RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR78, Length 87 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR78	snR78	WBP1	P33767	430 aa	Known RBP	4.28	□□□□□ -1.72
snR78	snR78	CBP4	P37267	147 aa		4.28	□□□□□ -1.72
snR78	snR78	MUM2	P38236	366 aa		4.28	□□□□□ -1.72
snR78	snR78	SAM1	P10659	382 aa	Known RBP	4.27	□□□□□ -1.73
snR78	snR78	PET123	P17558	318 aa		4.27	□□□□□ -1.73
snR78	snR78	SAM2	P19358	384 aa	Known RBP	4.27	□□□□□ -1.73
snR78	snR78	CDC60	P26637	1090 aa	Known RBP	4.27	□□□□□ -1.73
snR78	snR78	MIX23	P38162	196 aa		4.27	□□□□□ -1.73
snR78	snR78	MFB1	Q04922	465 aa		4.27	□□□□□ -1.73
snR78	snR78	ENT1	Q12518	454 aa		4.27	□□□□□ -1.73
snR78	snR78	NAT1	P12945	854 aa	Known RBP	4.26	□□□□□ -1.73
snR78	snR78	PAH1	P32567	862 aa		4.26	□□□□□ -1.73
snR78	snR78	STB6	P36085	766 aa		4.26	□□□□□ -1.73
snR78	snR78	OST1	P41543	476 aa	Known RBP	4.26	□□□□□ -1.73
snR78	snR78	OCA1	P50946	238 aa	Predicted RBP	4.26	□□□□□ -1.73
snR78	snR78	PNG1	Q02890	363 aa		4.26	□□□□□ -1.73
snR78	snR78	HRI1	Q05905	244 aa	Known RBP	4.26	□□□□□ -1.73
snR78	snR78	CTI6	Q08923	506 aa		4.26	□□□□□ -1.73
snR78	snR78	SEM1	O94742	89 aa		4.25	□□□□□ -1.73
snR78	snR78	CBS1	P14066	229 aa		4.25	□□□□□ -1.73
snR78	snR78	NOP4	P37838	685 aa	Known RBP	4.25	□□□□□ -1.73
snR78	snR78	KEL1	P38853	1164 aa	Known RBP	4.25	□□□□□ -1.73
snR78	snR78	SLG1	P54867	378 aa		4.25	□□□□□ -1.73
snR78	snR78	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
snR78	snR78	RPL31B	P0C2H9	113 aa	Known RBP	4.24	□□□□□ -1.73
snR78	snR78	NCA3	P46955	337 aa		4.24	□□□□□ -1.73
snR78	snR78	MRX6	P48564	524 aa		4.24	□□□□□ -1.73
snR78	snR78	SHY1	P53266	389 aa		4.24	□□□□□ -1.73
snR78	snR78	YMR027W	Q04371	470 aa		4.24	□□□□□ -1.73
snR78	snR78	MUM3	Q08750	479 aa		4.24	□□□□□ -1.73
snR78	snR78	DAL2	P25335	343 aa		4.23	□□□□□ -1.73
snR78	snR78	SPS22	P25380	463 aa		4.23	□□□□□ -1.73
snR78	snR78	PRM5	P40476	318 aa		4.23	□□□□□ -1.73
snR78	snR78	SOV1	Q04748	898 aa		4.23	□□□□□ -1.73
snR78	snR78	YDL007C-A	Q2V2Q0	85 aa		4.23	□□□□□ -1.73
snR78	snR78	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
snR78	snR78	NOP16	P40007	231 aa	Known RBP	4.22	□□□□□ -1.73
snR78	snR78	PAN6	P40459	309 aa		4.22	□□□□□ -1.73
snR78	snR78	TMA108	P40462	946 aa		4.22	□□□□□ -1.73
snR78	snR78	TRS85	P46944	698 aa		4.22	□□□□□ -1.73
snR78	snR78	MRP51	Q02950	344 aa		4.22	□□□□□ -1.73
snR78	snR78	WTM1	Q12363	437 aa	Known RBP	4.22	□□□□□ -1.73
snR78	snR78	LSB5	P25369	354 aa		4.21	□□□□□ -1.74
snR78	snR78	MRE11	P32829	692 aa		4.21	□□□□□ -1.74
snR78	snR78	RIB5	P38145	238 aa		4.21	□□□□□ -1.74
snR78	snR78	YMR147W	P40218	223 aa	Known RBP	4.21	□□□□□ -1.74
snR78	snR78	DOT5	P40553	215 aa		4.21	□□□□□ -1.74
snR78	snR78	PET130	P47065	347 aa		4.21	□□□□□ -1.74
snR78	snR78	PDS5	Q04264	1277 aa		4.21	□□□□□ -1.74
snR78	snR78	FOB1	O13329	566 aa		4.2	□□□□□ -1.74
snR78	snR78	AAC3	P18238	307 aa		4.2	□□□□□ -1.74
snR78	snR78	MDG1	P53885	366 aa		4.2	□□□□□ -1.74
snR78	snR78	PEX25	Q02969	394 aa		4.2	□□□□□ -1.74
snR78	snR78	HER2	Q03557	464 aa		4.2	□□□□□ -1.74
snR78	snR78	YCR041W	P37265	110 aa		4.19	□□□□□ -1.74
snR78	snR78	SSN8	P47821	323 aa		4.19	□□□□□ -1.74
snR78	snR78	YDR239C	Q03780	787 aa		4.19	□□□□□ -1.74
snR78	snR78	YDR056C	Q12025	205 aa		4.19	□□□□□ -1.74
snR78	snR78	SEC39	Q12745	709 aa		4.19	□□□□□ -1.74
snR78	snR78	MNS1	P32906	549 aa		4.18	□□□□□ -1.74
snR78	snR78	YBR225W	P38321	900 aa		4.18	□□□□□ -1.74
snR78	snR78	MST28	P39552	234 aa		4.18	□□□□□ -1.74
snR78	snR78	LAM5	P43560	674 aa		4.18	□□□□□ -1.74
snR78	snR78	YGL108C	P53139	140 aa		4.18	□□□□□ -1.74
snR78	snR78	CST26	P38226	397 aa		4.17	□□□□□ -1.74
snR78	snR78	PCP1	P53259	346 aa		4.17	□□□□□ -1.74
snR78	snR78	NCS2	P53923	493 aa	Predicted RBP	4.17	□□□□□ -1.74
snR78	snR78	RAD61	Q99359	647 aa		4.17	□□□□□ -1.74
snR78	snR78	OLE1	P21147	510 aa	Known RBP	4.16	□□□□□ -1.74
snR78	snR78	UTH1	P36135	365 aa		4.16	□□□□□ -1.74
snR78	snR78	THI2	P38141	450 aa		4.16	□□□□□ -1.74
snR78	snR78	RMD8	P43620	662 aa		4.16	□□□□□ -1.74
snR78	snR78	UPF3	P48412	387 aa	Known RBP	4.16	□□□□□ -1.74
snR78	snR78	YIP1	P53039	248 aa		4.16	□□□□□ -1.74
snR78	snR78	VPS75	P53853	264 aa		4.16	□□□□□ -1.74
snR78	snR78	APJ1	P53940	528 aa		4.16	□□□□□ -1.74
snR78	snR78	HAL1	Q01766	294 aa		4.16	□□□□□ -1.74
snR78	snR78	IOC4	Q04213	475 aa		4.16	□□□□□ -1.74
snR78	snR78	PKH2	Q12236	1081 aa	Known RBP	4.16	□□□□□ -1.74
snR78	snR78	ATP10	P18496	279 aa		4.15	□□□□□ -1.75
snR78	snR78	RSN1	Q03516	953 aa		4.15	□□□□□ -1.75
snR78	snR78	RHO2	P06781	192 aa		4.14	□□□□□ -1.75
snR78	snR78	RPS8A	P0CX39	200 aa	Known RBP	4.14	□□□□□ -1.75
snR78	snR78	RPS8B	P0CX40	200 aa	Known RBP	4.14	□□□□□ -1.75
snR78	snR78	PCL1	P24867	279 aa		4.14	□□□□□ -1.75
snR78	snR78	TIP1	P27654	210 aa	Predicted RBP	4.14	□□□□□ -1.75
snR78	snR78	REC114	P32841	428 aa		4.14	□□□□□ -1.75
snR78	snR78	MSG5	P38590	489 aa		4.14	□□□□□ -1.75
snR78	snR78	VID27	P40157	782 aa		4.14	□□□□□ -1.75
snR78	snR78	MET28	P40573	187 aa		4.14	□□□□□ -1.75
snR78	snR78	HXT11	P54862	567 aa		4.14	□□□□□ -1.75
snR78	snR78	TIM18	Q08749	192 aa		4.14	□□□□□ -1.75
snR78	snR78	RRD2	Q12461	358 aa		4.14	□□□□□ -1.75
snR78	snR78	GCN4	P03069	281 aa		4.13	□□□□□ -1.75
snR78	snR78	AFG1	P32317	509 aa		4.13	□□□□□ -1.75
snR78	snR78	GYP6	P32806	458 aa		4.13	□□□□□ -1.75
snR78	snR78	TWF1	P53250	332 aa		4.13	□□□□□ -1.75
snR78	snR78	DSL1	P53847	754 aa		4.13	□□□□□ -1.75
snR78	snR78	CWC25	P53854	179 aa	Known RBP	4.13	□□□□□ -1.75
snR78	snR78	PPM1	Q04081	328 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms