RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJR028W	YJR028W	YNL234W	P53857	426 aa		4.41	□□□□□ -1.7
YJR028W	YJR028W	SAM50	P53969	484 aa		4.41	□□□□□ -1.7
YJR028W	YJR028W	YPL107W	Q02873	248 aa		4.41	□□□□□ -1.7
YJR028W	YJR028W	PHO92	Q06390	306 aa		4.41	□□□□□ -1.7
YJR028W	YJR028W	MED2	Q12124	431 aa		4.41	□□□□□ -1.7
YJR028W	YJR028W	NFI1	Q12216	726 aa		4.41	□□□□□ -1.7
YJR028W	YJR028W	HSP42	Q12329	375 aa		4.41	□□□□□ -1.7
YJR028W	YJR028W	RKM5	Q12367	367 aa		4.41	□□□□□ -1.7
YJR028W	YJR028W	COX3	P00420	269 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	YFL068W	P0CX99	160 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	YLL066W-A	P0CY00	160 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	YLL067W-A	P0CY01	160 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	AMD1	P15274	810 aa	Known RBP	4.4	□□□□□ -1.71
YJR028W	YJR028W	BEM1	P29366	551 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	GND1	P38720	489 aa	Known RBP	4.4	□□□□□ -1.71
YJR028W	YJR028W	YMR124W	P39523	943 aa	Known RBP	4.4	□□□□□ -1.71
YJR028W	YJR028W	CSM2	P40465	213 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	SAS2	P40963	338 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
YJR028W	YJR028W	MSS11	Q03825	758 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	YMR087W	Q04299	284 aa		4.4	□□□□□ -1.71
YJR028W	YJR028W	DIS3	Q08162	1001 aa	Known RBP	4.4	□□□□□ -1.71
YJR028W	YJR028W	CUE5	Q08412	411 aa	Known RBP	4.4	□□□□□ -1.71
YJR028W	YJR028W	YLR278C	Q05854	1341 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	ACH1	P32316	526 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	SWH1	P35845	1188 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	ZTA1	P38230	334 aa	Known RBP	4.39	□□□□□ -1.71
YJR028W	YJR028W	EFM2	P38347	419 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	FAU1	P40099	211 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	XBP1	P40489	647 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	POP1	P41812	875 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	GPI1	P53306	609 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	BET4	Q00618	327 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	PRP42	Q03776	544 aa	Known RBP	4.39	□□□□□ -1.71
YJR028W	YJR028W	IVY1	Q04934	453 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	GLO2	Q05584	274 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	AEP3	Q12089	606 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	MTR10	Q99189	972 aa		4.39	□□□□□ -1.71
YJR028W	YJR028W	TY1B-A	O13527	1196 aa	Known RBP	4.38	□□□□□ -1.71
YJR028W	YJR028W	CAR1	P00812	333 aa	Known RBP	4.38	□□□□□ -1.71
YJR028W	YJR028W	SCEI	P03882	235 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	DAP2	P18962	818 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	RHB1	P25378	209 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	MGR1	P25573	417 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	TOA1	P32773	286 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	ECM15	P35195	104 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	ADH5	P38113	351 aa	Known RBP	4.38	□□□□□ -1.71
YJR028W	YJR028W	PCA1	P38360	1216 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	OSH3	P38713	996 aa	Known RBP	4.38	□□□□□ -1.71
YJR028W	YJR028W	MLH1	P38920	769 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	YJR011C	P47086	261 aa	Predicted RBP	4.38	□□□□□ -1.71
YJR028W	YJR028W	MLC1	P53141	149 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	BTN2	P53286	410 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	RHO5	P53879	331 aa	Known RBP	4.38	□□□□□ -1.71
YJR028W	YJR028W	EOS1	P53938	366 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	OCA2	P53949	197 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	YMR254C	Q04838	102 aa		4.38	□□□□□ -1.71
YJR028W	YJR028W	SRV2	P17555	526 aa	Known RBP	4.37	□□□□□ -1.71
YJR028W	YJR028W	BUB3	P26449	341 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	SPC110	P32380	944 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	RPN2	P32565	945 aa	Known RBP	4.37	□□□□□ -1.71
YJR028W	YJR028W	LAS1	P36146	502 aa	Predicted RBP	4.37	□□□□□ -1.71
YJR028W	YJR028W	ASC1	P38011	319 aa	Known RBP	4.37	□□□□□ -1.71
YJR028W	YJR028W	SCO2	P38072	301 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	MMS4	P38257	691 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	YSW1	P38280	609 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	MDV1	P47025	714 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	ATP22	P50273	684 aa	Predicted RBP	4.37	□□□□□ -1.71
YJR028W	YJR028W	TOF1	P53840	1238 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	NCS2	P53923	493 aa	Predicted RBP	4.37	□□□□□ -1.71
YJR028W	YJR028W	HSP31	Q04432	237 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	SYO1	Q07395	620 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	TAD3	Q9URQ3	322 aa		4.37	□□□□□ -1.71
YJR028W	YJR028W	RAD24	P32641	659 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	SOR1	P35497	357 aa	Known RBP	4.36	□□□□□ -1.71
YJR028W	YJR028W	FAD1	P38913	306 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	YTA12	P40341	825 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	YIL152W	P40455	235 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	RPN9	Q04062	393 aa	Known RBP	4.36	□□□□□ -1.71
YJR028W	YJR028W	RBA50	Q04418	439 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	YDR341C	Q05506	607 aa	Known RBP	4.36	□□□□□ -1.71
YJR028W	YJR028W	NDL1	Q06568	189 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	SOR2	Q07786	357 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	MLH2	Q07980	695 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	UBX3	Q12229	455 aa		4.36	□□□□□ -1.71
YJR028W	YJR028W	ADE4	P04046	510 aa	Known RBP	4.35	□□□□□ -1.71
YJR028W	YJR028W	LEU4	P06208	619 aa	Known RBP	4.35	□□□□□ -1.71
YJR028W	YJR028W	MSP1	P28737	362 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	ERG1	P32476	496 aa	Known RBP	4.35	□□□□□ -1.71
YJR028W	YJR028W	FRE1	P32791	686 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	REC114	P32841	428 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	VPS17	P32913	551 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	UIP5	P36137	443 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	DAD2	P36162	133 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	SIF2	P38262	535 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	PCI8	P40512	444 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	TRS85	P46944	698 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	TDA7	P53882	636 aa	Predicted RBP	4.35	□□□□□ -1.71
YJR028W	YJR028W	STP1	Q00947	519 aa		4.35	□□□□□ -1.71
YJR028W	YJR028W	MRPL1	Q04599	285 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms