RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C NRT1Q08485 598 aa5.21□□□□□ -1.58
YIR043CYIR043C PGC1Q08959 321 aa5.21□□□□□ -1.58
YIR043CYIR043C MTR10Q99189 972 aa5.21□□□□□ -1.58
YIR043CYIR043C LEU4P06208 619 aaKnown RBP5.2□□□□□ -1.58
YIR043CYIR043C TPM1P17536 199 aaKnown RBP5.2□□□□□ -1.58
YIR043CYIR043C GLK1P17709 500 aaKnown RBP5.2□□□□□ -1.58
YIR043CYIR043C MDM10P18409 493 aa5.2□□□□□ -1.58
YIR043CYIR043C MGR1P25573 417 aa5.2□□□□□ -1.58
YIR043CYIR043C SIN4P32259 974 aa5.2□□□□□ -1.58
YIR043CYIR043C PRP21P32524 280 aaPredicted RBP5.2□□□□□ -1.58
YIR043CYIR043C SWH1P35845 1188 aa5.2□□□□□ -1.58
YIR043CYIR043C FAD1P38913 306 aa5.2□□□□□ -1.58
YIR043CYIR043C SCD6P45978 349 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
YIR043CYIR043C RHO5P53879 331 aaKnown RBP5.2□□□□□ -1.58
YIR043CYIR043C NCS2P53923 493 aaPredicted RBP5.2□□□□□ -1.58
YIR043CYIR043C STP1Q00947 519 aa5.2□□□□□ -1.58
YIR043CYIR043C CUE5Q08412 411 aaKnown RBP5.2□□□□□ -1.58
YIR043CYIR043C PTP1P25044 335 aa5.19□□□□□ -1.58
YIR043CYIR043C LAS1P36146 502 aaPredicted RBP5.19□□□□□ -1.58
YIR043CYIR043C ZTA1P38230 334 aaKnown RBP5.19□□□□□ -1.58
YIR043CYIR043C GND1P38720 489 aaKnown RBP5.19□□□□□ -1.58
YIR043CYIR043C PCL6P40038 420 aa5.19□□□□□ -1.58
YIR043CYIR043C YGL082WP53155 381 aa5.19□□□□□ -1.58
YIR043CYIR043C TDA7P53882 636 aaPredicted RBP5.19□□□□□ -1.58
YIR043CYIR043C YDR415CQ04033 374 aaPredicted RBP5.19□□□□□ -1.58
YIR043CYIR043C HSP31Q04432 237 aa5.19□□□□□ -1.58
YIR043CYIR043C YLR456WQ06199 204 aa5.19□□□□□ -1.58
YIR043CYIR043C RKM1Q08961 583 aaPredicted RBP5.19□□□□□ -1.58
YIR043CYIR043C KEL3Q08979 651 aaPredicted RBP5.19□□□□□ -1.58
YIR043CYIR043C SKS1Q12505 502 aa5.19□□□□□ -1.58
YIR043CYIR043C YML002WP0CF17 737 aa5.18□□□□□ -1.58
YIR043CYIR043C ARO3P14843 370 aaKnown RBP5.18□□□□□ -1.58
YIR043CYIR043C SEC62P21825 274 aa5.18□□□□□ -1.58
YIR043CYIR043C YCR007CP25354 239 aa5.18□□□□□ -1.58
YIR043CYIR043C ACH1P32316 526 aa5.18□□□□□ -1.58
YIR043CYIR043C VPS17P32913 551 aa5.18□□□□□ -1.58
YIR043CYIR043C SPC34P36131 295 aa5.18□□□□□ -1.58
YIR043CYIR043C OSH3P38713 996 aaKnown RBP5.18□□□□□ -1.58
YIR043CYIR043C CCT2P39076 527 aaKnown RBP5.18□□□□□ -1.58
YIR043CYIR043C VHS2P40463 436 aa5.18□□□□□ -1.58
YIR043CYIR043C MDV1P47025 714 aa5.18□□□□□ -1.58
YIR043CYIR043C YIF1P53845 314 aaKnown RBP5.18□□□□□ -1.58
YIR043CYIR043C DSL1P53847 754 aa5.18□□□□□ -1.58
YIR043CYIR043C BET4Q00618 327 aa5.18□□□□□ -1.58
YIR043CYIR043C PRP42Q03776 544 aaKnown RBP5.18□□□□□ -1.58
YIR043CYIR043C PPM1Q04081 328 aa5.18□□□□□ -1.58
YIR043CYIR043C MRPL1Q04599 285 aa5.18□□□□□ -1.58
YIR043CYIR043C MDM30Q05930 598 aa5.18□□□□□ -1.58
YIR043CYIR043C THI20Q08224 551 aa5.18□□□□□ -1.58
YIR043CYIR043C RKM5Q12367 367 aa5.18□□□□□ -1.58
YIR043CYIR043C PDE2P06776 526 aa5.17□□□□□ -1.58
YIR043CYIR043C SEC63P14906 663 aa5.17□□□□□ -1.58
YIR043CYIR043C KRR1P25586 316 aaPredicted RBP5.17□□□□□ -1.58
YIR043CYIR043C GEX1P25596 615 aa5.17□□□□□ -1.58
YIR043CYIR043C MSP1P28737 362 aa5.17□□□□□ -1.58
YIR043CYIR043C FRE1P32791 686 aa5.17□□□□□ -1.58
YIR043CYIR043C MIC60P36112 540 aa5.17□□□□□ -1.58
YIR043CYIR043C WSS1P38838 269 aa5.17□□□□□ -1.58
YIR043CYIR043C YER130CP39959 443 aa5.17□□□□□ -1.58
YIR043CYIR043C CSM2P40465 213 aa5.17□□□□□ -1.58
YIR043CYIR043C SAS2P40963 338 aa5.17□□□□□ -1.58
YIR043CYIR043C AZF1P41696 914 aa5.17□□□□□ -1.58
YIR043CYIR043C BNA3P47039 444 aaKnown RBP5.17□□□□□ -1.58
YIR043CYIR043C TOM22P49334 152 aa5.17□□□□□ -1.58
YIR043CYIR043C YDR387CQ04162 555 aa5.17□□□□□ -1.58
YIR043CYIR043C LSP1Q12230 341 aaKnown RBP5.17□□□□□ -1.58
YIR043CYIR043C CAR1P00812 333 aaKnown RBP5.16□□□□□ -1.58
YIR043CYIR043C PMR1P13586 950 aa5.16□□□□□ -1.58
YIR043CYIR043C RPI1P23250 407 aaKnown RBP5.16□□□□□ -1.58
YIR043CYIR043C YCP4P25349 247 aaKnown RBP5.16□□□□□ -1.58
YIR043CYIR043C BUB3P26449 341 aa5.16□□□□□ -1.58
YIR043CYIR043C RIM1P32445 135 aaKnown RBP5.16□□□□□ -1.58
YIR043CYIR043C ECM15P35195 104 aa5.16□□□□□ -1.58
YIR043CYIR043C SOR1P35497 357 aaKnown RBP5.16□□□□□ -1.58
YIR043CYIR043C YNK1P36010 153 aaKnown RBP5.16□□□□□ -1.58
YIR043CYIR043C EFM2P38347 419 aa5.16□□□□□ -1.58
YIR043CYIR043C RFC3P38629 340 aa5.16□□□□□ -1.58
YIR043CYIR043C RRP3P38712 501 aaKnown RBP5.16□□□□□ -1.58
YIR043CYIR043C FAU1P40099 211 aa5.16□□□□□ -1.58
YIR043CYIR043C YJR011CP47086 261 aaPredicted RBP5.16□□□□□ -1.58
YIR043CYIR043C SEC5P89102 971 aa5.16□□□□□ -1.58
YIR043CYIR043C MEH1Q02205 184 aa5.16□□□□□ -1.58
YIR043CYIR043C YMR087WQ04299 284 aa5.16□□□□□ -1.58
YIR043CYIR043C YMR254CQ04838 102 aa5.16□□□□□ -1.58
YIR043CYIR043C SOR2Q07786 357 aa5.16□□□□□ -1.58
YIR043CYIR043C UBX3Q12229 455 aa5.16□□□□□ -1.58
YIR043CYIR043C POT1P27796 417 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
YIR043CYIR043C ASC1P38011 319 aaKnown RBP5.15□□□□□ -1.59
YIR043CYIR043C RRN10P38204 145 aa5.15□□□□□ -1.59
YIR043CYIR043C PFF1P38244 976 aa5.15□□□□□ -1.59
YIR043CYIR043C YPT1P01123 206 aaKnown RBP5.14□□□□□ -1.59
YIR043CYIR043C SCEIP03882 235 aa5.14□□□□□ -1.59
YIR043CYIR043C RPL6BP05739 176 aaKnown RBP5.14□□□□□ -1.59
YIR043CYIR043C EXO70P19658 623 aa5.14□□□□□ -1.59
YIR043CYIR043C HNM1P19807 563 aa5.14□□□□□ -1.59
YIR043CYIR043C APE2P32454 952 aaKnown RBP5.14□□□□□ -1.59
YIR043CYIR043C ERG1P32476 496 aaKnown RBP5.14□□□□□ -1.59
YIR043CYIR043C DAD2P36162 133 aa5.14□□□□□ -1.59
YIR043CYIR043C VPS52P39904 641 aa5.14□□□□□ -1.59
YIR043CYIR043C EPL1P43572 832 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms