RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	YGR111W	P53265	400 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	ZPR1	P53303	486 aa	Known RBP	1.7	□□□□□ -2.14
RLM1	YPL089C	SMM1	P53720	384 aa	Known RBP	1.7	□□□□□ -2.14
RLM1	YPL089C	ESBP6	P53918	673 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	SLG1	P54867	378 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	BET4	Q00618	327 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	SHR3	Q02774	210 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	DIG1	Q03063	452 aa	Known RBP	1.7	□□□□□ -2.14
RLM1	YPL089C	YMR254C	Q04838	102 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	MCP2	Q06567	569 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	YDL218W	Q07629	317 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	COS7	Q07788	383 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	NRT1	Q08485	598 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	YOR365C	Q08844	703 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	RDR1	Q08904	546 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	SPE3	Q12074	293 aa	Known RBP	1.7	□□□□□ -2.14
RLM1	YPL089C	RAD52	P06778	471 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	SPS4	P09937	338 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	CDC23	P16522	626 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	NIP100	P33420	868 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	THI2	P38141	450 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	DUG2	P38149	878 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	BNA4	P38169	460 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	NTC20	P38302	140 aa	Predicted RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	RRT2	P38332	387 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	RTT107	P38850	1070 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	KEL1	P38853	1164 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	CAJ1	P39101	391 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	PHO90	P39535	881 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	TIF4631	P39935	952 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	VRG4	P40107	337 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	YMR147W	P40218	223 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	SEC28	P40509	296 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	YJL055W	P47044	245 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	FMS1	P50264	508 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	YGL138C	P53122	345 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	CUL3	P53202	744 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	YGR016W	P53209	190 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	SOL4	P53315	255 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	BUD32	P53323	261 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	SKO1	Q02100	647 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	NUP100	Q02629	959 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	PEX25	Q02969	394 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	RRP45	Q05636	305 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	UAF30	Q08747	228 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	APL5	Q08951	932 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	VPS54	Q12071	889 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	EDE1	P34216	1381 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	HIP1	P06775	603 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	RHO2	P06781	192 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	SGV1	P23293	657 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	SNC1	P31109	117 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	MSN2	P33748	704 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	PIM1	P36775	1133 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	SLM4	P38247	162 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	LAG1	P38703	411 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	EFM4	P40516	257 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	URB2	P47108	1174 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	RPT4	P53549	437 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	HOT1	Q03213	719 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	CTL1	Q03220	320 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	ACL4	Q03771	387 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	FMP42	Q04991	504 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	HEL2	Q05580	639 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	MMR1	Q06324	491 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	SSK1	Q07084	712 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	DCI1	Q08558	271 aa		1.69	□□□□□ -2.14
RLM1	YPL089C	RPN5	Q12250	445 aa	Known RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	BRR1	Q99177	341 aa	Predicted RBP	1.69	□□□□□ -2.14
RLM1	YPL089C	RAV1	P47104	1357 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	SUC2	P00724	532 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	GPH1	P06738	902 aa	Known RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	RPL1A	P0CX43	217 aa	Known RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	RPL1B	P0CX44	217 aa	Known RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	SRV2	P17555	526 aa	Known RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	ATP10	P18496	279 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	RPS2	P25443	254 aa	Known RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	FUN19	P28003	413 aa	Predicted RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	LTV1	P34078	463 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	EFM2	P38347	419 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	YHR054C	P38780	354 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	SER3	P40054	469 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	YJR154W	P47181	346 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	ATP22	P50273	684 aa	Predicted RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	OCA1	P50946	238 aa	Predicted RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	RMD9	P53140	646 aa	Known RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	YNL234W	P53857	426 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	YPL014W	Q02606	381 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	EKI1	Q03764	534 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	YDR286C	Q05530	114 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	SMF3	Q12078	473 aa	Predicted RBP	1.68	□□□□□ -2.14
RLM1	YPL089C	RRD2	Q12461	358 aa		1.68	□□□□□ -2.14
RLM1	YPL089C	RIP1	P08067	215 aa		1.67	□□□□□ -2.14
RLM1	YPL089C	SPO7	P18410	259 aa		1.67	□□□□□ -2.14
RLM1	YPL089C	URA4	P20051	364 aa		1.67	□□□□□ -2.14
RLM1	YPL089C	GID7	P25569	745 aa		1.67	□□□□□ -2.14
RLM1	YPL089C	GEX1	P25596	615 aa		1.67	□□□□□ -2.14
RLM1	YPL089C	BRF1	P29056	596 aa		1.67	□□□□□ -2.14
RLM1	YPL089C	PUP2	P32379	260 aa		1.67	□□□□□ -2.14
RLM1	YPL089C	HIR2	P32480	875 aa		1.67	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms