RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	MF(ALPHA)1	P01149	165 aa		0.43	□□□□□ -2.34
snR48	snR48	CYC3	P06182	269 aa		0.43	□□□□□ -2.34
snR48	snR48	CBP6	P07253	162 aa	Predicted RBP	0.43	□□□□□ -2.34
snR48	snR48	SLY1	P22213	666 aa		0.43	□□□□□ -2.34
snR48	snR48	RPI1	P23250	407 aa	Known RBP	0.43	□□□□□ -2.34
snR48	snR48	PTP2	P29461	750 aa		0.43	□□□□□ -2.34
snR48	snR48	SSE2	P32590	693 aa	Known RBP	0.43	□□□□□ -2.34
snR48	snR48	MUD1	P32605	298 aa	Known RBP	0.43	□□□□□ -2.34
snR48	snR48	YME2	P32843	850 aa		0.43	□□□□□ -2.34
snR48	snR48	PTK1	P36002	662 aa	Predicted RBP	0.43	□□□□□ -2.34
snR48	snR48	MAL33	P38157	468 aa		0.43	□□□□□ -2.34
snR48	snR48	RTC2	P38279	296 aa		0.43	□□□□□ -2.34
snR48	snR48	YHL041W	P38730	149 aa		0.43	□□□□□ -2.34
snR48	snR48	MST28	P39552	234 aa		0.43	□□□□□ -2.34
snR48	snR48	SSN8	P47821	323 aa		0.43	□□□□□ -2.34
snR48	snR48	RRT6	P53117	311 aa	Predicted RBP	0.43	□□□□□ -2.34
snR48	snR48	PAP2	P53632	584 aa	Known RBP	0.43	□□□□□ -2.34
snR48	snR48	TOF2	Q02208	771 aa		0.43	□□□□□ -2.34
snR48	snR48	COQ9	Q05779	260 aa		0.43	□□□□□ -2.34
snR48	snR48	SNX3	Q08826	162 aa	Known RBP	0.43	□□□□□ -2.34
snR48	snR48	PLP2	Q12017	286 aa		0.43	□□□□□ -2.34
snR48	snR48	RRD2	Q12461	358 aa		0.43	□□□□□ -2.34
snR48	snR48	TMA7	Q3E764	64 aa	Known RBP	0.43	□□□□□ -2.34
snR48	snR48	ARD1	P07347	238 aa	Predicted RBP	0.42	□□□□□ -2.34
snR48	snR48	MTF2	P10849	440 aa		0.42	□□□□□ -2.34
snR48	snR48	YEF3	P16521	1044 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	EST1	P17214	699 aa	Predicted RBP	0.42	□□□□□ -2.34
snR48	snR48	OLE1	P21147	510 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	AAT2	P23542	418 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	TPS2	P31688	896 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	DPH2	P32461	534 aa		0.42	□□□□□ -2.34
snR48	snR48	PRY2	P36110	329 aa		0.42	□□□□□ -2.34
snR48	snR48	YPT35	P38815	214 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	DLD2	P46681	530 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	APT1	P49435	187 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	YPS5	P53057	165 aa		0.42	□□□□□ -2.34
snR48	snR48	YIP5	P53108	310 aa		0.42	□□□□□ -2.34
snR48	snR48	HEF3	P53978	1044 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	BUD22	Q04347	519 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	RCO1	Q04779	684 aa		0.42	□□□□□ -2.34
snR48	snR48	NDE2	Q07500	545 aa		0.42	□□□□□ -2.34
snR48	snR48	LUC7	Q07508	261 aa	Predicted RBP	0.42	□□□□□ -2.34
snR48	snR48	TRM8	Q12009	286 aa		0.42	□□□□□ -2.34
snR48	snR48	SLF1	Q12034	447 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	PKH2	Q12236	1081 aa	Known RBP	0.42	□□□□□ -2.34
snR48	snR48	SGS1	P35187	1447 aa		0.41	□□□□□ -2.34
snR48	snR48	TOP1	P04786	769 aa		0.41	□□□□□ -2.34
snR48	snR48	PAP1	P29468	568 aa	Known RBP	0.41	□□□□□ -2.34
snR48	snR48	YCR041W	P37265	110 aa		0.41	□□□□□ -2.34
snR48	snR48	YBR137W	P38276	179 aa		0.41	□□□□□ -2.34
snR48	snR48	TRS85	P46944	698 aa		0.41	□□□□□ -2.34
snR48	snR48	AAD10	P47182	288 aa		0.41	□□□□□ -2.34
snR48	snR48	YGL262W	P53054	175 aa		0.41	□□□□□ -2.34
snR48	snR48	IPI3	P53877	555 aa		0.41	□□□□□ -2.34
snR48	snR48	PDS5	Q04264	1277 aa		0.41	□□□□□ -2.34
snR48	snR48	BLS1	Q06071	122 aa		0.41	□□□□□ -2.34
snR48	snR48	TIM18	Q08749	192 aa		0.41	□□□□□ -2.34
snR48	snR48	MRP13	P12686	339 aa		0.4	□□□□□ -2.35
snR48	snR48	MSM1	P22438	575 aa		0.4	□□□□□ -2.35
snR48	snR48	ATP11	P32453	318 aa		0.4	□□□□□ -2.35
snR48	snR48	KAR9	P32526	644 aa		0.4	□□□□□ -2.35
snR48	snR48	CBP4	P37267	147 aa		0.4	□□□□□ -2.35
snR48	snR48	GPI18	P38211	433 aa		0.4	□□□□□ -2.35
snR48	snR48	OXA1	P39952	402 aa		0.4	□□□□□ -2.35
snR48	snR48	SYG1	P40528	902 aa		0.4	□□□□□ -2.35
snR48	snR48	KTR6	P54070	446 aa		0.4	□□□□□ -2.35
snR48	snR48	TPS1	Q00764	495 aa	Known RBP	0.4	□□□□□ -2.35
snR48	snR48	YMR181C	Q03231	154 aa		0.4	□□□□□ -2.35
snR48	snR48	NBP2	Q12163	236 aa		0.4	□□□□□ -2.35
snR48	snR48	APC2	Q12440	853 aa		0.4	□□□□□ -2.35
snR48	snR48	BRR1	Q99177	341 aa	Predicted RBP	0.4	□□□□□ -2.35
snR48	snR48	COR1	P07256	457 aa		0.39	□□□□□ -2.35
snR48	snR48	TIP1	P27654	210 aa	Predicted RBP	0.39	□□□□□ -2.35
snR48	snR48	HIR2	P32480	875 aa		0.39	□□□□□ -2.35
snR48	snR48	ZUO1	P32527	433 aa	Known RBP	0.39	□□□□□ -2.35
snR48	snR48	AUR1	P36107	401 aa	Predicted RBP	0.39	□□□□□ -2.35
snR48	snR48	STP2	P38704	541 aa		0.39	□□□□□ -2.35
snR48	snR48	AIM22	P47051	409 aa		0.39	□□□□□ -2.35
snR48	snR48	BIR1	P47134	954 aa		0.39	□□□□□ -2.35
snR48	snR48	PGU1	P47180	361 aa		0.39	□□□□□ -2.35
snR48	snR48	UPF3	P48412	387 aa	Known RBP	0.39	□□□□□ -2.35
snR48	snR48	TFC6	Q06339	672 aa		0.39	□□□□□ -2.35
snR48	snR48	CTI6	Q08923	506 aa		0.39	□□□□□ -2.35
snR48	snR48	YPR022C	Q12139	1133 aa		0.39	□□□□□ -2.35
snR48	snR48	PRE8	P23639	250 aa		0.38	□□□□□ -2.35
snR48	snR48	YIH1	P25637	258 aa		0.38	□□□□□ -2.35
snR48	snR48	ITR1	P30605	584 aa		0.38	□□□□□ -2.35
snR48	snR48	YGP1	P38616	354 aa	Known RBP	0.38	□□□□□ -2.35
snR48	snR48	WSS1	P38838	269 aa		0.38	□□□□□ -2.35
snR48	snR48	BAT1	P38891	393 aa	Known RBP	0.38	□□□□□ -2.35
snR48	snR48	MBB1	P39534	108 aa		0.38	□□□□□ -2.35
snR48	snR48	ACA1	P39970	489 aa		0.38	□□□□□ -2.35
snR48	snR48	YFR057W	P43625	151 aa		0.38	□□□□□ -2.35
snR48	snR48	MDE1	P47095	244 aa		0.38	□□□□□ -2.35
snR48	snR48	URB2	P47108	1174 aa		0.38	□□□□□ -2.35
snR48	snR48	YIP1	P53039	248 aa		0.38	□□□□□ -2.35
snR48	snR48	LCL3	P53153	274 aa		0.38	□□□□□ -2.35
snR48	snR48	RPN14	P53196	417 aa		0.38	□□□□□ -2.35
snR48	snR48	PEX8	P53248	589 aa		0.38	□□□□□ -2.35
snR48	snR48	CAF130	P53280	1122 aa	Predicted RBP	0.38	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms