GUS1P46655 708 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
PXR1YGR280C NMD5P46970 1048 aa3.94□□□□□ -1.78
PXR1YGR280C MRL1Q06815 381 aa3.94□□□□□ -1.78
PXR1YGR280C MED7Q08278 222 aa3.94□□□□□ -1.78
PXR1YGR280C RRP40Q08285 240 aaKnown RBP3.94□□□□□ -1.78
PXR1YGR280C ALG6Q12001 544 aaKnown RBP3.94□□□□□ -1.78
PXR1YGR280C HOS1Q12214 470 aa3.94□□□□□ -1.78
PXR1YGR280C CDC21P06785 304 aa3.93□□□□□ -1.78
PXR1YGR280C APN1P22936 367 aa3.93□□□□□ -1.78
PXR1YGR280C STP22P25604 385 aa3.93□□□□□ -1.78
PXR1YGR280C SPC29P33419 253 aa3.93□□□□□ -1.78
PXR1YGR280C TOM20P35180 183 aa3.93□□□□□ -1.78
PXR1YGR280C YET1P35723 206 aa3.93□□□□□ -1.78
PXR1YGR280C KKQ8P36004 724 aa3.93□□□□□ -1.78
PXR1YGR280C YKL077WP36081 392 aa3.93□□□□□ -1.78
PXR1YGR280C ADE17P38009 592 aaKnown RBP3.93□□□□□ -1.78
PXR1YGR280C ASC1P38011 319 aaKnown RBP3.93□□□□□ -1.78
PXR1YGR280C ARL1P38116 183 aaKnown RBP3.93□□□□□ -1.78
PXR1YGR280C PSY4P38193 441 aa3.93□□□□□ -1.78
PXR1YGR280C YBR071WP38243 211 aa3.93□□□□□ -1.78
PXR1YGR280C YHL037CP38733 133 aa3.93□□□□□ -1.78
PXR1YGR280C SHU2P38957 223 aa3.93□□□□□ -1.78
PXR1YGR280C GGC1P38988 300 aa3.93□□□□□ -1.78
PXR1YGR280C APQ12P40532 138 aa3.93□□□□□ -1.78
PXR1YGR280C ALY2P47029 1046 aa3.93□□□□□ -1.78
PXR1YGR280C YJL043WP47053 257 aa3.93□□□□□ -1.78
PXR1YGR280C LSM3P57743 89 aaKnown RBP3.93□□□□□ -1.78
PXR1YGR280C GAS3Q03655 524 aa3.93□□□□□ -1.78
PXR1YGR280C YOS9Q99220 542 aa3.93□□□□□ -1.78
PXR1YGR280C YER145C-AA0A023PYF4 145 aa3.92□□□□□ -1.78
PXR1YGR280C CBP6P07253 162 aaPredicted RBP3.92□□□□□ -1.78
PXR1YGR280C ERG20P08524 352 aaKnown RBP3.92□□□□□ -1.78
PXR1YGR280C RPS21AP0C0V8 87 aaKnown RBP3.92□□□□□ -1.78
PXR1YGR280C RSR1P13856 272 aa3.92□□□□□ -1.78
PXR1YGR280C NCP1P16603 691 aaKnown RBP3.92□□□□□ -1.78
PXR1YGR280C CDC5P32562 705 aa3.92□□□□□ -1.78
PXR1YGR280C KES1P35844 434 aaKnown RBP3.92□□□□□ -1.78
PXR1YGR280C TPO5P36029 618 aa3.92□□□□□ -1.78
PXR1YGR280C CKB2P38930 258 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms