RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 OST1P41543 476 aaKnown RBP2.26□□□□□ -2.05
snR56snR56 YJR085CP47131 105 aaKnown RBP2.26□□□□□ -2.05
snR56snR56 RIX7Q07844 837 aaKnown RBP2.26□□□□□ -2.05
snR56snR56 RFM1Q12192 310 aa2.26□□□□□ -2.05
snR56snR56 ATP4P05626 244 aa2.25□□□□□ -2.05
snR56snR56 BUB3P26449 341 aa2.25□□□□□ -2.05
snR56snR56 MFT1P33441 392 aaKnown RBP2.25□□□□□ -2.05
snR56snR56 YBR144CP34215 104 aa2.25□□□□□ -2.05
snR56snR56 SHP1P34223 423 aa2.25□□□□□ -2.05
snR56snR56 CHK1P38147 527 aa2.25□□□□□ -2.05
snR56snR56 CHS6P40955 746 aa2.25□□□□□ -2.05
snR56snR56 GAB1P41733 394 aa2.25□□□□□ -2.05
snR56snR56 NCA3P46955 337 aa2.25□□□□□ -2.05
snR56snR56 OGG1P53397 376 aaPredicted RBP2.25□□□□□ -2.05
snR56snR56 THP1Q08231 455 aa2.25□□□□□ -2.05
snR56snR56 YPL272CQ08984 517 aa2.25□□□□□ -2.05
snR56snR56 SSE2P32590 693 aaKnown RBP2.24□□□□□ -2.05
snR56snR56 MRPL10P36520 322 aa2.24□□□□□ -2.05
snR56snR56 BNA4P38169 460 aa2.24□□□□□ -2.05
snR56snR56 YKU80Q04437 629 aa2.24□□□□□ -2.05
snR56snR56 CUE5Q08412 411 aaKnown RBP2.24□□□□□ -2.05
snR56snR56 YPL199CQ08954 240 aa2.24□□□□□ -2.05
snR56snR56 SPS22P25380 463 aa2.23□□□□□ -2.05
snR56snR56 VHS1Q03785 461 aa2.23□□□□□ -2.05
snR56snR56 YPR091CQ06833 770 aa2.23□□□□□ -2.05
snR56snR56 MF(ALPHA)1P01149 165 aa2.22□□□□□ -2.05
snR56snR56 SNF1P06782 633 aaKnown RBP2.22□□□□□ -2.05
snR56snR56 ARD1P07347 238 aaPredicted RBP2.22□□□□□ -2.05
snR56snR56 NFT1P0CE68 1218 aa2.22□□□□□ -2.05
snR56snR56 SEO1P39709 593 aa2.22□□□□□ -2.05
snR56snR56 UTP18P40362 594 aaPredicted RBP2.22□□□□□ -2.05
snR56snR56 ALK1P43633 760 aaKnown RBP2.22□□□□□ -2.05
snR56snR56 MTM1P53320 366 aa2.22□□□□□ -2.05
snR56snR56 ODC1Q03028 310 aa2.22□□□□□ -2.05
snR56snR56 TCO89Q08921 799 aa2.22□□□□□ -2.05
snR56snR56 YPQ1Q12010 308 aa2.22□□□□□ -2.05
snR56snR56 YOL087CQ99247 1116 aa2.22□□□□□ -2.05
snR56snR56 YEF3P16521 1044 aaKnown RBP2.21□□□□□ -2.06
snR56snR56 CWC25P53854 179 aaKnown RBP2.21□□□□□ -2.06
snR56snR56 MDG1P53885 366 aa2.21□□□□□ -2.06
snR56snR56 ECM11Q04110 302 aa2.21□□□□□ -2.06
snR56snR56 VID22Q05934 901 aa2.21□□□□□ -2.06
snR56snR56 PRM7Q12459 698 aa2.21□□□□□ -2.06
snR56snR56 MES1P00958 751 aaKnown RBP2.2□□□□□ -2.06
snR56snR56 SAM1P10659 382 aaKnown RBP2.2□□□□□ -2.06
snR56snR56 SAM2P19358 384 aaKnown RBP2.2□□□□□ -2.06
snR56snR56 YCR100CP25606 316 aa2.2□□□□□ -2.06
snR56snR56 YHR131CP38835 850 aa2.2□□□□□ -2.06
snR56snR56 COQ9Q05779 260 aa2.2□□□□□ -2.06
snR56snR56 LUC7Q07508 261 aaPredicted RBP2.2□□□□□ -2.06
snR56snR56 UBP11P36026 717 aa2.19□□□□□ -2.06
snR56snR56 MAL33P38157 468 aa2.19□□□□□ -2.06
snR56snR56 ZPR1P53303 486 aaKnown RBP2.19□□□□□ -2.06
snR56snR56 IRC25Q07951 179 aa2.19□□□□□ -2.06
snR56snR56 NBP2Q12163 236 aa2.19□□□□□ -2.06
snR56snR56 YBR225WP38321 900 aa2.18□□□□□ -2.06
snR56snR56 SSU1P41930 458 aa2.18□□□□□ -2.06
snR56snR56 HEF3P53978 1044 aaKnown RBP2.18□□□□□ -2.06
snR56snR56 HXT11P54862 567 aa2.18□□□□□ -2.06
snR56snR56 TOF2Q02208 771 aa2.18□□□□□ -2.06
snR56snR56 SNO4Q04902 237 aa2.18□□□□□ -2.06
snR56snR56 HSP33Q08914 237 aaKnown RBP2.18□□□□□ -2.06
snR56snR56 HSP32Q08992 237 aa2.18□□□□□ -2.06
snR56snR56 ART10P18634 518 aaKnown RBP2.17□□□□□ -2.06
snR56snR56 RAD61Q99359 647 aa2.17□□□□□ -2.06
snR56snR56 ELO2P25358 347 aa2.16□□□□□ -2.06
snR56snR56 AUR1P36107 401 aaPredicted RBP2.16□□□□□ -2.06
snR56snR56 RIB5P38145 238 aa2.16□□□□□ -2.06
snR56snR56 ISC1P40015 477 aaKnown RBP2.16□□□□□ -2.06
snR56snR56 TRS85P46944 698 aa2.16□□□□□ -2.06
snR56snR56 AIM22P47051 409 aa2.16□□□□□ -2.06
snR56snR56 MRP51Q02950 344 aa2.16□□□□□ -2.06
snR56snR56 SSP2Q08646 371 aa2.16□□□□□ -2.06
snR56snR56 TRP1P00912 224 aa2.15□□□□□ -2.07
snR56snR56 MRP13P12686 339 aa2.15□□□□□ -2.07
snR56snR56 MRPS9P38120 278 aa2.15□□□□□ -2.07
snR56snR56 YER010CP40011 234 aa2.15□□□□□ -2.07
snR56snR56 SIP4P46954 829 aa2.15□□□□□ -2.07
snR56snR56 CBK1P53894 756 aa2.15□□□□□ -2.07
snR56snR56 ATP11P32453 318 aa2.14□□□□□ -2.07
snR56snR56 NPL6P32832 435 aa2.14□□□□□ -2.07
snR56snR56 BUD22Q04347 519 aaKnown RBP2.14□□□□□ -2.07
snR56snR56 NYV1Q12255 253 aa2.14□□□□□ -2.07
snR56snR56 YAR066WP0CX18 203 aa2.13□□□□□ -2.07
snR56snR56 YHR214WP0CX19 203 aa2.13□□□□□ -2.07
snR56snR56 YIH1P25637 258 aa2.13□□□□□ -2.07
snR56snR56 ARA1P38115 344 aa2.13□□□□□ -2.07
snR56snR56 MST28P39552 234 aa2.13□□□□□ -2.07
snR56snR56 AIM10P39965 576 aaKnown RBP2.13□□□□□ -2.07
snR56snR56 HST1P53685 503 aa2.13□□□□□ -2.07
snR56snR56 PRP2P20095 876 aaPredicted RBP2.12□□□□□ -2.07
snR56snR56 DBF20P32328 564 aa2.12□□□□□ -2.07
snR56snR56 PNG1Q02890 363 aa2.12□□□□□ -2.07
snR56snR56 RAD30Q04049 632 aa2.12□□□□□ -2.07
snR56snR56 AIM32Q04689 311 aa2.12□□□□□ -2.07
snR56snR56 FMP40Q08968 688 aaPredicted RBP2.12□□□□□ -2.07
snR56snR56 SPE4Q12455 300 aa2.12□□□□□ -2.07
snR56snR56 SGS1P35187 1447 aa2.11□□□□□ -2.07
snR56snR56 POP5P28005 173 aa2.11□□□□□ -2.07
snR56snR56 YBR137WP38276 179 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms