RNA–Protein interactions for RNA: YMR162C

DNF3, Transcript of Trans-golgi network aminophospholipid translocase (flippase), yeastyeast

Gene DNF3, Length 4,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNF3YMR162C LCP5P40079 357 aaPredicted RBP1.66□□□□□ -2.14
DNF3YMR162C TIF34P40217 347 aaKnown RBP1.66□□□□□ -2.14
DNF3YMR162C VNX1P42839 908 aa1.66□□□□□ -2.14
DNF3YMR162C YFL054CP43549 646 aa1.66□□□□□ -2.14
DNF3YMR162C RBL2P48606 106 aaKnown RBP1.66□□□□□ -2.14
DNF3YMR162C OGG1P53397 376 aaPredicted RBP1.66□□□□□ -2.14
DNF3YMR162C YNL058CP53947 316 aa1.66□□□□□ -2.14
DNF3YMR162C YLR460CP54007 376 aa1.66□□□□□ -2.14
DNF3YMR162C RPN4Q03465 531 aa1.66□□□□□ -2.14
DNF3YMR162C YDR514CQ04408 483 aa1.66□□□□□ -2.14
DNF3YMR162C LIP2Q06005 328 aa1.66□□□□□ -2.14
DNF3YMR162C NEJ1Q06148 342 aa1.66□□□□□ -2.14
DNF3YMR162C TEN1Q07921 160 aa1.66□□□□□ -2.14
DNF3YMR162C USB1Q12208 290 aaKnown RBP1.66□□□□□ -2.14
DNF3YMR162C RRP42Q12277 265 aaPredicted RBP1.66□□□□□ -2.14
DNF3YMR162C PAR32Q12515 295 aaKnown RBP1.66□□□□□ -2.14
DNF3YMR162C AI5_ALPHAQ9ZZX1 630 aa1.66□□□□□ -2.14
DNF3YMR162C RPL30P14120 105 aaKnown RBP1.65□□□□□ -2.14
DNF3YMR162C AGP1P25376 633 aa1.65□□□□□ -2.14
DNF3YMR162C ZUO1P32527 433 aaKnown RBP1.65□□□□□ -2.14
DNF3YMR162C PDC2P32896 925 aa1.65□□□□□ -2.14
DNF3YMR162C MKS1P34072 584 aa1.65□□□□□ -2.14
DNF3YMR162C DOA1P36037 715 aa1.65□□□□□ -2.14
DNF3YMR162C ALY1P36117 915 aa1.65□□□□□ -2.14
DNF3YMR162C FZO1P38297 855 aa1.65□□□□□ -2.14
DNF3YMR162C URA8P38627 578 aaPredicted RBP1.65□□□□□ -2.14
DNF3YMR162C CKB2P38930 258 aa1.65□□□□□ -2.14
DNF3YMR162C LCL3P53153 274 aa1.65□□□□□ -2.14
DNF3YMR162C PEX8P53248 589 aa1.65□□□□□ -2.14
DNF3YMR162C ERV29P53337 310 aa1.65□□□□□ -2.14
DNF3YMR162C OSH6Q02201 448 aa1.65□□□□□ -2.14
DNF3YMR162C HAS1Q03532 505 aaKnown RBP1.65□□□□□ -2.14
DNF3YMR162C YKU80Q04437 629 aa1.65□□□□□ -2.14
DNF3YMR162C ERB1Q04660 807 aaKnown RBP1.65□□□□□ -2.14
DNF3YMR162C DBP9Q06218 594 aaKnown RBP1.65□□□□□ -2.14
DNF3YMR162C TFC6Q06339 672 aa1.65□□□□□ -2.14
DNF3YMR162C YDL218WQ07629 317 aa1.65□□□□□ -2.14
DNF3YMR162C RDL2Q08742 149 aaKnown RBP1.65□□□□□ -2.14
DNF3YMR162C MRH1Q12117 320 aaPredicted RBP1.65□□□□□ -2.14
DNF3YMR162C RMD5Q12508 421 aa1.65□□□□□ -2.14
DNF3YMR162C IFM1P25038 676 aa1.65□□□□□ -2.15
DNF3YMR162C RPT1P33299 467 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C MSN2P33748 704 aa1.65□□□□□ -2.15
DNF3YMR162C LAG1P38703 411 aa1.65□□□□□ -2.15
DNF3YMR162C SOL3P38858 249 aa1.65□□□□□ -2.15
DNF3YMR162C SSP120P39931 234 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C MAM33P40513 266 aa1.65□□□□□ -2.15
DNF3YMR162C INA22P40576 216 aa1.65□□□□□ -2.15
DNF3YMR162C LSB3P43603 459 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C TY4A-JP47023 414 aa1.65□□□□□ -2.15
DNF3YMR162C RPS7BP48164 190 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C GNP1P48813 663 aa1.65□□□□□ -2.15
DNF3YMR162C KEL2P50090 882 aa1.65□□□□□ -2.15
DNF3YMR162C TWF1P53250 332 aa1.65□□□□□ -2.15
DNF3YMR162C ARE2P53629 642 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C YPL014WQ02606 381 aa1.65□□□□□ -2.15
DNF3YMR162C PET191Q02772 108 aa1.65□□□□□ -2.15
DNF3YMR162C EEB1Q02891 456 aa1.65□□□□□ -2.15
DNF3YMR162C YPL039WQ03080 316 aa1.65□□□□□ -2.15
DNF3YMR162C NGL2Q03264 515 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C RRP17Q04031 235 aaPredicted RBP1.65□□□□□ -2.15
DNF3YMR162C RSA1Q08932 381 aa1.65□□□□□ -2.15
DNF3YMR162C ELG1Q12050 791 aa1.65□□□□□ -2.15
DNF3YMR162C YPR022CQ12139 1133 aa1.65□□□□□ -2.15
DNF3YMR162C BBP1Q12365 385 aa1.65□□□□□ -2.15
DNF3YMR162C CDC8P00572 216 aa1.65□□□□□ -2.15
DNF3YMR162C PDA1P16387 420 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C EST1P17214 699 aaPredicted RBP1.65□□□□□ -2.15
DNF3YMR162C ITR1P30605 584 aa1.65□□□□□ -2.15
DNF3YMR162C ERG1P32476 496 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C HIR2P32480 875 aa1.65□□□□□ -2.15
DNF3YMR162C YOR062CP36025 268 aa1.65□□□□□ -2.15
DNF3YMR162C MRP21P38175 177 aa1.65□□□□□ -2.15
DNF3YMR162C DPB11P47027 764 aaPredicted RBP1.65□□□□□ -2.15
DNF3YMR162C SBH2P52871 88 aa1.65□□□□□ -2.15
DNF3YMR162C RAI1P53063 387 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C NQM1P53228 333 aaPredicted RBP1.65□□□□□ -2.15
DNF3YMR162C YAP1802P53309 568 aa1.65□□□□□ -2.15
DNF3YMR162C RNH70P53331 553 aa1.65□□□□□ -2.15
DNF3YMR162C CUZ1P53899 274 aa1.65□□□□□ -2.15
DNF3YMR162C TEP1P53916 434 aa1.65□□□□□ -2.15
DNF3YMR162C RHO3Q00245 231 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C RSM23Q01163 450 aa1.65□□□□□ -2.15
DNF3YMR162C GIP3Q03016 1276 aa1.65□□□□□ -2.15
DNF3YMR162C RSN1Q03516 953 aa1.65□□□□□ -2.15
DNF3YMR162C SCS7Q03529 384 aa1.65□□□□□ -2.15
DNF3YMR162C ATG16Q03818 150 aa1.65□□□□□ -2.15
DNF3YMR162C YLR345WQ06137 509 aa1.65□□□□□ -2.15
DNF3YMR162C HUA2Q12134 243 aa1.65□□□□□ -2.15
DNF3YMR162C AVL9Q12500 764 aa1.65□□□□□ -2.15
DNF3YMR162C YEL077CQ3E7X8 1277 aa1.65□□□□□ -2.15
DNF3YMR162C TY4A-HQ6Q5P6 413 aa1.65□□□□□ -2.15
DNF3YMR162C ECM29P38737 1868 aa1.65□□□□□ -2.15
DNF3YMR162C RPS14AP06367 137 aaKnown RBP1.65□□□□□ -2.15
DNF3YMR162C TRP4P07285 380 aaPredicted RBP1.65□□□□□ -2.15
DNF3YMR162C TYR1P20049 452 aa1.65□□□□□ -2.15
DNF3YMR162C BUD5P25300 642 aaPredicted RBP1.65□□□□□ -2.15
DNF3YMR162C BUB3P26449 341 aa1.65□□□□□ -2.15
DNF3YMR162C MDH3P32419 343 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
DNF3YMR162C NUP120P35729 1037 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms